RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
SQSTM1-215ENST00000514093 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
SQSTM1-215ENST00000514093 KRTAP12-2P59991 146 aa8.39□□□□□ -1.07
SQSTM1-215ENST00000514093 A8MUN3 132 aa8.34□□□□□ -1.07
SQSTM1-215ENST00000514093 PLAC4Q8WY50 150 aa8.34□□□□□ -1.07
SQSTM1-215ENST00000514093 H0YAA0 97 aa8.27□□□□□ -1.09
SQSTM1-215ENST00000514093 TSTD3H0UI37 97 aa8.26□□□□□ -1.09
SQSTM1-215ENST00000514093 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
SQSTM1-215ENST00000514093 M0R143 59 aa8.25□□□□□ -1.09
SQSTM1-215ENST00000514093 H3BT86 120 aa8.24□□□□□ -1.09
SQSTM1-215ENST00000514093 CYP4F30PQ9H0H9 118 aa8.23□□□□□ -1.09
SQSTM1-215ENST00000514093 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.1
SQSTM1-215ENST00000514093 NDUFC1O43677 76 aa8.2□□□□□ -1.1
SQSTM1-215ENST00000514093 K7EP34 96 aa8.18□□□□□ -1.1
SQSTM1-215ENST00000514093 DSTQ03001 7570 aaKnown RBP8.17□□□□□ -1.1
SQSTM1-215ENST00000514093 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
SQSTM1-215ENST00000514093 KRTAP4-9Q9BYQ8 210 aa8.12□□□□□ -1.11
SQSTM1-215ENST00000514093 UBL5Q9BZL1 73 aa8.12□□□□□ -1.11
SQSTM1-215ENST00000514093 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
SQSTM1-215ENST00000514093 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
SQSTM1-215ENST00000514093 R4GN34 69 aa8.07□□□□□ -1.12
SQSTM1-215ENST00000514093 BATFQ16520 125 aa8.06□□□□□ -1.12
SQSTM1-215ENST00000514093 LOC101927531A0A1B0GV80 90 aa8.03□□□□□ -1.12
SQSTM1-215ENST00000514093 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
SQSTM1-215ENST00000514093 A0A1W2PPM0 123 aa8□□□□□ -1.13
SQSTM1-215ENST00000514093 C9orf118A6NHY6 69 aa8□□□□□ -1.13
SQSTM1-215ENST00000514093 M0QZ58 72 aa8□□□□□ -1.13
SQSTM1-215ENST00000514093 P0C880 135 aa7.99□□□□□ -1.13
SQSTM1-215ENST00000514093 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
SQSTM1-215ENST00000514093 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
SQSTM1-215ENST00000514093 ACYP1P07311 99 aa7.95□□□□□ -1.14
SQSTM1-215ENST00000514093 SPCS1Q9Y6A9 102 aa7.94□□□□□ -1.14
SQSTM1-215ENST00000514093 TAX1BP3O14907 124 aa7.93□□□□□ -1.14
SQSTM1-215ENST00000514093 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
SQSTM1-215ENST00000514093 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
SQSTM1-215ENST00000514093 H0Y9P7 68 aa7.8□□□□□ -1.16
SQSTM1-215ENST00000514093 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
SQSTM1-215ENST00000514093 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
SQSTM1-215ENST00000514093 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
SQSTM1-215ENST00000514093 PRO0461Q9UI25 63 aa7.76□□□□□ -1.17
SQSTM1-215ENST00000514093 HMCN1Q96RW7 5635 aa7.73□□□□□ -1.17
SQSTM1-215ENST00000514093 ATOX1O00244 68 aa7.73□□□□□ -1.17
SQSTM1-215ENST00000514093 UQCRQO14949 82 aa7.72□□□□□ -1.17
SQSTM1-215ENST00000514093 KRTAP19-3Q7Z4W3 81 aa7.66□□□□□ -1.18
SQSTM1-215ENST00000514093 MT4P47944 62 aa7.65□□□□□ -1.18
SQSTM1-215ENST00000514093 AHNAK2Q8IVF2 5795 aa7.65□□□□□ -1.19
SQSTM1-215ENST00000514093 KRTAP19-7Q3SYF9 63 aa7.64□□□□□ -1.19
SQSTM1-215ENST00000514093 LINC00208Q96KT6 92 aa7.63□□□□□ -1.19
SQSTM1-215ENST00000514093 MT-ATP8P03928 68 aa7.61□□□□□ -1.19
SQSTM1-215ENST00000514093 MT1EP04732 61 aa7.59□□□□□ -1.19
SQSTM1-215ENST00000514093 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
SQSTM1-215ENST00000514093 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
SQSTM1-215ENST00000514093 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
SQSTM1-215ENST00000514093 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
SQSTM1-215ENST00000514093 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
SQSTM1-215ENST00000514093 COL5A1-AS1Q5SY13 56 aa7.5□□□□□ -1.21
SQSTM1-215ENST00000514093 ETDBQ3ZM63 59 aa7.49□□□□□ -1.21
SQSTM1-215ENST00000514093 DMAC1Q96GE9 116 aa7.44□□□□□ -1.22
SQSTM1-215ENST00000514093 MP68P56378 58 aa7.43□□□□□ -1.22
SQSTM1-215ENST00000514093 MT1GP13640 62 aa7.38□□□□□ -1.23
SQSTM1-215ENST00000514093 ATP5EP2Q5VTU8 51 aa7.38□□□□□ -1.23
SQSTM1-215ENST00000514093 F8W1H4 67 aa7.37□□□□□ -1.23
SQSTM1-215ENST00000514093 KRTAP4-6Q9BYQ5 205 aa7.37□□□□□ -1.23
SQSTM1-215ENST00000514093 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
SQSTM1-215ENST00000514093 OCR1Q9BZK8 76 aa7.33□□□□□ -1.24
SQSTM1-215ENST00000514093 KRTAP5-7Q6L8G8 165 aa7.32□□□□□ -1.24
SQSTM1-215ENST00000514093 GTF2H5Q6ZYL4 71 aa7.32□□□□□ -1.24
SQSTM1-215ENST00000514093 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
SQSTM1-215ENST00000514093 KRTAP5-4Q6L8H1 288 aa7.3□□□□□ -1.24
SQSTM1-215ENST00000514093 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
SQSTM1-215ENST00000514093 MT1MQ8N339 61 aa7.29□□□□□ -1.24
SQSTM1-215ENST00000514093 TRAV7A0A075B6U4 112 aa7.24□□□□□ -1.25
SQSTM1-215ENST00000514093 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
SQSTM1-215ENST00000514093 A0A1B0GV90 55 aa7.22□□□□□ -1.25
SQSTM1-215ENST00000514093 KRTAP4-3Q9BYR4 195 aa7.22□□□□□ -1.25
SQSTM1-215ENST00000514093 A0A0D9SG42 100 aa7.2□□□□□ -1.26
SQSTM1-215ENST00000514093 KRTAP13-4Q3LI77 160 aa7.2□□□□□ -1.26
SQSTM1-215ENST00000514093 FAM240AA0A1B0GVK7 77 aa7.19□□□□□ -1.26
SQSTM1-215ENST00000514093 H3BPC8 53 aa7.18□□□□□ -1.26
SQSTM1-215ENST00000514093 SPTSSBQ8NFR3 76 aa7.15□□□□□ -1.26
SQSTM1-215ENST00000514093 ACYP2P14621 99 aa7.14□□□□□ -1.27
SQSTM1-215ENST00000514093 MT1LQ93083 61 aa7.14□□□□□ -1.27
SQSTM1-215ENST00000514093 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
SQSTM1-215ENST00000514093 LINC00643Q86TS7 51 aa7.11□□□□□ -1.27
SQSTM1-215ENST00000514093 CHKB-CPT1BH3BT56 60 aa7.02□□□□□ -1.29
SQSTM1-215ENST00000514093 KRTAP20-2Q3LI61 65 aa6.96□□□□□ -1.3
SQSTM1-215ENST00000514093 SCGB1A1P11684 91 aa6.93□□□□□ -1.3
SQSTM1-215ENST00000514093 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
SQSTM1-215ENST00000514093 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
SQSTM1-215ENST00000514093 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
SQSTM1-215ENST00000514093 J3QR89 54 aa6.82□□□□□ -1.32
SQSTM1-215ENST00000514093 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
SQSTM1-215ENST00000514093 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
SQSTM1-215ENST00000514093 K7ERU9 68 aa6.74□□□□□ -1.33
SQSTM1-215ENST00000514093 KRTAP5-5Q701N2 237 aaPredicted RBP6.73□□□□□ -1.33
SQSTM1-215ENST00000514093 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
SQSTM1-215ENST00000514093 KRTAP12-4P60329 112 aa6.71□□□□□ -1.34
SQSTM1-215ENST00000514093 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
SQSTM1-215ENST00000514093 SNURFQ9Y675 71 aa6.59□□□□□ -1.35
SQSTM1-215ENST00000514093 SERP1Q9Y6X1 66 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms