RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 STAB1Q9NY15 2570 aa1.62□□□□□ -2.15
CALCOCO2-216ENST00000509784 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
CALCOCO2-216ENST00000509784 PP632Q6XCG6 107 aa1.62□□□□□ -2.15
CALCOCO2-216ENST00000509784 MRPL34Q9BQ48 92 aaKnown RBP1.62□□□□□ -2.15
CALCOCO2-216ENST00000509784 NOTCH1P46531 2555 aa1.62□□□□□ -2.15
CALCOCO2-216ENST00000509784 SRRM2Q9UQ35 2752 aaKnown RBP1.61□□□□□ -2.15
CALCOCO2-216ENST00000509784 C8orf87E5RJ46 101 aa1.61□□□□□ -2.15
CALCOCO2-216ENST00000509784 K7ERS5 55 aa1.61□□□□□ -2.15
CALCOCO2-216ENST00000509784 ADM2Q7Z4H4 148 aa1.61□□□□□ -2.15
CALCOCO2-216ENST00000509784 FBN1P35555 2871 aaKnown RBP1.61□□□□□ -2.15
CALCOCO2-216ENST00000509784 STARD9Q9P2P6 4700 aa1.61□□□□□ -2.15
CALCOCO2-216ENST00000509784 LINC00313P59037 77 aa1.6□□□□□ -2.15
CALCOCO2-216ENST00000509784 DMAC1Q96GE9 116 aa1.6□□□□□ -2.15
CALCOCO2-216ENST00000509784 HIVEP2P31629 2446 aa1.59□□□□□ -2.15
CALCOCO2-216ENST00000509784 SPATA8Q6RVD6 105 aa1.59□□□□□ -2.15
CALCOCO2-216ENST00000509784 R4GN34 69 aa1.59□□□□□ -2.15
CALCOCO2-216ENST00000509784 ACANP16112 2415 aa1.59□□□□□ -2.16
CALCOCO2-216ENST00000509784 K7EIL1 84 aa1.58□□□□□ -2.16
CALCOCO2-216ENST00000509784 ACYP2P14621 99 aa1.58□□□□□ -2.16
CALCOCO2-216ENST00000509784 SPACA4Q8TDM5 124 aa1.58□□□□□ -2.16
CALCOCO2-216ENST00000509784 PKHD1L1Q86WI1 4243 aa1.58□□□□□ -2.16
CALCOCO2-216ENST00000509784 PKD1P98161 4303 aa1.57□□□□□ -2.16
CALCOCO2-216ENST00000509784 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
CALCOCO2-216ENST00000509784 LINC01554Q52M75 96 aa1.57□□□□□ -2.16
CALCOCO2-216ENST00000509784 Q6ZRN7 208 aaPredicted RBP1.57□□□□□ -2.16
CALCOCO2-216ENST00000509784 UBE2DNLQ8IWF7 75 aa1.57□□□□□ -2.16
CALCOCO2-216ENST00000509784 LRP1BQ9NZR2 4599 aa1.57□□□□□ -2.16
CALCOCO2-216ENST00000509784 CSMD3Q7Z407 3707 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 A0A1B0GU69 56 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 P0C880 135 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 MIR22HGQ0VDD5 57 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 KRTAP25-1Q3LHN0 102 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 PSORS1C2Q9UIG4 136 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 APLNQ9ULZ1 77 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 COL7A1Q02388 2944 aa1.56□□□□□ -2.16
CALCOCO2-216ENST00000509784 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
CALCOCO2-216ENST00000509784 NBDYA0A0U1RRE5 68 aa1.55□□□□□ -2.16
CALCOCO2-216ENST00000509784 UQCR11O14957 56 aa1.55□□□□□ -2.16
CALCOCO2-216ENST00000509784 HSPG2P98160 4391 aa1.55□□□□□ -2.16
CALCOCO2-216ENST00000509784 SPINK6Q6UWN8 80 aa1.54□□□□□ -2.16
CALCOCO2-216ENST00000509784 KRTAP5-5Q701N2 237 aaPredicted RBP1.54□□□□□ -2.16
CALCOCO2-216ENST00000509784 RETNLBQ9BQ08 111 aa1.54□□□□□ -2.16
CALCOCO2-216ENST00000509784 KMT2AQ03164 3969 aa1.54□□□□□ -2.16
CALCOCO2-216ENST00000509784 TGP01266 2768 aa1.53□□□□□ -2.16
CALCOCO2-216ENST00000509784 A0A087WTM6 91 aa1.53□□□□□ -2.16
CALCOCO2-216ENST00000509784 CSAG1Q6PB30 78 aa1.53□□□□□ -2.16
CALCOCO2-216ENST00000509784 SSBP3-AS1Q7Z2R9 100 aa1.53□□□□□ -2.16
CALCOCO2-216ENST00000509784 PKHD1P08F94 4074 aa1.53□□□□□ -2.17
CALCOCO2-216ENST00000509784 STAB2Q8WWQ8 2551 aa1.53□□□□□ -2.17
CALCOCO2-216ENST00000509784 FAT1Q14517 4588 aa1.52□□□□□ -2.17
CALCOCO2-216ENST00000509784 MEGF8Q7Z7M0 2845 aa1.52□□□□□ -2.17
CALCOCO2-216ENST00000509784 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
CALCOCO2-216ENST00000509784 TNXBP22105 4242 aa1.51□□□□□ -2.17
CALCOCO2-216ENST00000509784 NUPR2A6NF83 97 aa1.51□□□□□ -2.17
CALCOCO2-216ENST00000509784 LY6G6CO95867 125 aa1.51□□□□□ -2.17
CALCOCO2-216ENST00000509784 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
CALCOCO2-216ENST00000509784 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
CALCOCO2-216ENST00000509784 A0A1B0GU33 70 aa1.5□□□□□ -2.17
CALCOCO2-216ENST00000509784 H0YAA0 97 aa1.5□□□□□ -2.17
CALCOCO2-216ENST00000509784 MYCBP2O75592 4640 aa1.49□□□□□ -2.17
CALCOCO2-216ENST00000509784 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
CALCOCO2-216ENST00000509784 LRP1Q07954 4544 aaKnown RBP1.48□□□□□ -2.17
CALCOCO2-216ENST00000509784 KRTAP10-1P60331 282 aa1.48□□□□□ -2.17
CALCOCO2-216ENST00000509784 H1FX-AS1Q4G0G2 97 aa1.48□□□□□ -2.17
CALCOCO2-216ENST00000509784 C1orf134Q5TEV5 83 aa1.48□□□□□ -2.17
CALCOCO2-216ENST00000509784 Q6ZSA8 131 aa1.48□□□□□ -2.17
CALCOCO2-216ENST00000509784 SPINK1P00995 79 aa1.47□□□□□ -2.17
CALCOCO2-216ENST00000509784 ROMO1P60602 79 aa1.47□□□□□ -2.17
CALCOCO2-216ENST00000509784 HYDINQ4G0P3 5121 aa1.46□□□□□ -2.18
CALCOCO2-216ENST00000509784 KMT2CQ8NEZ4 4911 aaKnown RBP1.46□□□□□ -2.18
CALCOCO2-216ENST00000509784 BIRC6Q9NR09 4857 aa1.45□□□□□ -2.18
CALCOCO2-216ENST00000509784 RPS29P62273 56 aaKnown RBP1.45□□□□□ -2.18
CALCOCO2-216ENST00000509784 C20orf166-AS1Q96NR2 134 aa1.45□□□□□ -2.18
CALCOCO2-216ENST00000509784 RYR3Q15413 4870 aa1.44□□□□□ -2.18
CALCOCO2-216ENST00000509784 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
CALCOCO2-216ENST00000509784 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
CALCOCO2-216ENST00000509784 COX6B2Q6YFQ2 88 aa1.43□□□□□ -2.18
CALCOCO2-216ENST00000509784 RYR2Q92736 4967 aa1.42□□□□□ -2.18
CALCOCO2-216ENST00000509784 PCLOQ9Y6V0 5065 aa1.42□□□□□ -2.18
CALCOCO2-216ENST00000509784 RYR1P21817 5038 aa1.4□□□□□ -2.19
CALCOCO2-216ENST00000509784 C9orf92A6NGG3 77 aa1.4□□□□□ -2.19
CALCOCO2-216ENST00000509784 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
CALCOCO2-216ENST00000509784 TPRXLQ17RH7 258 aa1.4□□□□□ -2.19
CALCOCO2-216ENST00000509784 CRIPTQ9P021 101 aa1.4□□□□□ -2.19
CALCOCO2-216ENST00000509784 HERC1Q15751 4861 aa1.39□□□□□ -2.19
CALCOCO2-216ENST00000509784 KRTAP13-4Q3LI77 160 aa1.39□□□□□ -2.19
CALCOCO2-216ENST00000509784 EPPK1P58107 5090 aaKnown RBP1.39□□□□□ -2.19
CALCOCO2-216ENST00000509784 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
CALCOCO2-216ENST00000509784 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
CALCOCO2-216ENST00000509784 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
CALCOCO2-216ENST00000509784 C10orf95Q9H7T3 257 aa1.37□□□□□ -2.19
CALCOCO2-216ENST00000509784 S4R3F8 94 aa1.37□□□□□ -2.19
CALCOCO2-216ENST00000509784 A0A0D9SG42 100 aa1.36□□□□□ -2.19
CALCOCO2-216ENST00000509784 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
CALCOCO2-216ENST00000509784 KRTAP12-1P59990 96 aa1.35□□□□□ -2.19
CALCOCO2-216ENST00000509784 HERC2O95714 4834 aa1.35□□□□□ -2.19
CALCOCO2-216ENST00000509784 MUC17Q685J3 4493 aa1.34□□□□□ -2.19
CALCOCO2-216ENST00000509784 M0QZ58 72 aa1.32□□□□□ -2.2
CALCOCO2-216ENST00000509784 UBR4Q5T4S7 5183 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms