RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 MRPL33O75394 65 aaKnown RBP-1.02□□□□□ -2.57
SMN1-208ENST00000513228 GNG2P59768 71 aa-1.02□□□□□ -2.57
SMN1-208ENST00000513228 ERVK-7P63135 1459 aa-1.02□□□□□ -2.57
SMN1-208ENST00000513228 USP34Q70CQ2 3546 aa-1.02□□□□□ -2.57
SMN1-208ENST00000513228 ABCC1P33527 1531 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 RALGAPBQ86X10 1494 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 DEFB4AO15263 64 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 WT1-ASQ06250 92 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 BVES-AS1Q5T3Y7 98 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 CLPSL2Q6UWE3 100 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 UBL5Q9BZL1 73 aa-1.03□□□□□ -2.57
SMN1-208ENST00000513228 NRAPQ86VF7 1730 aa-1.03□□□□□ -2.58
SMN1-208ENST00000513228 KIF1AQ12756 1690 aa-1.04□□□□□ -2.58
SMN1-208ENST00000513228 RB1CC1Q8TDY2 1594 aa-1.04□□□□□ -2.58
SMN1-208ENST00000513228 CFAP74Q9C0B2 1584 aa-1.04□□□□□ -2.58
SMN1-208ENST00000513228 INO80Q9ULG1 1556 aaPredicted RBP-1.04□□□□□ -2.58
SMN1-208ENST00000513228 RPS27P42677 84 aaKnown RBP-1.04□□□□□ -2.58
SMN1-208ENST00000513228 RPS27LQ71UM5 84 aaKnown RBP-1.04□□□□□ -2.58
SMN1-208ENST00000513228 S100A13Q99584 98 aa-1.04□□□□□ -2.58
SMN1-208ENST00000513228 ASPMQ8IZT6 3477 aa-1.04□□□□□ -2.58
SMN1-208ENST00000513228 NHSQ6T4R5 1651 aa-1.05□□□□□ -2.58
SMN1-208ENST00000513228 UNC80Q8N2C7 3258 aa-1.05□□□□□ -2.58
SMN1-208ENST00000513228 RPS29P62273 56 aaKnown RBP-1.06□□□□□ -2.58
SMN1-208ENST00000513228 ENHOQ6UWT2 76 aa-1.06□□□□□ -2.58
SMN1-208ENST00000513228 LMTK2Q8IWU2 1503 aa-1.06□□□□□ -2.58
SMN1-208ENST00000513228 IGLV5-48A0A075B6I7 105 aa-1.07□□□□□ -2.58
SMN1-208ENST00000513228 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.07□□□□□ -2.58
SMN1-208ENST00000513228 CEP250Q9BV73 2442 aa-1.08□□□□□ -2.58
SMN1-208ENST00000513228 MINOS1Q5TGZ0 78 aa-1.08□□□□□ -2.58
SMN1-208ENST00000513228 CCDC18Q5T9S5 1454 aa-1.08□□□□□ -2.58
SMN1-208ENST00000513228 LRRIQ1Q96JM4 1722 aa-1.09□□□□□ -2.58
SMN1-208ENST00000513228 ETDCA0A1B0GVM5 59 aa-1.09□□□□□ -2.58
SMN1-208ENST00000513228 C18orf32Q8TCD1 76 aa-1.09□□□□□ -2.58
SMN1-208ENST00000513228 DNAH12Q6ZR08 3092 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 MMP24-AS1A0A0U1RRL7 71 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 NCBP2-AS2Q69YL0 99 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 ABCA8O94911 1581 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 SMARCA2P51531 1590 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 LY75O60449 1722 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 CENPFP49454 3210 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 ASXL1Q8IXJ9 1541 aa-1.1□□□□□ -2.59
SMN1-208ENST00000513228 TNP1P09430 55 aa-1.11□□□□□ -2.59
SMN1-208ENST00000513228 DIP2AQ14689 1571 aa-1.12□□□□□ -2.59
SMN1-208ENST00000513228 ANKARQ7Z5J8 1434 aa-1.12□□□□□ -2.59
SMN1-208ENST00000513228 H3BVH4 76 aa-1.13□□□□□ -2.59
SMN1-208ENST00000513228 C6orf48Q9UBA6 75 aa-1.13□□□□□ -2.59
SMN1-208ENST00000513228 MYO5CQ9NQX4 1742 aa-1.13□□□□□ -2.59
SMN1-208ENST00000513228 BRCA2P51587 3418 aa-1.14□□□□□ -2.59
SMN1-208ENST00000513228 C3P01024 1663 aa-1.14□□□□□ -2.59
SMN1-208ENST00000513228 RRBP1Q9P2E9 1410 aaKnown RBP-1.15□□□□□ -2.59
SMN1-208ENST00000513228 LINC01546A6NGU7 62 aa-1.15□□□□□ -2.59
SMN1-208ENST00000513228 SFTA3P0C7M3 94 aa-1.15□□□□□ -2.59
SMN1-208ENST00000513228 FCER1GP30273 86 aa-1.15□□□□□ -2.59
SMN1-208ENST00000513228 ABCC6O95255 1503 aa-1.15□□□□□ -2.59
SMN1-208ENST00000513228 CDH23Q9H251 3354 aa-1.16□□□□□ -2.59
SMN1-208ENST00000513228 DEFB114Q30KQ6 69 aa-1.16□□□□□ -2.6
SMN1-208ENST00000513228 H3BUA1 57 aa-1.17□□□□□ -2.6
SMN1-208ENST00000513228 DEFB136Q30KP8 78 aa-1.17□□□□□ -2.6
SMN1-208ENST00000513228 MAST1Q9Y2H9 1570 aa-1.17□□□□□ -2.6
SMN1-208ENST00000513228 XIRP2A4UGR9 3374 aa-1.17□□□□□ -2.6
SMN1-208ENST00000513228 VPS13AQ96RL7 3174 aa-1.18□□□□□ -2.6
SMN1-208ENST00000513228 KRTAP19-2Q3LHN2 52 aa-1.18□□□□□ -2.6
SMN1-208ENST00000513228 NOP10Q9NPE3 64 aaKnown RBP-1.18□□□□□ -2.6
SMN1-208ENST00000513228 A0A1B0GUL6 1792 aa-1.19□□□□□ -2.6
SMN1-208ENST00000513228 A8MTW9 85 aa-1.19□□□□□ -2.6
SMN1-208ENST00000513228 DNMBPQ6XZF7 1577 aa-1.19□□□□□ -2.6
SMN1-208ENST00000513228 IQGAP3Q86VI3 1631 aa-1.19□□□□□ -2.6
SMN1-208ENST00000513228 MROH1Q8NDA8 1641 aa-1.19□□□□□ -2.6
SMN1-208ENST00000513228 CLASP1Q7Z460 1538 aa-1.2□□□□□ -2.6
SMN1-208ENST00000513228 ATXN8Q156A1 80 aa-1.2□□□□□ -2.6
SMN1-208ENST00000513228 HILPDAQ9Y5L2 63 aa-1.21□□□□□ -2.6
SMN1-208ENST00000513228 ABCA9Q8IUA7 1624 aa-1.22□□□□□ -2.6
SMN1-208ENST00000513228 UTRNP46939 3433 aa-1.22□□□□□ -2.6
SMN1-208ENST00000513228 KIF21BO75037 1637 aa-1.22□□□□□ -2.61
SMN1-208ENST00000513228 LEAP2Q969E1 77 aa-1.23□□□□□ -2.61
SMN1-208ENST00000513228 M0QZ58 72 aa-1.24□□□□□ -2.61
SMN1-208ENST00000513228 CROCC2H7BZ55 1655 aa-1.24□□□□□ -2.61
SMN1-208ENST00000513228 SPART-AS1P0CW21 52 aa-1.25□□□□□ -2.61
SMN1-208ENST00000513228 UGGT2Q9NYU1 1516 aa-1.25□□□□□ -2.61
SMN1-208ENST00000513228 MADDQ8WXG6 1647 aa-1.26□□□□□ -2.61
SMN1-208ENST00000513228 M0QY20 66 aa-1.26□□□□□ -2.61
SMN1-208ENST00000513228 TIAM1Q13009 1591 aa-1.26□□□□□ -2.61
SMN1-208ENST00000513228 EEA1Q15075 1411 aa-1.28□□□□□ -2.61
SMN1-208ENST00000513228 GNG13Q9P2W3 67 aa-1.28□□□□□ -2.61
SMN1-208ENST00000513228 DUOX2Q9NRD8 1548 aa-1.29□□□□□ -2.62
SMN1-208ENST00000513228 NRXN3Q9Y4C0 1643 aa-1.29□□□□□ -2.62
SMN1-208ENST00000513228 GLI2P10070 1586 aa-1.3□□□□□ -2.62
SMN1-208ENST00000513228 TTTY10Q9BZA0 68 aa-1.3□□□□□ -2.62
SMN1-208ENST00000513228 LINC01549A6NIU2 74 aa-1.31□□□□□ -2.62
SMN1-208ENST00000513228 GOLGB1Q14789 3259 aaKnown RBP-1.32□□□□□ -2.62
SMN1-208ENST00000513228 K7EMI3 77 aa-1.33□□□□□ -2.62
SMN1-208ENST00000513228 FAM208AQ9UK61 1670 aaKnown RBP-1.33□□□□□ -2.62
SMN1-208ENST00000513228 KAAG1Q9UBP8 84 aa-1.34□□□□□ -2.62
SMN1-208ENST00000513228 M0R1W7 72 aa-1.35□□□□□ -2.63
SMN1-208ENST00000513228 SMCO4Q9NRQ5 59 aa-1.35□□□□□ -2.63
SMN1-208ENST00000513228 PREX2Q70Z35 1606 aa-1.36□□□□□ -2.63
SMN1-208ENST00000513228 ABCA6Q8N139 1617 aa-1.36□□□□□ -2.63
SMN1-208ENST00000513228 ABRACLQ9P1F3 81 aa-1.36□□□□□ -2.63
SMN1-208ENST00000513228 ALS2Q96Q42 1657 aa-1.36□□□□□ -2.63
SMN1-208ENST00000513228 PDCD5O14737 125 aa-1.38□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms