RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 SPENQ96T58 3664 aaKnown RBP0.51□□□□□ -2.33
MATR3-226ENST00000515833 TEP1Q99973 2627 aaKnown RBP0.51□□□□□ -2.33
MATR3-226ENST00000515833 FRYQ5TBA9 3013 aa0.5□□□□□ -2.33
MATR3-226ENST00000515833 LINC01590Q5TEZ4 76 aa0.5□□□□□ -2.33
MATR3-226ENST00000515833 NBEAQ8NFP9 2946 aa0.5□□□□□ -2.33
MATR3-226ENST00000515833 TGP01266 2768 aa0.5□□□□□ -2.33
MATR3-226ENST00000515833 FAT4Q6V0I7 4981 aa0.49□□□□□ -2.33
MATR3-226ENST00000515833 FASNP49327 2511 aaKnown RBP0.49□□□□□ -2.33
MATR3-226ENST00000515833 MAST4O15021 2626 aa0.49□□□□□ -2.33
MATR3-226ENST00000515833 TLN2Q9Y4G6 2542 aa0.48□□□□□ -2.33
MATR3-226ENST00000515833 ZANQ9Y493 2812 aa0.48□□□□□ -2.33
MATR3-226ENST00000515833 USP9YO00507 2555 aaPredicted RBP0.48□□□□□ -2.33
MATR3-226ENST00000515833 PRCDQ00LT1 54 aa0.48□□□□□ -2.33
MATR3-226ENST00000515833 KRTAP6-2Q3LI66 62 aa0.48□□□□□ -2.33
MATR3-226ENST00000515833 LAMA5O15230 3695 aa0.48□□□□□ -2.33
MATR3-226ENST00000515833 NBPF19A0A087WUL8 3843 aa0.48□□□□□ -2.33
MATR3-226ENST00000515833 PCLOQ9Y6V0 5065 aa0.47□□□□□ -2.33
MATR3-226ENST00000515833 SPART-AS1P0CW21 52 aa0.47□□□□□ -2.33
MATR3-226ENST00000515833 HIVEP1P15822 2718 aa0.47□□□□□ -2.33
MATR3-226ENST00000515833 DNAH10Q8IVF4 4471 aa0.47□□□□□ -2.33
MATR3-226ENST00000515833 MYO18BQ8IUG5 2567 aa0.47□□□□□ -2.33
MATR3-226ENST00000515833 USP9XQ93008 2570 aaPredicted RBP0.46□□□□□ -2.34
MATR3-226ENST00000515833 SPRR2EP22531 72 aa0.45□□□□□ -2.34
MATR3-226ENST00000515833 HMCN2Q8NDA2 5059 aa0.45□□□□□ -2.34
MATR3-226ENST00000515833 MUC2Q02817 5179 aa0.45□□□□□ -2.34
MATR3-226ENST00000515833 SPTBN5Q9NRC6 3674 aaKnown RBP0.45□□□□□ -2.34
MATR3-226ENST00000515833 KMT2DO14686 5537 aa0.44□□□□□ -2.34
MATR3-226ENST00000515833 CRYBG3Q68DQ2 2970 aa0.44□□□□□ -2.34
MATR3-226ENST00000515833 CELSR3Q9NYQ7 3312 aa0.43□□□□□ -2.34
MATR3-226ENST00000515833 STAB2Q8WWQ8 2551 aa0.43□□□□□ -2.34
MATR3-226ENST00000515833 HTTP42858 3142 aa0.42□□□□□ -2.34
MATR3-226ENST00000515833 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
MATR3-226ENST00000515833 LRP2P98164 4655 aa0.42□□□□□ -2.34
MATR3-226ENST00000515833 SPRR2FQ96RM1 72 aa0.42□□□□□ -2.34
MATR3-226ENST00000515833 FAT1Q14517 4588 aa0.42□□□□□ -2.34
MATR3-226ENST00000515833 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
MATR3-226ENST00000515833 KALRNO60229 2985 aa0.41□□□□□ -2.34
MATR3-226ENST00000515833 K7EIM0 57 aa0.41□□□□□ -2.34
MATR3-226ENST00000515833 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
MATR3-226ENST00000515833 MGAM2Q2M2H8 2515 aa0.4□□□□□ -2.34
MATR3-226ENST00000515833 ZFHX4Q86UP3 3567 aa0.4□□□□□ -2.34
MATR3-226ENST00000515833 ITPR3Q14573 2671 aa0.4□□□□□ -2.35
MATR3-226ENST00000515833 KIAA1109Q2LD37 5005 aa0.4□□□□□ -2.35
MATR3-226ENST00000515833 SVEP1Q4LDE5 3571 aa0.4□□□□□ -2.35
MATR3-226ENST00000515833 KRTAP19-5Q3LI72 72 aa0.39□□□□□ -2.35
MATR3-226ENST00000515833 CMYA5Q8N3K9 4069 aa0.38□□□□□ -2.35
MATR3-226ENST00000515833 TTTY10Q9BZA0 68 aa0.38□□□□□ -2.35
MATR3-226ENST00000515833 PLECQ15149 4684 aaKnown RBP0.38□□□□□ -2.35
MATR3-226ENST00000515833 RYR1P21817 5038 aa0.38□□□□□ -2.35
MATR3-226ENST00000515833 CEP250Q9BV73 2442 aa0.37□□□□□ -2.35
MATR3-226ENST00000515833 MAP1AP78559 2803 aaPredicted RBP0.37□□□□□ -2.35
MATR3-226ENST00000515833 MXRA5Q9NR99 2828 aa0.37□□□□□ -2.35
MATR3-226ENST00000515833 SMR3BP02814 79 aaPredicted RBP0.35□□□□□ -2.35
MATR3-226ENST00000515833 TRIOO75962 3097 aa0.35□□□□□ -2.35
MATR3-226ENST00000515833 ITPR1Q14643 2758 aa0.34□□□□□ -2.36
MATR3-226ENST00000515833 WDR87Q6ZQQ6 2873 aa0.33□□□□□ -2.36
MATR3-226ENST00000515833 DNAH17Q9UFH2 4485 aa0.33□□□□□ -2.36
MATR3-226ENST00000515833 NBEAL1Q6ZS30 2694 aa0.33□□□□□ -2.36
MATR3-226ENST00000515833 DYNC1H1Q14204 4646 aaKnown RBP0.33□□□□□ -2.36
MATR3-226ENST00000515833 KMT2CQ8NEZ4 4911 aaKnown RBP0.33□□□□□ -2.36
MATR3-226ENST00000515833 RYR2Q92736 4967 aa0.33□□□□□ -2.36
MATR3-226ENST00000515833 SPTAN1Q13813 2472 aaKnown RBP0.32□□□□□ -2.36
MATR3-226ENST00000515833 SSPOA2VEC9 5147 aa0.32□□□□□ -2.36
MATR3-226ENST00000515833 LAMA1P25391 3075 aa0.32□□□□□ -2.36
MATR3-226ENST00000515833 TMEM167AQ8TBQ9 72 aa0.31□□□□□ -2.36
MATR3-226ENST00000515833 DMXL2Q8TDJ6 3036 aa0.31□□□□□ -2.36
MATR3-226ENST00000515833 CSMD1Q96PZ7 3565 aa0.3□□□□□ -2.36
MATR3-226ENST00000515833 DEFB104AQ8WTQ1 72 aa0.3□□□□□ -2.36
MATR3-226ENST00000515833 DOPEY1Q5JWR5 2465 aa0.3□□□□□ -2.36
MATR3-226ENST00000515833 KRTAP20-1Q3LI63 56 aa0.29□□□□□ -2.36
MATR3-226ENST00000515833 RELNP78509 3460 aa0.29□□□□□ -2.36
MATR3-226ENST00000515833 LAMA3Q16787 3333 aa0.28□□□□□ -2.36
MATR3-226ENST00000515833 RHPN1-AS1Q9BWJ2 59 aa0.28□□□□□ -2.36
MATR3-226ENST00000515833 MGAQ8IWI9 3026 aa0.28□□□□□ -2.36
MATR3-226ENST00000515833 MUC17Q685J3 4493 aa0.28□□□□□ -2.37
MATR3-226ENST00000515833 RNF213Q63HN8 5207 aa0.27□□□□□ -2.37
MATR3-226ENST00000515833 H3BSH0 61 aa0.27□□□□□ -2.37
MATR3-226ENST00000515833 H3BUX3 64 aa0.27□□□□□ -2.37
MATR3-226ENST00000515833 TRRAPQ9Y4A5 3859 aa0.27□□□□□ -2.37
MATR3-226ENST00000515833 HERC1Q15751 4861 aa0.26□□□□□ -2.37
MATR3-226ENST00000515833 DNAH5Q8TE73 4624 aa0.26□□□□□ -2.37
MATR3-226ENST00000515833 ADGRG4Q8IZF6 3080 aa0.25□□□□□ -2.37
MATR3-226ENST00000515833 DEFB1P60022 68 aa0.25□□□□□ -2.37
MATR3-226ENST00000515833 CFAP54Q96N23 3096 aa0.25□□□□□ -2.37
MATR3-226ENST00000515833 ABCA13Q86UQ4 5058 aa0.25□□□□□ -2.37
MATR3-226ENST00000515833 TEX15Q9BXT5 2789 aa0.24□□□□□ -2.37
MATR3-226ENST00000515833 EPPK1P58107 5090 aaKnown RBP0.22□□□□□ -2.37
MATR3-226ENST00000515833 MT1HP80294 61 aa0.22□□□□□ -2.37
MATR3-226ENST00000515833 DEFB136Q30KP8 78 aa0.22□□□□□ -2.37
MATR3-226ENST00000515833 C5orf42Q9H799 3197 aa0.21□□□□□ -2.38
MATR3-226ENST00000515833 HYDINQ4G0P3 5121 aa0.21□□□□□ -2.38
MATR3-226ENST00000515833 ATMQ13315 3056 aa0.19□□□□□ -2.38
MATR3-226ENST00000515833 DEFB124Q8NES8 71 aa0.19□□□□□ -2.38
MATR3-226ENST00000515833 CFAP46Q8IYW2 2715 aa0.19□□□□□ -2.38
MATR3-226ENST00000515833 RYR3Q15413 4870 aa0.19□□□□□ -2.38
MATR3-226ENST00000515833 WDFY4Q6ZS81 3184 aa0.18□□□□□ -2.38
MATR3-226ENST00000515833 MT1EP04732 61 aa0.18□□□□□ -2.38
MATR3-226ENST00000515833 ITPR2Q14571 2701 aa0.18□□□□□ -2.38
MATR3-226ENST00000515833 SMG1Q96Q15 3661 aaKnown RBP0.17□□□□□ -2.38
MATR3-226ENST00000515833 STARD9Q9P2P6 4700 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms