RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 BSNQ9UPA5 3926 aa3.75□□□□□ -1.81
ARHGEF28-210ENST00000510312 VPS13CQ709C8 3753 aa3.75□□□□□ -1.81
ARHGEF28-210ENST00000510312 SVEP1Q4LDE5 3571 aa3.74□□□□□ -1.81
ARHGEF28-210ENST00000510312 MUC3AQ02505 3323 aa3.73□□□□□ -1.81
ARHGEF28-210ENST00000510312 FBN1P35555 2871 aaKnown RBP3.72□□□□□ -1.81
ARHGEF28-210ENST00000510312 DNAH7Q8WXX0 4024 aa3.72□□□□□ -1.81
ARHGEF28-210ENST00000510312 DNAH3Q8TD57 4116 aa3.72□□□□□ -1.81
ARHGEF28-210ENST00000510312 OTOGQ6ZRI0 2925 aa3.68□□□□□ -1.82
ARHGEF28-210ENST00000510312 DNAH9Q9NYC9 4486 aa3.66□□□□□ -1.82
ARHGEF28-210ENST00000510312 MT1HP80294 61 aa3.63□□□□□ -1.83
ARHGEF28-210ENST00000510312 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
ARHGEF28-210ENST00000510312 DNAH6Q9C0G6 4158 aa3.61□□□□□ -1.83
ARHGEF28-210ENST00000510312 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
ARHGEF28-210ENST00000510312 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
ARHGEF28-210ENST00000510312 CUBNO60494 3623 aa3.57□□□□□ -1.84
ARHGEF28-210ENST00000510312 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
ARHGEF28-210ENST00000510312 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
ARHGEF28-210ENST00000510312 HECTD4Q9Y4D8 3996 aa3.53□□□□□ -1.84
ARHGEF28-210ENST00000510312 CSMD3Q7Z407 3707 aa3.53□□□□□ -1.84
ARHGEF28-210ENST00000510312 MT2AP02795 61 aa3.49□□□□□ -1.85
ARHGEF28-210ENST00000510312 ZNF469Q96JG9 3925 aaPredicted RBP3.48□□□□□ -1.85
ARHGEF28-210ENST00000510312 SPRR2EP22531 72 aa3.48□□□□□ -1.85
ARHGEF28-210ENST00000510312 SPRR2BP35325 72 aa3.48□□□□□ -1.85
ARHGEF28-210ENST00000510312 SPRR2AP35326 72 aa3.48□□□□□ -1.85
ARHGEF28-210ENST00000510312 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.85
ARHGEF28-210ENST00000510312 DNAH10Q8IVF4 4471 aa3.46□□□□□ -1.85
ARHGEF28-210ENST00000510312 PRKDCP78527 4128 aaKnown RBP3.46□□□□□ -1.86
ARHGEF28-210ENST00000510312 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
ARHGEF28-210ENST00000510312 FAT2Q9NYQ8 4349 aa3.45□□□□□ -1.86
ARHGEF28-210ENST00000510312 LYSTQ99698 3801 aa3.44□□□□□ -1.86
ARHGEF28-210ENST00000510312 MT1FP04733 61 aa3.44□□□□□ -1.86
ARHGEF28-210ENST00000510312 DNAH11Q96DT5 4516 aa3.42□□□□□ -1.86
ARHGEF28-210ENST00000510312 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
ARHGEF28-210ENST00000510312 ANK2Q01484 3957 aa3.41□□□□□ -1.86
ARHGEF28-210ENST00000510312 DNAH8Q96JB1 4490 aa3.4□□□□□ -1.87
ARHGEF28-210ENST00000510312 DNAH17Q9UFH2 4485 aa3.39□□□□□ -1.87
ARHGEF28-210ENST00000510312 KMT2AQ03164 3969 aa3.39□□□□□ -1.87
ARHGEF28-210ENST00000510312 VPS13BQ7Z7G8 4022 aa3.38□□□□□ -1.87
ARHGEF28-210ENST00000510312 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
ARHGEF28-210ENST00000510312 DNAH5Q8TE73 4624 aa3.36□□□□□ -1.87
ARHGEF28-210ENST00000510312 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
ARHGEF28-210ENST00000510312 SPRR2DP22532 72 aa3.35□□□□□ -1.87
ARHGEF28-210ENST00000510312 PLECQ15149 4684 aaKnown RBP3.35□□□□□ -1.87
ARHGEF28-210ENST00000510312 DYNC2H1Q8NCM8 4307 aaKnown RBP3.35□□□□□ -1.87
ARHGEF28-210ENST00000510312 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
ARHGEF28-210ENST00000510312 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
ARHGEF28-210ENST00000510312 LRP1BQ9NZR2 4599 aa3.3□□□□□ -1.88
ARHGEF28-210ENST00000510312 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
ARHGEF28-210ENST00000510312 LCE2BO14633 110 aa3.26□□□□□ -1.89
ARHGEF28-210ENST00000510312 SACSQ9NZJ4 4579 aa3.24□□□□□ -1.89
ARHGEF28-210ENST00000510312 MT1GP13640 62 aa3.22□□□□□ -1.89
ARHGEF28-210ENST00000510312 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
ARHGEF28-210ENST00000510312 DYNC1H1Q14204 4646 aaKnown RBP3.2□□□□□ -1.9
ARHGEF28-210ENST00000510312 FAT1Q14517 4588 aa3.19□□□□□ -1.9
ARHGEF28-210ENST00000510312 PKHD1P08F94 4074 aa3.18□□□□□ -1.9
ARHGEF28-210ENST00000510312 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
ARHGEF28-210ENST00000510312 FAT3Q8TDW7 4589 aa3.15□□□□□ -1.91
ARHGEF28-210ENST00000510312 KRTAP17-1Q9BYP8 105 aa3.14□□□□□ -1.91
ARHGEF28-210ENST00000510312 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
ARHGEF28-210ENST00000510312 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
ARHGEF28-210ENST00000510312 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
ARHGEF28-210ENST00000510312 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
ARHGEF28-210ENST00000510312 MT1XP80297 61 aa3.08□□□□□ -1.92
ARHGEF28-210ENST00000510312 LCE2CQ5TA81 110 aa3.08□□□□□ -1.92
ARHGEF28-210ENST00000510312 MT3P25713 68 aa3.08□□□□□ -1.92
ARHGEF28-210ENST00000510312 LCE2DQ5TA82 110 aaPredicted RBP3.06□□□□□ -1.92
ARHGEF28-210ENST00000510312 APOBP04114 4563 aaKnown RBP3.05□□□□□ -1.92
ARHGEF28-210ENST00000510312 MT4P47944 62 aa3.03□□□□□ -1.92
ARHGEF28-210ENST00000510312 MT1BP07438 61 aa3.03□□□□□ -1.92
ARHGEF28-210ENST00000510312 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.93
ARHGEF28-210ENST00000510312 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
ARHGEF28-210ENST00000510312 PKD1P98161 4303 aa3.01□□□□□ -1.93
ARHGEF28-210ENST00000510312 LPAP08519 4548 aa3.01□□□□□ -1.93
ARHGEF28-210ENST00000510312 HSPG2P98160 4391 aa3.01□□□□□ -1.93
ARHGEF28-210ENST00000510312 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
ARHGEF28-210ENST00000510312 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
ARHGEF28-210ENST00000510312 LRP1Q07954 4544 aaKnown RBP2.98□□□□□ -1.93
ARHGEF28-210ENST00000510312 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
ARHGEF28-210ENST00000510312 RYR1P21817 5038 aa2.95□□□□□ -1.94
ARHGEF28-210ENST00000510312 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
ARHGEF28-210ENST00000510312 KRTAP9-2Q9BYQ4 174 aa2.91□□□□□ -1.94
ARHGEF28-210ENST00000510312 DNHD1Q96M86 4753 aa2.9□□□□□ -1.94
ARHGEF28-210ENST00000510312 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
ARHGEF28-210ENST00000510312 MT1LQ93083 61 aa2.89□□□□□ -1.95
ARHGEF28-210ENST00000510312 TNXBP22105 4242 aa2.87□□□□□ -1.95
ARHGEF28-210ENST00000510312 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
ARHGEF28-210ENST00000510312 MUC17Q685J3 4493 aa2.84□□□□□ -1.96
ARHGEF28-210ENST00000510312 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
ARHGEF28-210ENST00000510312 RYR3Q15413 4870 aa2.82□□□□□ -1.96
ARHGEF28-210ENST00000510312 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
ARHGEF28-210ENST00000510312 HERC1Q15751 4861 aa2.81□□□□□ -1.96
ARHGEF28-210ENST00000510312 KRTAP9-6A0A140TA67 174 aa2.79□□□□□ -1.96
ARHGEF28-210ENST00000510312 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
ARHGEF28-210ENST00000510312 MT1EP04732 61 aa2.79□□□□□ -1.96
ARHGEF28-210ENST00000510312 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
ARHGEF28-210ENST00000510312 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
ARHGEF28-210ENST00000510312 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
ARHGEF28-210ENST00000510312 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
ARHGEF28-210ENST00000510312 MT1MQ8N339 61 aa2.74□□□□□ -1.97
ARHGEF28-210ENST00000510312 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 298 ms