RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 DEFB1P60022 68 aa-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 EFCAB6Q5THR3 1501 aa-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 RIF1Q5UIP0 2472 aaKnown RBP-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 CELSR3Q9NYQ7 3312 aa-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 MGAM2Q2M2H8 2515 aa-0.4□□□□□ -2.47
PDGFC-207ENST00000511985 DNAH1Q9P2D7 4330 aa-0.41□□□□□ -2.47
PDGFC-207ENST00000511985 ACACBO00763 2458 aa-0.41□□□□□ -2.47
PDGFC-207ENST00000511985 KIF21BO75037 1637 aa-0.41□□□□□ -2.47
PDGFC-207ENST00000511985 WFDC10BQ8IUB3 73 aa-0.41□□□□□ -2.48
PDGFC-207ENST00000511985 USP9YO00507 2555 aaPredicted RBP-0.41□□□□□ -2.48
PDGFC-207ENST00000511985 ITPR3Q14573 2671 aa-0.41□□□□□ -2.48
PDGFC-207ENST00000511985 TACC2O95359 2948 aa-0.42□□□□□ -2.48
PDGFC-207ENST00000511985 MYO18BQ8IUG5 2567 aa-0.42□□□□□ -2.48
PDGFC-207ENST00000511985 ACACAQ13085 2346 aa-0.42□□□□□ -2.48
PDGFC-207ENST00000511985 ADCY10Q96PN6 1610 aa-0.42□□□□□ -2.48
PDGFC-207ENST00000511985 RANBP2P49792 3224 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-207ENST00000511985 UTP20O75691 2785 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-207ENST00000511985 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.43□□□□□ -2.48
PDGFC-207ENST00000511985 ZZEF1O43149 2961 aa-0.43□□□□□ -2.48
PDGFC-207ENST00000511985 FAM186AA6NE01 2351 aa-0.43□□□□□ -2.48
PDGFC-207ENST00000511985 SYCP2Q9BX26 1530 aa-0.43□□□□□ -2.48
PDGFC-207ENST00000511985 WDR87Q6ZQQ6 2873 aa-0.44□□□□□ -2.48
PDGFC-207ENST00000511985 LRRK2Q5S007 2527 aa-0.44□□□□□ -2.48
PDGFC-207ENST00000511985 TRIOO75962 3097 aa-0.44□□□□□ -2.48
PDGFC-207ENST00000511985 CMC2Q9NRP2 79 aa-0.44□□□□□ -2.48
PDGFC-207ENST00000511985 HTTP42858 3142 aa-0.44□□□□□ -2.48
PDGFC-207ENST00000511985 LAMA1P25391 3075 aa-0.45□□□□□ -2.48
PDGFC-207ENST00000511985 AKAP9Q99996 3911 aa-0.45□□□□□ -2.48
PDGFC-207ENST00000511985 NIPBLQ6KC79 2804 aaeCLIP-0.46□□□□□ -2.48
PDGFC-207ENST00000511985 DEFB131AP59861 70 aa-0.46□□□□□ -2.48
PDGFC-207ENST00000511985 PREX2Q70Z35 1606 aa-0.46□□□□□ -2.48
PDGFC-207ENST00000511985 USP9XQ93008 2570 aaPredicted RBP-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 FANCD2Q9BXW9 1451 aa-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 DYNC1H1Q14204 4646 aaKnown RBP-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 ABCC8Q09428 1581 aa-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 TFF3Q07654 80 aa-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 ABCA5Q8WWZ7 1642 aa-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 LMO7Q8WWI1 1683 aa-0.47□□□□□ -2.48
PDGFC-207ENST00000511985 FAM208AQ9UK61 1670 aaKnown RBP-0.48□□□□□ -2.49
PDGFC-207ENST00000511985 LINC01546A6NGU7 62 aa-0.48□□□□□ -2.49
PDGFC-207ENST00000511985 SMIM2Q9BVW6 85 aa-0.48□□□□□ -2.49
PDGFC-207ENST00000511985 LAMA3Q16787 3333 aa-0.48□□□□□ -2.49
PDGFC-207ENST00000511985 NBEAQ8NFP9 2946 aa-0.49□□□□□ -2.49
PDGFC-207ENST00000511985 MT1EP04732 61 aa-0.49□□□□□ -2.49
PDGFC-207ENST00000511985 MROH2AA6NES4 1674 aa-0.49□□□□□ -2.49
PDGFC-207ENST00000511985 MYO15AQ9UKN7 3530 aa-0.5□□□□□ -2.49
PDGFC-207ENST00000511985 CCDC168Q8NDH2 2452 aa-0.5□□□□□ -2.49
PDGFC-207ENST00000511985 SPART-AS1P0CW21 52 aa-0.5□□□□□ -2.49
PDGFC-207ENST00000511985 MT1XP80297 61 aa-0.5□□□□□ -2.49
PDGFC-207ENST00000511985 ITPR2Q14571 2701 aa-0.5□□□□□ -2.49
PDGFC-207ENST00000511985 NRXN3Q9Y4C0 1643 aa-0.5□□□□□ -2.49
PDGFC-207ENST00000511985 KRTAP19-6Q3LI70 58 aa-0.51□□□□□ -2.49
PDGFC-207ENST00000511985 DNAH10Q8IVF4 4471 aa-0.52□□□□□ -2.49
PDGFC-207ENST00000511985 A0A1B0GUL6 1792 aa-0.52□□□□□ -2.49
PDGFC-207ENST00000511985 TLN2Q9Y4G6 2542 aa-0.52□□□□□ -2.49
PDGFC-207ENST00000511985 ITPR1Q14643 2758 aa-0.52□□□□□ -2.49
PDGFC-207ENST00000511985 TRPM2O94759 1503 aa-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 DNAH17Q9UFH2 4485 aa-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 KALRNO60229 2985 aa-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 SNRPGP15A8MWD9 76 aa-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 POLR2KP53803 58 aaKnown RBP-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 MT1LQ93083 61 aa-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 RELNP78509 3460 aa-0.53□□□□□ -2.49
PDGFC-207ENST00000511985 TEX15Q9BXT5 2789 aa-0.54□□□□□ -2.5
PDGFC-207ENST00000511985 NFAT5O94916 1531 aa-0.55□□□□□ -2.5
PDGFC-207ENST00000511985 CMYA5Q8N3K9 4069 aa-0.55□□□□□ -2.5
PDGFC-207ENST00000511985 IQGAP1P46940 1657 aa-0.56□□□□□ -2.5
PDGFC-207ENST00000511985 DNAH7Q8WXX0 4024 aa-0.56□□□□□ -2.5
PDGFC-207ENST00000511985 SRCAPQ6ZRS2 3230 aa-0.57□□□□□ -2.5
PDGFC-207ENST00000511985 NDUFA1O15239 70 aa-0.57□□□□□ -2.5
PDGFC-207ENST00000511985 DNAH5Q8TE73 4624 aa-0.57□□□□□ -2.5
PDGFC-207ENST00000511985 SPENQ96T58 3664 aaKnown RBP-0.57□□□□□ -2.5
PDGFC-207ENST00000511985 DMXL2Q8TDJ6 3036 aa-0.57□□□□□ -2.5
PDGFC-207ENST00000511985 MT1HL1P0DM35 61 aa-0.58□□□□□ -2.5
PDGFC-207ENST00000511985 A0A0C4DFX4 3053 aa-0.58□□□□□ -2.5
PDGFC-207ENST00000511985 CHD7Q9P2D1 2997 aa-0.59□□□□□ -2.5
PDGFC-207ENST00000511985 SPTBN5Q9NRC6 3674 aaKnown RBP-0.59□□□□□ -2.5
PDGFC-207ENST00000511985 CSMD2Q7Z408 3487 aa-0.6□□□□□ -2.51
PDGFC-207ENST00000511985 EYSQ5T1H1 3165 aa-0.61□□□□□ -2.51
PDGFC-207ENST00000511985 CEP295Q9C0D2 2601 aa-0.61□□□□□ -2.51
PDGFC-207ENST00000511985 CFAP46Q8IYW2 2715 aa-0.61□□□□□ -2.51
PDGFC-207ENST00000511985 ZFHX4Q86UP3 3567 aa-0.61□□□□□ -2.51
PDGFC-207ENST00000511985 FRYQ5TBA9 3013 aa-0.62□□□□□ -2.51
PDGFC-207ENST00000511985 LEAP2Q969E1 77 aa-0.62□□□□□ -2.51
PDGFC-207ENST00000511985 SMG1Q96Q15 3661 aaKnown RBP-0.62□□□□□ -2.51
PDGFC-207ENST00000511985 C5orf42Q9H799 3197 aa-0.62□□□□□ -2.51
PDGFC-207ENST00000511985 CLTCL1P53675 1640 aa-0.64□□□□□ -2.51
PDGFC-207ENST00000511985 DDX60Q8IY21 1712 aaKnown RBP-0.64□□□□□ -2.51
PDGFC-207ENST00000511985 MYO9AB2RTY4 2548 aa-0.64□□□□□ -2.51
PDGFC-207ENST00000511985 SPTAN1Q13813 2472 aaKnown RBP-0.65□□□□□ -2.51
PDGFC-207ENST00000511985 CSMD1Q96PZ7 3565 aa-0.66□□□□□ -2.51
PDGFC-207ENST00000511985 MT1GP13640 62 aa-0.66□□□□□ -2.52
PDGFC-207ENST00000511985 TRRAPQ9Y4A5 3859 aa-0.66□□□□□ -2.52
PDGFC-207ENST00000511985 BOD1L1Q8NFC6 3051 aa-0.66□□□□□ -2.52
PDGFC-207ENST00000511985 MT1BP07438 61 aa-0.67□□□□□ -2.52
PDGFC-207ENST00000511985 DEFB136Q30KP8 78 aa-0.67□□□□□ -2.52
PDGFC-207ENST00000511985 MT1MQ8N339 61 aa-0.67□□□□□ -2.52
PDGFC-207ENST00000511985 TLN1Q9Y490 2541 aaKnown RBP-0.67□□□□□ -2.52
PDGFC-207ENST00000511985 MT2AP02795 61 aa-0.68□□□□□ -2.52
PDGFC-207ENST00000511985 TOMM5Q8N4H5 51 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms