RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 LINC00158P58513 81 aa1.12□□□□□ -2.23
HERC4-215ENST00000515753 PRLHP81277 87 aa1.12□□□□□ -2.23
HERC4-215ENST00000515753 IFI27L1Q96BM0 104 aa1.12□□□□□ -2.23
HERC4-215ENST00000515753 KCNQ1DNQ9H478 68 aa1.12□□□□□ -2.23
HERC4-215ENST00000515753 LINC00846Q9NV44 126 aa1.12□□□□□ -2.23
HERC4-215ENST00000515753 MYMXA0A1B0GTQ4 84 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 NCR3O14931 201 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 IGLC3P0DOY3 106 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 TMEM170BQ5T4T1 132 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 LINC00575Q6W349 94 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 COX6B2Q6YFQ2 88 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 Q6ZQY7 126 aa1.11□□□□□ -2.23
HERC4-215ENST00000515753 TRBV10-3A0A0K0K1G6 114 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 LOC101927531A0A1B0GV80 90 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 LINC01546A6NGU7 62 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 ZNF815PA8K554 130 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 SPINK8P0C7L1 97 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 SMIM6P0DI80 62 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 NPC2P61916 151 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 S100A7L2Q5SY68 101 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 C9orf153Q5TBE3 101 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 Q6ZRX8 168 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 GTF2H5Q6ZYL4 71 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 BAGE3Q86Y29 109 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 PRO1933Q9H354 126 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 LPAP08519 4548 aa1.1□□□□□ -2.23
HERC4-215ENST00000515753 FAT4Q6V0I7 4981 aa1.09□□□□□ -2.23
HERC4-215ENST00000515753 MUC17Q685J3 4493 aa1.09□□□□□ -2.23
HERC4-215ENST00000515753 SPRR1BP22528 89 aa1.09□□□□□ -2.23
HERC4-215ENST00000515753 MT1HP80294 61 aa1.09□□□□□ -2.23
HERC4-215ENST00000515753 MUC2Q02817 5179 aa1.09□□□□□ -2.24
HERC4-215ENST00000515753 SMIM13P0DJ93 91 aa1.08□□□□□ -2.24
HERC4-215ENST00000515753 IFITM1P13164 125 aa1.08□□□□□ -2.24
HERC4-215ENST00000515753 PLNP26678 52 aa1.08□□□□□ -2.24
HERC4-215ENST00000515753 RPL37P61927 97 aaKnown RBP1.08□□□□□ -2.24
HERC4-215ENST00000515753 HSD52Q0P140 79 aa1.08□□□□□ -2.24
HERC4-215ENST00000515753 SVBPQ8N300 66 aa1.08□□□□□ -2.24
HERC4-215ENST00000515753 TMEM218A2RU14 115 aa1.07□□□□□ -2.24
HERC4-215ENST00000515753 F8WEM9 126 aa1.07□□□□□ -2.24
HERC4-215ENST00000515753 KLKP1Q107X0 134 aa1.07□□□□□ -2.24
HERC4-215ENST00000515753 SPTSSBQ8NFR3 76 aa1.07□□□□□ -2.24
HERC4-215ENST00000515753 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
HERC4-215ENST00000515753 FSIP2Q5CZC0 6907 aa1.07□□□□□ -2.24
HERC4-215ENST00000515753 TRAV13-2A0A0B4J235 113 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 HCG22E2RYF7 251 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 LEPROTL1O95214 131 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 COX7BP24311 80 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 ATP5EP56381 51 aaPredicted RBP1.06□□□□□ -2.24
HERC4-215ENST00000515753 RBM3P98179 157 aaKnown RBP1.06□□□□□ -2.24
HERC4-215ENST00000515753 Q6JHZ5 121 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 C18orf32Q8TCD1 76 aa1.06□□□□□ -2.24
HERC4-215ENST00000515753 IGLV5-48A0A075B6I7 105 aa1.05□□□□□ -2.24
HERC4-215ENST00000515753 ELOF1P60002 83 aaKnown RBP1.05□□□□□ -2.24
HERC4-215ENST00000515753 KRTAP19-2Q3LHN2 52 aa1.05□□□□□ -2.24
HERC4-215ENST00000515753 C20orf197Q8N268 126 aa1.05□□□□□ -2.24
HERC4-215ENST00000515753 DEFB105AQ8NG35 78 aa1.05□□□□□ -2.24
HERC4-215ENST00000515753 DSCR8Q96T75 97 aa1.05□□□□□ -2.24
HERC4-215ENST00000515753 CYP4F30PQ9H0H9 118 aa1.05□□□□□ -2.24
HERC4-215ENST00000515753 LINC00308Q8TCZ7 52 aa1.04□□□□□ -2.24
HERC4-215ENST00000515753 TRBV7-7A0A0K0K1E9 115 aa1.03□□□□□ -2.24
HERC4-215ENST00000515753 PMCHL1Q16048 86 aa1.03□□□□□ -2.24
HERC4-215ENST00000515753 Q96NJ1 140 aa1.03□□□□□ -2.24
HERC4-215ENST00000515753 SNHG12Q9BXW3 62 aa1.03□□□□□ -2.24
HERC4-215ENST00000515753 A0A1W2PPM0 123 aa1.02□□□□□ -2.25
HERC4-215ENST00000515753 hADV29S1A0JD25 119 aa1.02□□□□□ -2.25
HERC4-215ENST00000515753 APOC3P02656 99 aa1.02□□□□□ -2.25
HERC4-215ENST00000515753 C3orf79P0CE67 100 aa1.02□□□□□ -2.25
HERC4-215ENST00000515753 BVES-AS1Q5T3Y7 98 aa1.02□□□□□ -2.25
HERC4-215ENST00000515753 H0YGX0 51 aa1.01□□□□□ -2.25
HERC4-215ENST00000515753 SYS1-DBNDD2H3BUS1 97 aa1.01□□□□□ -2.25
HERC4-215ENST00000515753 M0R143 59 aa1.01□□□□□ -2.25
HERC4-215ENST00000515753 KRTAP19-6Q3LI70 58 aa1□□□□□ -2.25
HERC4-215ENST00000515753 MUSTN1Q8IVN3 82 aa1□□□□□ -2.25
HERC4-215ENST00000515753 SMIM11BQ8TCY0 68 aa1□□□□□ -2.25
HERC4-215ENST00000515753 PLAC4Q8WY50 150 aa1□□□□□ -2.25
HERC4-215ENST00000515753 PMCHL2Q9BQD1 86 aa1□□□□□ -2.25
HERC4-215ENST00000515753 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
HERC4-215ENST00000515753 NDUFB1O75438 58 aa0.99□□□□□ -2.25
HERC4-215ENST00000515753 MT2AP02795 61 aa0.99□□□□□ -2.25
HERC4-215ENST00000515753 TRBV7-4A0A0J9YYF1 115 aa0.98□□□□□ -2.25
HERC4-215ENST00000515753 WFDC13Q8IUB5 93 aa0.98□□□□□ -2.25
HERC4-215ENST00000515753 MT1FP04733 61 aa0.97□□□□□ -2.25
HERC4-215ENST00000515753 COX6CP09669 75 aa0.97□□□□□ -2.25
HERC4-215ENST00000515753 SPINK7P58062 85 aa0.97□□□□□ -2.25
HERC4-215ENST00000515753 KRTDAPP60985 99 aa0.97□□□□□ -2.25
HERC4-215ENST00000515753 H3BUT2 72 aa0.96□□□□□ -2.26
HERC4-215ENST00000515753 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
HERC4-215ENST00000515753 COL5A1-AS1Q5SY13 56 aa0.96□□□□□ -2.26
HERC4-215ENST00000515753 LINC00472Q9H8W2 130 aa0.96□□□□□ -2.26
HERC4-215ENST00000515753 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
HERC4-215ENST00000515753 KRTAP20-1Q3LI63 56 aa0.95□□□□□ -2.26
HERC4-215ENST00000515753 Q5VV11 94 aa0.95□□□□□ -2.26
HERC4-215ENST00000515753 HIGD1BQ9P298 99 aa0.95□□□□□ -2.26
HERC4-215ENST00000515753 PRO1854Q9UHT4 67 aa0.95□□□□□ -2.26
HERC4-215ENST00000515753 COX8AP10176 69 aa0.94□□□□□ -2.26
HERC4-215ENST00000515753 ACYP2P14621 99 aa0.94□□□□□ -2.26
HERC4-215ENST00000515753 CRIPTQ9P021 101 aa0.94□□□□□ -2.26
HERC4-215ENST00000515753 SSPOA2VEC9 5147 aa0.93□□□□□ -2.26
HERC4-215ENST00000515753 NEBP20929 6669 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms