RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 SSBP3-AS1Q7Z2R9 100 aa3.11□□□□□ -1.91
PDLIM3-208ENST00000512380 C9orf153Q5TBE3 101 aa3.1□□□□□ -1.91
PDLIM3-208ENST00000512380 SPAG11AQ6PDA7 123 aa3.1□□□□□ -1.91
PDLIM3-208ENST00000512380 SNHG12Q9BXW3 62 aa3.1□□□□□ -1.91
PDLIM3-208ENST00000512380 HERC2O95714 4834 aa3.09□□□□□ -1.91
PDLIM3-208ENST00000512380 FLG2Q5D862 2391 aaPredicted RBP3.09□□□□□ -1.91
PDLIM3-208ENST00000512380 PPDPFLQ8WWR9 84 aa3.09□□□□□ -1.91
PDLIM3-208ENST00000512380 JMJD7-PLA2G4BH0Y9G9 81 aa3.08□□□□□ -1.92
PDLIM3-208ENST00000512380 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
PDLIM3-208ENST00000512380 Q6ZQY7 126 aa3.08□□□□□ -1.92
PDLIM3-208ENST00000512380 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
PDLIM3-208ENST00000512380 F8WEM9 126 aa3.07□□□□□ -1.92
PDLIM3-208ENST00000512380 SPRR1BP22528 89 aa3.07□□□□□ -1.92
PDLIM3-208ENST00000512380 IGLV5-48A0A075B6I7 105 aa3.06□□□□□ -1.92
PDLIM3-208ENST00000512380 SPINK1P00995 79 aa3.06□□□□□ -1.92
PDLIM3-208ENST00000512380 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
PDLIM3-208ENST00000512380 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
PDLIM3-208ENST00000512380 VPS13BQ7Z7G8 4022 aa3.06□□□□□ -1.92
PDLIM3-208ENST00000512380 SNURFQ9Y675 71 aa3.06□□□□□ -1.92
PDLIM3-208ENST00000512380 H3BUT2 72 aa3.04□□□□□ -1.92
PDLIM3-208ENST00000512380 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
PDLIM3-208ENST00000512380 INE1O15225 51 aa3.03□□□□□ -1.92
PDLIM3-208ENST00000512380 ATXN8Q156A1 80 aa3.03□□□□□ -1.92
PDLIM3-208ENST00000512380 Q6JHZ5 121 aa3.03□□□□□ -1.92
PDLIM3-208ENST00000512380 COL5A1-AS1Q5SY13 56 aa3.02□□□□□ -1.93
PDLIM3-208ENST00000512380 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
PDLIM3-208ENST00000512380 DMBT1Q9UGM3 2413 aaPredicted RBP3.02□□□□□ -1.93
PDLIM3-208ENST00000512380 RBM3P98179 157 aaKnown RBP3.01□□□□□ -1.93
PDLIM3-208ENST00000512380 DSCR8Q96T75 97 aa3.01□□□□□ -1.93
PDLIM3-208ENST00000512380 A0A1W2PPM0 123 aa3□□□□□ -1.93
PDLIM3-208ENST00000512380 RPS29P62273 56 aaKnown RBP3□□□□□ -1.93
PDLIM3-208ENST00000512380 LRP1Q07954 4544 aaKnown RBP3□□□□□ -1.93
PDLIM3-208ENST00000512380 LOC110117498A0A087WWA1 95 aa2.99□□□□□ -1.93
PDLIM3-208ENST00000512380 PDE6GP18545 87 aa2.99□□□□□ -1.93
PDLIM3-208ENST00000512380 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
PDLIM3-208ENST00000512380 SPTSSBQ8NFR3 76 aa2.99□□□□□ -1.93
PDLIM3-208ENST00000512380 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
PDLIM3-208ENST00000512380 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
PDLIM3-208ENST00000512380 TRBV7-7A0A0K0K1E9 115 aa2.98□□□□□ -1.93
PDLIM3-208ENST00000512380 SPCS1Q9Y6A9 102 aa2.98□□□□□ -1.93
PDLIM3-208ENST00000512380 CCKP06307 115 aa2.97□□□□□ -1.93
PDLIM3-208ENST00000512380 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
PDLIM3-208ENST00000512380 PCLOQ9Y6V0 5065 aa2.95□□□□□ -1.94
PDLIM3-208ENST00000512380 TRBV7-4A0A0J9YYF1 115 aa2.95□□□□□ -1.94
PDLIM3-208ENST00000512380 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
PDLIM3-208ENST00000512380 ZCCHC13Q8WW36 166 aaKnown RBP2.95□□□□□ -1.94
PDLIM3-208ENST00000512380 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
PDLIM3-208ENST00000512380 IGKV3D-7A0A0C4DH55 119 aa2.93□□□□□ -1.94
PDLIM3-208ENST00000512380 C9orf92A6NGG3 77 aa2.93□□□□□ -1.94
PDLIM3-208ENST00000512380 K7EP34 96 aa2.93□□□□□ -1.94
PDLIM3-208ENST00000512380 OBSCN-AS1Q96MR7 158 aa2.93□□□□□ -1.94
PDLIM3-208ENST00000512380 TNXBP22105 4242 aa2.92□□□□□ -1.94
PDLIM3-208ENST00000512380 NREPQ16612 68 aa2.91□□□□□ -1.94
PDLIM3-208ENST00000512380 LOC101927531A0A1B0GV80 90 aa2.9□□□□□ -1.95
PDLIM3-208ENST00000512380 Q96NJ1 140 aa2.9□□□□□ -1.95
PDLIM3-208ENST00000512380 NDUFB1O75438 58 aa2.89□□□□□ -1.95
PDLIM3-208ENST00000512380 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
PDLIM3-208ENST00000512380 LINC00472Q9H8W2 130 aa2.89□□□□□ -1.95
PDLIM3-208ENST00000512380 CYSTM1Q9H1C7 97 aa2.88□□□□□ -1.95
PDLIM3-208ENST00000512380 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
PDLIM3-208ENST00000512380 HERC1Q15751 4861 aa2.86□□□□□ -1.95
PDLIM3-208ENST00000512380 ETDBQ3ZM63 59 aa2.86□□□□□ -1.95
PDLIM3-208ENST00000512380 ATP5EP56381 51 aaPredicted RBP2.85□□□□□ -1.95
PDLIM3-208ENST00000512380 PP632Q6XCG6 107 aa2.85□□□□□ -1.95
PDLIM3-208ENST00000512380 UBL5Q9BZL1 73 aa2.85□□□□□ -1.95
PDLIM3-208ENST00000512380 RPL37P61927 97 aaKnown RBP2.83□□□□□ -1.96
PDLIM3-208ENST00000512380 LINC00846Q9NV44 126 aa2.83□□□□□ -1.96
PDLIM3-208ENST00000512380 LPAP08519 4548 aa2.82□□□□□ -1.96
PDLIM3-208ENST00000512380 ACYP1P07311 99 aa2.82□□□□□ -1.96
PDLIM3-208ENST00000512380 C20orf197Q8N268 126 aa2.81□□□□□ -1.96
PDLIM3-208ENST00000512380 K7EQZ3 153 aa2.79□□□□□ -1.96
PDLIM3-208ENST00000512380 LINC00208Q96KT6 92 aa2.79□□□□□ -1.96
PDLIM3-208ENST00000512380 MRPL34Q9BQ48 92 aaKnown RBP2.78□□□□□ -1.96
PDLIM3-208ENST00000512380 KRTAP4-1Q9BYQ7 146 aa2.78□□□□□ -1.96
PDLIM3-208ENST00000512380 MT-ATP8P03928 68 aa2.77□□□□□ -1.97
PDLIM3-208ENST00000512380 WFDC13Q8IUB5 93 aa2.77□□□□□ -1.97
PDLIM3-208ENST00000512380 CYP4F30PQ9H0H9 118 aa2.77□□□□□ -1.97
PDLIM3-208ENST00000512380 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
PDLIM3-208ENST00000512380 MMP24-AS1A0A0U1RRL7 71 aa2.76□□□□□ -1.97
PDLIM3-208ENST00000512380 LRP2P98164 4655 aa2.75□□□□□ -1.97
PDLIM3-208ENST00000512380 COX6B2Q6YFQ2 88 aa2.74□□□□□ -1.97
PDLIM3-208ENST00000512380 LINC00643Q86TS7 51 aa2.74□□□□□ -1.97
PDLIM3-208ENST00000512380 SPINK7P58062 85 aa2.73□□□□□ -1.97
PDLIM3-208ENST00000512380 ATP5EP2Q5VTU8 51 aa2.72□□□□□ -1.97
PDLIM3-208ENST00000512380 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
PDLIM3-208ENST00000512380 TP53AIP1Q9HCN2 124 aa2.71□□□□□ -1.98
PDLIM3-208ENST00000512380 M0R2T5 61 aa2.69□□□□□ -1.98
PDLIM3-208ENST00000512380 MUC17Q685J3 4493 aa2.69□□□□□ -1.98
PDLIM3-208ENST00000512380 A0A087WVE0 104 aa2.67□□□□□ -1.98
PDLIM3-208ENST00000512380 KLKP1Q107X0 134 aa2.67□□□□□ -1.98
PDLIM3-208ENST00000512380 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
PDLIM3-208ENST00000512380 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
PDLIM3-208ENST00000512380 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
PDLIM3-208ENST00000512380 MT1HP80294 61 aa2.64□□□□□ -1.99
PDLIM3-208ENST00000512380 TRAV22A0A0B4J277 110 aa2.63□□□□□ -1.99
PDLIM3-208ENST00000512380 H0Y9P7 68 aa2.63□□□□□ -1.99
PDLIM3-208ENST00000512380 ATOX1O00244 68 aa2.63□□□□□ -1.99
PDLIM3-208ENST00000512380 H1FX-AS1Q4G0G2 97 aa2.63□□□□□ -1.99
PDLIM3-208ENST00000512380 MUC2Q02817 5179 aa2.63□□□□□ -1.99
PDLIM3-208ENST00000512380 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms