RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
HTT-208ENST00000510626 ANK2Q01484 3957 aa3.71□□□□□ -1.82
HTT-208ENST00000510626 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
HTT-208ENST00000510626 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
HTT-208ENST00000510626 CSMD2Q7Z408 3487 aa3.66□□□□□ -1.82
HTT-208ENST00000510626 CSMD3Q7Z407 3707 aa3.64□□□□□ -1.83
HTT-208ENST00000510626 DNAH6Q9C0G6 4158 aa3.6□□□□□ -1.83
HTT-208ENST00000510626 DNAH2Q9P225 4427 aa3.6□□□□□ -1.83
HTT-208ENST00000510626 LYSTQ99698 3801 aa3.56□□□□□ -1.84
HTT-208ENST00000510626 DNAH10Q8IVF4 4471 aa3.55□□□□□ -1.84
HTT-208ENST00000510626 DNAH11Q96DT5 4516 aa3.55□□□□□ -1.84
HTT-208ENST00000510626 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
HTT-208ENST00000510626 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
HTT-208ENST00000510626 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
HTT-208ENST00000510626 KMT2AQ03164 3969 aa3.51□□□□□ -1.85
HTT-208ENST00000510626 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
HTT-208ENST00000510626 KRTAP10-4P60372 401 aaPredicted RBP3.49□□□□□ -1.85
HTT-208ENST00000510626 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
HTT-208ENST00000510626 PRKDCP78527 4128 aaKnown RBP3.46□□□□□ -1.86
HTT-208ENST00000510626 VPS13DQ5THJ4 4388 aa3.4□□□□□ -1.86
HTT-208ENST00000510626 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.86
HTT-208ENST00000510626 MT3P25713 68 aa3.34□□□□□ -1.87
HTT-208ENST00000510626 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
HTT-208ENST00000510626 DNAH17Q9UFH2 4485 aa3.34□□□□□ -1.88
HTT-208ENST00000510626 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
HTT-208ENST00000510626 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
HTT-208ENST00000510626 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
HTT-208ENST00000510626 PKHD1P08F94 4074 aa3.27□□□□□ -1.89
HTT-208ENST00000510626 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
HTT-208ENST00000510626 LORP23490 312 aaPredicted RBP3.25□□□□□ -1.89
HTT-208ENST00000510626 DYNC1H1Q14204 4646 aaKnown RBP3.25□□□□□ -1.89
HTT-208ENST00000510626 PLECQ15149 4684 aaKnown RBP3.24□□□□□ -1.89
HTT-208ENST00000510626 DYNC2H1Q8NCM8 4307 aaKnown RBP3.24□□□□□ -1.89
HTT-208ENST00000510626 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
HTT-208ENST00000510626 DNAH8Q96JB1 4490 aa3.24□□□□□ -1.89
HTT-208ENST00000510626 FAT2Q9NYQ8 4349 aa3.22□□□□□ -1.89
HTT-208ENST00000510626 SACSQ9NZJ4 4579 aa3.19□□□□□ -1.9
HTT-208ENST00000510626 DNAH9Q9NYC9 4486 aa3.17□□□□□ -1.9
HTT-208ENST00000510626 PKHD1L1Q86WI1 4243 aa3.15□□□□□ -1.9
HTT-208ENST00000510626 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
HTT-208ENST00000510626 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
HTT-208ENST00000510626 PKD1P98161 4303 aa3.11□□□□□ -1.91
HTT-208ENST00000510626 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
HTT-208ENST00000510626 RYR1P21817 5038 aa3.09□□□□□ -1.91
HTT-208ENST00000510626 MT1HP80294 61 aa3.07□□□□□ -1.92
HTT-208ENST00000510626 MT2AP02795 61 aa3.05□□□□□ -1.92
HTT-208ENST00000510626 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
HTT-208ENST00000510626 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
HTT-208ENST00000510626 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
HTT-208ENST00000510626 FAT3Q8TDW7 4589 aa3.04□□□□□ -1.92
HTT-208ENST00000510626 HSPG2P98160 4391 aa3.04□□□□□ -1.92
HTT-208ENST00000510626 TNXBP22105 4242 aa2.98□□□□□ -1.93
HTT-208ENST00000510626 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
HTT-208ENST00000510626 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
HTT-208ENST00000510626 MYCBP2O75592 4640 aa2.96□□□□□ -1.94
HTT-208ENST00000510626 MT1FP04733 61 aa2.95□□□□□ -1.94
HTT-208ENST00000510626 LRP1BQ9NZR2 4599 aa2.93□□□□□ -1.94
HTT-208ENST00000510626 FAT1Q14517 4588 aa2.92□□□□□ -1.94
HTT-208ENST00000510626 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
HTT-208ENST00000510626 MT1XP80297 61 aa2.9□□□□□ -1.95
HTT-208ENST00000510626 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
HTT-208ENST00000510626 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
HTT-208ENST00000510626 RYR3Q15413 4870 aa2.87□□□□□ -1.95
HTT-208ENST00000510626 MT1GP13640 62 aa2.87□□□□□ -1.95
HTT-208ENST00000510626 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
HTT-208ENST00000510626 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
HTT-208ENST00000510626 MT1LQ93083 61 aa2.83□□□□□ -1.96
HTT-208ENST00000510626 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
HTT-208ENST00000510626 MT1EP04732 61 aa2.78□□□□□ -1.96
HTT-208ENST00000510626 PCLOQ9Y6V0 5065 aa2.77□□□□□ -1.97
HTT-208ENST00000510626 RYR2Q92736 4967 aa2.77□□□□□ -1.97
HTT-208ENST00000510626 DNHD1Q96M86 4753 aa2.76□□□□□ -1.97
HTT-208ENST00000510626 MT1BP07438 61 aa2.74□□□□□ -1.97
HTT-208ENST00000510626 HYDINQ4G0P3 5121 aa2.72□□□□□ -1.97
HTT-208ENST00000510626 LCE2BO14633 110 aa2.71□□□□□ -1.98
HTT-208ENST00000510626 KRTAP9-8Q9BYQ0 159 aa2.69□□□□□ -1.98
HTT-208ENST00000510626 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
HTT-208ENST00000510626 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
HTT-208ENST00000510626 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
HTT-208ENST00000510626 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
HTT-208ENST00000510626 MT1AP04731 61 aa2.68□□□□□ -1.98
HTT-208ENST00000510626 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
HTT-208ENST00000510626 SPRR2EP22531 72 aa2.67□□□□□ -1.98
HTT-208ENST00000510626 SPRR2BP35325 72 aa2.67□□□□□ -1.98
HTT-208ENST00000510626 SPRR2AP35326 72 aa2.67□□□□□ -1.98
HTT-208ENST00000510626 BIRC6Q9NR09 4857 aa2.66□□□□□ -1.98
HTT-208ENST00000510626 SPRR2DP22532 72 aa2.62□□□□□ -1.99
HTT-208ENST00000510626 LRP2P98164 4655 aa2.62□□□□□ -1.99
HTT-208ENST00000510626 HERC2O95714 4834 aa2.6□□□□□ -1.99
HTT-208ENST00000510626 MT1MQ8N339 61 aa2.57□□□□□ -2
HTT-208ENST00000510626 PRM1P04553 51 aa2.57□□□□□ -2
HTT-208ENST00000510626 KMT2CQ8NEZ4 4911 aaKnown RBP2.56□□□□□ -2
HTT-208ENST00000510626 MUC17Q685J3 4493 aa2.56□□□□□ -2
HTT-208ENST00000510626 LCE2CQ5TA81 110 aa2.55□□□□□ -2
HTT-208ENST00000510626 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
HTT-208ENST00000510626 HERC1Q15751 4861 aa2.51□□□□□ -2.01
HTT-208ENST00000510626 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
HTT-208ENST00000510626 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
HTT-208ENST00000510626 EPPK1P58107 5090 aaKnown RBP2.5□□□□□ -2.01
HTT-208ENST00000510626 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms