RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 F8P00451 2351 aa1.6□□□□□ -2.15
PROM1-216ENST00000513946 CELSR2Q9HCU4 2923 aa1.6□□□□□ -2.15
PROM1-216ENST00000513946 CCDC168Q8NDH2 2452 aa1.6□□□□□ -2.15
PROM1-216ENST00000513946 RELNP78509 3460 aa1.6□□□□□ -2.15
PROM1-216ENST00000513946 NIPBLQ6KC79 2804 aaeCLIP1.59□□□□□ -2.15
PROM1-216ENST00000513946 UNC79Q9P2D8 2635 aa1.59□□□□□ -2.15
PROM1-216ENST00000513946 ZNF462Q96JM2 2506 aa1.59□□□□□ -2.15
PROM1-216ENST00000513946 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
PROM1-216ENST00000513946 ITPR3Q14573 2671 aa1.59□□□□□ -2.16
PROM1-216ENST00000513946 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.16
PROM1-216ENST00000513946 HECTD1Q9ULT8 2610 aa1.58□□□□□ -2.16
PROM1-216ENST00000513946 TNP1P09430 55 aa1.58□□□□□ -2.16
PROM1-216ENST00000513946 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
PROM1-216ENST00000513946 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
PROM1-216ENST00000513946 NF1P21359 2839 aa1.58□□□□□ -2.16
PROM1-216ENST00000513946 FLNAP21333 2647 aaKnown RBP1.57□□□□□ -2.16
PROM1-216ENST00000513946 TENM2Q9NT68 2774 aa1.57□□□□□ -2.16
PROM1-216ENST00000513946 Q5VSD8 79 aa1.57□□□□□ -2.16
PROM1-216ENST00000513946 SETD2Q9BYW2 2564 aaPredicted RBP1.57□□□□□ -2.16
PROM1-216ENST00000513946 PDZD2O15018 2839 aa1.55□□□□□ -2.16
PROM1-216ENST00000513946 ZANQ9Y493 2812 aa1.55□□□□□ -2.16
PROM1-216ENST00000513946 NSD1Q96L73 2696 aaPredicted RBP1.54□□□□□ -2.16
PROM1-216ENST00000513946 TEP1Q99973 2627 aaKnown RBP1.54□□□□□ -2.16
PROM1-216ENST00000513946 OTOGQ6ZRI0 2925 aa1.54□□□□□ -2.16
PROM1-216ENST00000513946 FBN2P35556 2912 aa1.53□□□□□ -2.16
PROM1-216ENST00000513946 CSMD2Q7Z408 3487 aa1.53□□□□□ -2.16
PROM1-216ENST00000513946 ZNF469Q96JG9 3925 aaPredicted RBP1.53□□□□□ -2.16
PROM1-216ENST00000513946 C10orf95Q9H7T3 257 aa1.53□□□□□ -2.16
PROM1-216ENST00000513946 VPS13CQ709C8 3753 aa1.53□□□□□ -2.17
PROM1-216ENST00000513946 AKAP9Q99996 3911 aa1.52□□□□□ -2.17
PROM1-216ENST00000513946 NBEAL1Q6ZS30 2694 aa1.52□□□□□ -2.17
PROM1-216ENST00000513946 ATRQ13535 2644 aa1.52□□□□□ -2.17
PROM1-216ENST00000513946 VWFP04275 2813 aa1.51□□□□□ -2.17
PROM1-216ENST00000513946 HIVEP1P15822 2718 aa1.51□□□□□ -2.17
PROM1-216ENST00000513946 ALMS1Q8TCU4 4167 aa1.49□□□□□ -2.17
PROM1-216ENST00000513946 TGP01266 2768 aa1.49□□□□□ -2.17
PROM1-216ENST00000513946 FLG2Q5D862 2391 aaPredicted RBP1.49□□□□□ -2.17
PROM1-216ENST00000513946 SRRM2Q9UQ35 2752 aaKnown RBP1.47□□□□□ -2.17
PROM1-216ENST00000513946 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
PROM1-216ENST00000513946 DMBT1Q9UGM3 2413 aaPredicted RBP1.45□□□□□ -2.18
PROM1-216ENST00000513946 STAB1Q9NY15 2570 aa1.45□□□□□ -2.18
PROM1-216ENST00000513946 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
PROM1-216ENST00000513946 TENM1Q9UKZ4 2725 aa1.45□□□□□ -2.18
PROM1-216ENST00000513946 CUBNO60494 3623 aa1.45□□□□□ -2.18
PROM1-216ENST00000513946 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
PROM1-216ENST00000513946 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
PROM1-216ENST00000513946 PKD1L1Q8TDX9 2849 aa1.44□□□□□ -2.18
PROM1-216ENST00000513946 ANK2Q01484 3957 aa1.44□□□□□ -2.18
PROM1-216ENST00000513946 STAB2Q8WWQ8 2551 aa1.43□□□□□ -2.18
PROM1-216ENST00000513946 MEGF8Q7Z7M0 2845 aa1.41□□□□□ -2.18
PROM1-216ENST00000513946 SMR3BP02814 79 aaPredicted RBP1.41□□□□□ -2.18
PROM1-216ENST00000513946 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
PROM1-216ENST00000513946 TENM3Q9P273 2699 aa1.41□□□□□ -2.18
PROM1-216ENST00000513946 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
PROM1-216ENST00000513946 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
PROM1-216ENST00000513946 MGAM2Q2M2H8 2515 aa1.4□□□□□ -2.19
PROM1-216ENST00000513946 COL7A1Q02388 2944 aa1.39□□□□□ -2.19
PROM1-216ENST00000513946 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
PROM1-216ENST00000513946 TRRAPQ9Y4A5 3859 aa1.38□□□□□ -2.19
PROM1-216ENST00000513946 CMYA5Q8N3K9 4069 aa1.38□□□□□ -2.19
PROM1-216ENST00000513946 DNHD1Q96M86 4753 aa1.37□□□□□ -2.19
PROM1-216ENST00000513946 PRKDCP78527 4128 aaKnown RBP1.36□□□□□ -2.19
PROM1-216ENST00000513946 DNAH3Q8TD57 4116 aa1.35□□□□□ -2.19
PROM1-216ENST00000513946 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
PROM1-216ENST00000513946 DNAH1Q9P2D7 4330 aa1.34□□□□□ -2.19
PROM1-216ENST00000513946 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
PROM1-216ENST00000513946 VPS13DQ5THJ4 4388 aa1.34□□□□□ -2.2
PROM1-216ENST00000513946 KRTAP8-1Q8IUC2 63 aa1.33□□□□□ -2.2
PROM1-216ENST00000513946 CSMD3Q7Z407 3707 aa1.31□□□□□ -2.2
PROM1-216ENST00000513946 SPRR2GQ9BYE4 73 aa1.31□□□□□ -2.2
PROM1-216ENST00000513946 LYSTQ99698 3801 aa1.31□□□□□ -2.2
PROM1-216ENST00000513946 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
PROM1-216ENST00000513946 DNAH7Q8WXX0 4024 aa1.3□□□□□ -2.2
PROM1-216ENST00000513946 MT1HL1P0DM35 61 aa1.29□□□□□ -2.2
PROM1-216ENST00000513946 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
PROM1-216ENST00000513946 FRAS1Q86XX4 4008 aa1.28□□□□□ -2.2
PROM1-216ENST00000513946 HUWE1Q7Z6Z7 4374 aaKnown RBP1.27□□□□□ -2.21
PROM1-216ENST00000513946 M0R2T5 61 aa1.27□□□□□ -2.21
PROM1-216ENST00000513946 HECTD4Q9Y4D8 3996 aa1.27□□□□□ -2.21
PROM1-216ENST00000513946 DYNC2H1Q8NCM8 4307 aaKnown RBP1.26□□□□□ -2.21
PROM1-216ENST00000513946 KMT2CQ8NEZ4 4911 aaKnown RBP1.24□□□□□ -2.21
PROM1-216ENST00000513946 VPS13BQ7Z7G8 4022 aa1.24□□□□□ -2.21
PROM1-216ENST00000513946 DNAH8Q96JB1 4490 aa1.24□□□□□ -2.21
PROM1-216ENST00000513946 DNAH10Q8IVF4 4471 aa1.24□□□□□ -2.21
PROM1-216ENST00000513946 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
PROM1-216ENST00000513946 DNAH6Q9C0G6 4158 aa1.22□□□□□ -2.21
PROM1-216ENST00000513946 DNAH2Q9P225 4427 aa1.21□□□□□ -2.22
PROM1-216ENST00000513946 KRTAP19-8Q3LI54 63 aa1.21□□□□□ -2.22
PROM1-216ENST00000513946 KMT2AQ03164 3969 aa1.21□□□□□ -2.22
PROM1-216ENST00000513946 DNAH17Q9UFH2 4485 aa1.2□□□□□ -2.22
PROM1-216ENST00000513946 RYR3Q15413 4870 aa1.19□□□□□ -2.22
PROM1-216ENST00000513946 STARD9Q9P2P6 4700 aa1.19□□□□□ -2.22
PROM1-216ENST00000513946 PKHD1P08F94 4074 aa1.19□□□□□ -2.22
PROM1-216ENST00000513946 SACSQ9NZJ4 4579 aa1.18□□□□□ -2.22
PROM1-216ENST00000513946 LRP1BQ9NZR2 4599 aa1.18□□□□□ -2.22
PROM1-216ENST00000513946 DNAH11Q96DT5 4516 aa1.17□□□□□ -2.22
PROM1-216ENST00000513946 PKD1P98161 4303 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 FAT2Q9NYQ8 4349 aa1.16□□□□□ -2.22
PROM1-216ENST00000513946 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms