RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SMARCA2P51531 1590 aa-1.17□□□□□ -2.6
HMGCS1-207ENST00000514610 MYO5CQ9NQX4 1742 aa-1.17□□□□□ -2.6
HMGCS1-207ENST00000514610 CSMD1Q96PZ7 3565 aa-1.17□□□□□ -2.6
HMGCS1-207ENST00000514610 M0QZ58 72 aa-1.17□□□□□ -2.6
HMGCS1-207ENST00000514610 SRCAPQ6ZRS2 3230 aa-1.17□□□□□ -2.6
HMGCS1-207ENST00000514610 CDC42BPGQ6DT37 1551 aa-1.18□□□□□ -2.6
HMGCS1-207ENST00000514610 A8MTW9 85 aa-1.19□□□□□ -2.6
HMGCS1-207ENST00000514610 SFTA3P0C7M3 94 aa-1.19□□□□□ -2.6
HMGCS1-207ENST00000514610 MROH1Q8NDA8 1641 aa-1.19□□□□□ -2.6
HMGCS1-207ENST00000514610 ASXL1Q8IXJ9 1541 aa-1.2□□□□□ -2.6
HMGCS1-207ENST00000514610 K7EMI3 77 aa-1.2□□□□□ -2.6
HMGCS1-207ENST00000514610 M0QY20 66 aa-1.2□□□□□ -2.6
HMGCS1-207ENST00000514610 ITPR2Q14571 2701 aa-1.2□□□□□ -2.6
HMGCS1-207ENST00000514610 CEP295Q9C0D2 2601 aa-1.21□□□□□ -2.6
HMGCS1-207ENST00000514610 MYO9AB2RTY4 2548 aa-1.21□□□□□ -2.6
HMGCS1-207ENST00000514610 ADGRG4Q8IZF6 3080 aa-1.22□□□□□ -2.61
HMGCS1-207ENST00000514610 SPTAN1Q13813 2472 aaKnown RBP-1.23□□□□□ -2.61
HMGCS1-207ENST00000514610 TIAM1Q13009 1591 aa-1.23□□□□□ -2.61
HMGCS1-207ENST00000514610 MGAQ8IWI9 3026 aa-1.24□□□□□ -2.61
HMGCS1-207ENST00000514610 MADDQ8WXG6 1647 aa-1.24□□□□□ -2.61
HMGCS1-207ENST00000514610 DUOX2Q9NRD8 1548 aa-1.25□□□□□ -2.61
HMGCS1-207ENST00000514610 HILPDAQ9Y5L2 63 aa-1.25□□□□□ -2.61
HMGCS1-207ENST00000514610 LINC01546A6NGU7 62 aa-1.26□□□□□ -2.61
HMGCS1-207ENST00000514610 GLI2P10070 1586 aa-1.26□□□□□ -2.61
HMGCS1-207ENST00000514610 EYSQ5T1H1 3165 aa-1.26□□□□□ -2.61
HMGCS1-207ENST00000514610 CFAP46Q8IYW2 2715 aa-1.27□□□□□ -2.61
HMGCS1-207ENST00000514610 GNG13Q9P2W3 67 aa-1.27□□□□□ -2.61
HMGCS1-207ENST00000514610 ABCA9Q8IUA7 1624 aa-1.27□□□□□ -2.61
HMGCS1-207ENST00000514610 UGGT2Q9NYU1 1516 aa-1.28□□□□□ -2.61
HMGCS1-207ENST00000514610 MT1GP13640 62 aa-1.28□□□□□ -2.61
HMGCS1-207ENST00000514610 ABRACLQ9P1F3 81 aa-1.29□□□□□ -2.62
HMGCS1-207ENST00000514610 LINC01549A6NIU2 74 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 PDCD5O14737 125 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 SERF2P84101 59 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 KRTAP19-6Q3LI70 58 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 MT1MQ8N339 61 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 SMCO4Q9NRQ5 59 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 TMEM167BQ9NRX6 74 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 A0A1B0GUL6 1792 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 IQGAP3Q86VI3 1631 aa-1.3□□□□□ -2.62
HMGCS1-207ENST00000514610 CROCC2H7BZ55 1655 aa-1.32□□□□□ -2.62
HMGCS1-207ENST00000514610 SMG1Q96Q15 3661 aaKnown RBP-1.32□□□□□ -2.62
HMGCS1-207ENST00000514610 MT2AP02795 61 aa-1.32□□□□□ -2.62
HMGCS1-207ENST00000514610 SPART-AS1P0CW21 52 aa-1.32□□□□□ -2.62
HMGCS1-207ENST00000514610 MYO15AQ9UKN7 3530 aa-1.32□□□□□ -2.62
HMGCS1-207ENST00000514610 M0R1W7 72 aa-1.34□□□□□ -2.62
HMGCS1-207ENST00000514610 LINC00308Q8TCZ7 52 aa-1.34□□□□□ -2.62
HMGCS1-207ENST00000514610 NMES1Q9C002 83 aa-1.34□□□□□ -2.62
HMGCS1-207ENST00000514610 KAAG1Q9UBP8 84 aa-1.34□□□□□ -2.62
HMGCS1-207ENST00000514610 PREX2Q70Z35 1606 aa-1.34□□□□□ -2.62
HMGCS1-207ENST00000514610 ABCA6Q8N139 1617 aa-1.35□□□□□ -2.63
HMGCS1-207ENST00000514610 SMIM27A0A1W2PRY6 76 aa-1.35□□□□□ -2.63
HMGCS1-207ENST00000514610 MT1BP07438 61 aa-1.35□□□□□ -2.63
HMGCS1-207ENST00000514610 TLN1Q9Y490 2541 aaKnown RBP-1.36□□□□□ -2.63
HMGCS1-207ENST00000514610 DMXL2Q8TDJ6 3036 aa-1.37□□□□□ -2.63
HMGCS1-207ENST00000514610 IGIPA6NJ69 53 aa-1.37□□□□□ -2.63
HMGCS1-207ENST00000514610 FAM208AQ9UK61 1670 aaKnown RBP-1.37□□□□□ -2.63
HMGCS1-207ENST00000514610 EEA1Q15075 1411 aa-1.38□□□□□ -2.63
HMGCS1-207ENST00000514610 ALS2Q96Q42 1657 aa-1.39□□□□□ -2.63
HMGCS1-207ENST00000514610 SCRIBQ14160 1630 aa-1.4□□□□□ -2.63
HMGCS1-207ENST00000514610 CSMD2Q7Z408 3487 aa-1.4□□□□□ -2.63
HMGCS1-207ENST00000514610 KIF21BO75037 1637 aa-1.4□□□□□ -2.63
HMGCS1-207ENST00000514610 EFCAB5A4FU69 1503 aa-1.41□□□□□ -2.64
HMGCS1-207ENST00000514610 H0YGX0 51 aa-1.42□□□□□ -2.64
HMGCS1-207ENST00000514610 WFDC10BQ8IUB3 73 aa-1.42□□□□□ -2.64
HMGCS1-207ENST00000514610 DEFB131AP59861 70 aa-1.44□□□□□ -2.64
HMGCS1-207ENST00000514610 S100ZQ8WXG8 99 aa-1.44□□□□□ -2.64
HMGCS1-207ENST00000514610 DEFB4AO15263 64 aa-1.45□□□□□ -2.64
HMGCS1-207ENST00000514610 EFCAB6Q5THR3 1501 aa-1.45□□□□□ -2.64
HMGCS1-207ENST00000514610 A0A087WWC5 75 aa-1.46□□□□□ -2.64
HMGCS1-207ENST00000514610 LEAP2Q969E1 77 aa-1.46□□□□□ -2.64
HMGCS1-207ENST00000514610 ATMQ13315 3056 aa-1.46□□□□□ -2.64
HMGCS1-207ENST00000514610 BOD1L1Q8NFC6 3051 aa-1.47□□□□□ -2.65
HMGCS1-207ENST00000514610 DEFB136Q30KP8 78 aa-1.48□□□□□ -2.65
HMGCS1-207ENST00000514610 UGGT1Q9NYU2 1555 aa-1.48□□□□□ -2.65
HMGCS1-207ENST00000514610 CFAP54Q96N23 3096 aa-1.48□□□□□ -2.65
HMGCS1-207ENST00000514610 ABCA10Q8WWZ4 1543 aa-1.49□□□□□ -2.65
HMGCS1-207ENST00000514610 POLR2KP53803 58 aaKnown RBP-1.51□□□□□ -2.65
HMGCS1-207ENST00000514610 CCDC180Q9P1Z9 1646 aa-1.51□□□□□ -2.65
HMGCS1-207ENST00000514610 SYCP2Q9BX26 1530 aa-1.52□□□□□ -2.65
HMGCS1-207ENST00000514610 ZFHX4Q86UP3 3567 aa-1.52□□□□□ -2.65
HMGCS1-207ENST00000514610 CRYBG3Q68DQ2 2970 aa-1.53□□□□□ -2.65
HMGCS1-207ENST00000514610 PRUNE2Q8WUY3 3088 aa-1.53□□□□□ -2.65
HMGCS1-207ENST00000514610 FREM2Q5SZK8 3169 aa-1.53□□□□□ -2.65
HMGCS1-207ENST00000514610 VPS13CQ709C8 3753 aa-1.54□□□□□ -2.66
HMGCS1-207ENST00000514610 LMO7Q8WWI1 1683 aa-1.54□□□□□ -2.66
HMGCS1-207ENST00000514610 CPS1P31327 1500 aa-1.54□□□□□ -2.66
HMGCS1-207ENST00000514610 PLNP26678 52 aa-1.57□□□□□ -2.66
HMGCS1-207ENST00000514610 AGLP35573 1532 aa-1.57□□□□□ -2.66
HMGCS1-207ENST00000514610 RPS29P62273 56 aaKnown RBP-1.58□□□□□ -2.66
HMGCS1-207ENST00000514610 SMIM5Q71RC9 77 aa-1.58□□□□□ -2.66
HMGCS1-207ENST00000514610 MROH2AA6NES4 1674 aa-1.59□□□□□ -2.66
HMGCS1-207ENST00000514610 ABCA5Q8WWZ7 1642 aa-1.59□□□□□ -2.66
HMGCS1-207ENST00000514610 MT1FP04733 61 aa-1.6□□□□□ -2.67
HMGCS1-207ENST00000514610 SMIM2Q9BVW6 85 aa-1.61□□□□□ -2.67
HMGCS1-207ENST00000514610 TFF3Q07654 80 aa-1.63□□□□□ -2.67
HMGCS1-207ENST00000514610 TRPM2O94759 1503 aa-1.63□□□□□ -2.67
HMGCS1-207ENST00000514610 PRXQ9BXM0 1461 aa-1.63□□□□□ -2.67
HMGCS1-207ENST00000514610 FRYLO94915 3013 aa-1.64□□□□□ -2.67
HMGCS1-207ENST00000514610 ADCY10Q96PN6 1610 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms