RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PPDPFLQ8WWR9 84 aa-1.51□□□□□ -2.65
SCARNA1-201ENST00000517138 S100A13Q99584 98 aa-1.51□□□□□ -2.65
SCARNA1-201ENST00000517138 C20orf78Q9BR46 151 aa-1.51□□□□□ -2.65
SCARNA1-201ENST00000517138 BATF3Q9NR55 127 aa-1.51□□□□□ -2.65
SCARNA1-201ENST00000517138 CTAGE3PQ8IX95 158 aa-1.52□□□□□ -2.65
SCARNA1-201ENST00000517138 SPTSSBQ8NFR3 76 aa-1.52□□□□□ -2.65
SCARNA1-201ENST00000517138 LZICQ8WZA0 190 aa-1.52□□□□□ -2.65
SCARNA1-201ENST00000517138 MGST2Q99735 147 aa-1.52□□□□□ -2.65
SCARNA1-201ENST00000517138 SPANXDQ9BXN6 97 aa-1.52□□□□□ -2.65
SCARNA1-201ENST00000517138 PAIP2BQ9ULR5 123 aaKnown RBP-1.52□□□□□ -2.65
SCARNA1-201ENST00000517138 SFT2D2O95562 160 aa-1.53□□□□□ -2.65
SCARNA1-201ENST00000517138 COX8AP10176 69 aa-1.53□□□□□ -2.65
SCARNA1-201ENST00000517138 UBE2G1P62253 170 aa-1.53□□□□□ -2.65
SCARNA1-201ENST00000517138 SEC11AP67812 179 aa-1.53□□□□□ -2.65
SCARNA1-201ENST00000517138 TCTE3Q8IZS6 198 aa-1.53□□□□□ -2.65
SCARNA1-201ENST00000517138 SERP2Q8N6R1 65 aa-1.53□□□□□ -2.65
SCARNA1-201ENST00000517138 MAP1LC3B2A6NCE7 125 aa-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 IGIPA6NJ69 53 aa-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 RRAS2P62070 204 aaPredicted RBP-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 LSM3P62310 102 aaKnown RBP-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 SMCO1Q147U7 214 aa-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 TMEM244Q5VVB8 128 aa-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 BRK1Q8WUW1 75 aa-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 AP4S1Q9Y587 144 aa-1.54□□□□□ -2.66
SCARNA1-201ENST00000517138 SFTA2Q6UW10 78 aa-1.55□□□□□ -2.66
SCARNA1-201ENST00000517138 TPT1P8Q9HAU6 139 aa-1.55□□□□□ -2.66
SCARNA1-201ENST00000517138 APOC2P02655 101 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 GCHFRP30047 84 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 ARPC4P59998 168 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 CLLU1Q5K131 121 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 PFDN5Q99471 154 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 HOPXQ9BPY8 73 aaPredicted RBP-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 SPANXCQ9NY87 97 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 SERP1Q9Y6X1 66 aa-1.56□□□□□ -2.66
SCARNA1-201ENST00000517138 LINC00032P0C843 101 aa-1.57□□□□□ -2.66
SCARNA1-201ENST00000517138 TMEM91Q6ZNR0 172 aa-1.57□□□□□ -2.66
SCARNA1-201ENST00000517138 CMC2Q9NRP2 79 aa-1.57□□□□□ -2.66
SCARNA1-201ENST00000517138 TSTD3H0UI37 97 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 H0Y9P7 68 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 CHKB-CPT1BH3BT56 60 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 IGLC3P0DOY3 106 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 RPS25P62851 125 aaKnown RBP-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 PPP3R1P63098 170 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 STX12Q86Y82 276 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 CACFD1Q9UGQ2 172 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 GNG8Q9UK08 70 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 V9GYV3 84 aa-1.58□□□□□ -2.66
SCARNA1-201ENST00000517138 K7EMI3 77 aa-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 UQCRQO14949 82 aa-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 SSBP1Q04837 148 aaKnown RBP-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 MRPL54Q6P161 138 aaKnown RBP-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 LINC00308Q8TCZ7 52 aa-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 IFI27L1Q96BM0 104 aa-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 C12orf57Q99622 126 aa-1.59□□□□□ -2.66
SCARNA1-201ENST00000517138 S100A3P33764 101 aa-1.6□□□□□ -2.67
SCARNA1-201ENST00000517138 Q8N8P6 123 aa-1.6□□□□□ -2.67
SCARNA1-201ENST00000517138 DNAJC15Q9Y5T4 150 aa-1.6□□□□□ -2.67
SCARNA1-201ENST00000517138 A0A1W2PRE2 83 aa-1.61□□□□□ -2.67
SCARNA1-201ENST00000517138 LINC00587B1AMM8 73 aa-1.61□□□□□ -2.67
SCARNA1-201ENST00000517138 RPL13AP3Q6NVV1 102 aa-1.61□□□□□ -2.67
SCARNA1-201ENST00000517138 MYMXA0A1B0GTQ4 84 aa-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 M0R129 80 aa-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 SMIM24O75264 130 aa-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 LEPROTL1O95214 131 aa-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 TMEM170BQ5T4T1 132 aa-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 ANP32BQ92688 251 aaKnown RBP-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 PPP3R2Q96LZ3 170 aa-1.62□□□□□ -2.67
SCARNA1-201ENST00000517138 NREPQ16612 68 aa-1.63□□□□□ -2.67
SCARNA1-201ENST00000517138 SMIM15Q7Z3B0 74 aa-1.63□□□□□ -2.67
SCARNA1-201ENST00000517138 J3QLW9 94 aa-1.64□□□□□ -2.67
SCARNA1-201ENST00000517138 GSKIPQ9P0R6 139 aa-1.64□□□□□ -2.67
SCARNA1-201ENST00000517138 LSM2Q9Y333 95 aaKnown RBP-1.64□□□□□ -2.67
SCARNA1-201ENST00000517138 ATOX1O00244 68 aa-1.65□□□□□ -2.67
SCARNA1-201ENST00000517138 FAM107AO95990 144 aa-1.65□□□□□ -2.67
SCARNA1-201ENST00000517138 PPP1R2P3Q6NXS1 205 aa-1.65□□□□□ -2.67
SCARNA1-201ENST00000517138 MNS1Q8NEH6 495 aa-1.65□□□□□ -2.67
SCARNA1-201ENST00000517138 SAR1AQ9NR31 198 aa-1.65□□□□□ -2.67
SCARNA1-201ENST00000517138 PSENENQ9NZ42 101 aa-1.65□□□□□ -2.67
SCARNA1-201ENST00000517138 TMEM218A2RU14 115 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 ARPC5O15511 151 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 S100GP29377 79 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 S100A5P33763 92 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 GNG2P59768 71 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 SELENOWP63302 87 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 TMEM167BQ9NRX6 74 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 GID8Q9NWU2 228 aa-1.66□□□□□ -2.68
SCARNA1-201ENST00000517138 A0A1B0GU69 56 aa-1.68□□□□□ -2.68
SCARNA1-201ENST00000517138 H3BQF6 201 aa-1.68□□□□□ -2.68
SCARNA1-201ENST00000517138 CCDC153Q494R4 210 aa-1.68□□□□□ -2.68
SCARNA1-201ENST00000517138 ACBD7Q8N6N7 88 aa-1.68□□□□□ -2.68
SCARNA1-201ENST00000517138 PFDN1O60925 122 aa-1.69□□□□□ -2.68
SCARNA1-201ENST00000517138 HSD52Q0P140 79 aa-1.69□□□□□ -2.68
SCARNA1-201ENST00000517138 A0A1B0GUT8 65 aa-1.7□□□□□ -2.68
SCARNA1-201ENST00000517138 HMGN1P05114 100 aa-1.7□□□□□ -2.68
SCARNA1-201ENST00000517138 TRIQKQ629K1 86 aa-1.7□□□□□ -2.68
SCARNA1-201ENST00000517138 HSPB11Q9Y547 144 aa-1.7□□□□□ -2.68
SCARNA1-201ENST00000517138 SEC11CQ9BY50 192 aa-1.71□□□□□ -2.68
SCARNA1-201ENST00000517138 G0S2P27469 103 aa-1.72□□□□□ -2.68
SCARNA1-201ENST00000517138 SMIM11AP58511 58 aa-1.73□□□□□ -2.69
SCARNA1-201ENST00000517138 S100ZQ8WXG8 99 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms