RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 S4R3F8 94 aa4.66□□□□□ -1.66
UBE2D3-227ENST00000508818 K7EP34 96 aa4.65□□□□□ -1.67
UBE2D3-227ENST00000508818 PRO0461Q9UI25 63 aa4.64□□□□□ -1.67
UBE2D3-227ENST00000508818 GTF2H5Q6ZYL4 71 aa4.63□□□□□ -1.67
UBE2D3-227ENST00000508818 LCA10Q71F78 164 aa4.6□□□□□ -1.67
UBE2D3-227ENST00000508818 F8W1H4 67 aa4.59□□□□□ -1.67
UBE2D3-227ENST00000508818 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
UBE2D3-227ENST00000508818 Q5VV11 94 aa4.58□□□□□ -1.68
UBE2D3-227ENST00000508818 A6NN06 94 aa4.57□□□□□ -1.68
UBE2D3-227ENST00000508818 ETDBQ3ZM63 59 aa4.57□□□□□ -1.68
UBE2D3-227ENST00000508818 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
UBE2D3-227ENST00000508818 KLKP1Q107X0 134 aa4.53□□□□□ -1.68
UBE2D3-227ENST00000508818 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
UBE2D3-227ENST00000508818 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
UBE2D3-227ENST00000508818 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
UBE2D3-227ENST00000508818 PCP4L1A6NKN8 68 aa4.52□□□□□ -1.69
UBE2D3-227ENST00000508818 ACYP1P07311 99 aa4.5□□□□□ -1.69
UBE2D3-227ENST00000508818 MT1BP07438 61 aa4.5□□□□□ -1.69
UBE2D3-227ENST00000508818 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
UBE2D3-227ENST00000508818 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
UBE2D3-227ENST00000508818 CRIPTQ9P021 101 aa4.49□□□□□ -1.69
UBE2D3-227ENST00000508818 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
UBE2D3-227ENST00000508818 ATOX1O00244 68 aa4.47□□□□□ -1.69
UBE2D3-227ENST00000508818 UQCRQO14949 82 aa4.47□□□□□ -1.69
UBE2D3-227ENST00000508818 NDUFC1O43677 76 aa4.47□□□□□ -1.69
UBE2D3-227ENST00000508818 ATP5EP2Q5VTU8 51 aa4.47□□□□□ -1.69
UBE2D3-227ENST00000508818 A0A087WVE0 104 aa4.45□□□□□ -1.7
UBE2D3-227ENST00000508818 H0Y9P7 68 aa4.45□□□□□ -1.7
UBE2D3-227ENST00000508818 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
UBE2D3-227ENST00000508818 FAM240AA0A1B0GVK7 77 aa4.43□□□□□ -1.7
UBE2D3-227ENST00000508818 NEBP20929 6669 aa4.41□□□□□ -1.7
UBE2D3-227ENST00000508818 A8MUN3 132 aa4.4□□□□□ -1.71
UBE2D3-227ENST00000508818 H0YAA0 97 aa4.38□□□□□ -1.71
UBE2D3-227ENST00000508818 MP68P56378 58 aa4.38□□□□□ -1.71
UBE2D3-227ENST00000508818 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
UBE2D3-227ENST00000508818 LINC00643Q86TS7 51 aa4.38□□□□□ -1.71
UBE2D3-227ENST00000508818 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
UBE2D3-227ENST00000508818 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
UBE2D3-227ENST00000508818 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
UBE2D3-227ENST00000508818 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
UBE2D3-227ENST00000508818 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
UBE2D3-227ENST00000508818 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
UBE2D3-227ENST00000508818 C20orf197Q8N268 126 aa4.3□□□□□ -1.72
UBE2D3-227ENST00000508818 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
UBE2D3-227ENST00000508818 R4GN34 69 aa4.29□□□□□ -1.72
UBE2D3-227ENST00000508818 SCGB1A1P11684 91 aa4.28□□□□□ -1.72
UBE2D3-227ENST00000508818 H3BPC8 53 aa4.27□□□□□ -1.73
UBE2D3-227ENST00000508818 J3QR89 54 aa4.25□□□□□ -1.73
UBE2D3-227ENST00000508818 M0QZ58 72 aa4.24□□□□□ -1.73
UBE2D3-227ENST00000508818 KMT2DO14686 5537 aa4.24□□□□□ -1.73
UBE2D3-227ENST00000508818 P0C880 135 aa4.23□□□□□ -1.73
UBE2D3-227ENST00000508818 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
UBE2D3-227ENST00000508818 A0A1B0GV90 55 aa4.22□□□□□ -1.73
UBE2D3-227ENST00000508818 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
UBE2D3-227ENST00000508818 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
UBE2D3-227ENST00000508818 MT1XP80297 61 aa4.21□□□□□ -1.74
UBE2D3-227ENST00000508818 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
UBE2D3-227ENST00000508818 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
UBE2D3-227ENST00000508818 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
UBE2D3-227ENST00000508818 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
UBE2D3-227ENST00000508818 SPRR2EP22531 72 aa4.17□□□□□ -1.74
UBE2D3-227ENST00000508818 SPRR2BP35325 72 aa4.17□□□□□ -1.74
UBE2D3-227ENST00000508818 SPRR2AP35326 72 aa4.17□□□□□ -1.74
UBE2D3-227ENST00000508818 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
UBE2D3-227ENST00000508818 ACYP2P14621 99 aa4.16□□□□□ -1.74
UBE2D3-227ENST00000508818 TRAV7A0A075B6U4 112 aa4.15□□□□□ -1.75
UBE2D3-227ENST00000508818 SPTSSBQ8NFR3 76 aa4.15□□□□□ -1.75
UBE2D3-227ENST00000508818 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
UBE2D3-227ENST00000508818 MT-ATP8P03928 68 aa4.13□□□□□ -1.75
UBE2D3-227ENST00000508818 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
UBE2D3-227ENST00000508818 SMIM20Q8N5G0 67 aa4.1□□□□□ -1.75
UBE2D3-227ENST00000508818 SPRR2DP22532 72 aa4.04□□□□□ -1.76
UBE2D3-227ENST00000508818 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-227ENST00000508818 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
UBE2D3-227ENST00000508818 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
UBE2D3-227ENST00000508818 K7ERU9 68 aa4.02□□□□□ -1.77
UBE2D3-227ENST00000508818 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
UBE2D3-227ENST00000508818 SNURFQ9Y675 71 aa4.01□□□□□ -1.77
UBE2D3-227ENST00000508818 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
UBE2D3-227ENST00000508818 SPANXA2-OT1Q8N9U9 137 aa3.96□□□□□ -1.78
UBE2D3-227ENST00000508818 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
UBE2D3-227ENST00000508818 SEC61GP60059 68 aa3.9□□□□□ -1.79
UBE2D3-227ENST00000508818 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
UBE2D3-227ENST00000508818 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
UBE2D3-227ENST00000508818 SERP1Q9Y6X1 66 aa3.89□□□□□ -1.79
UBE2D3-227ENST00000508818 COA5Q86WW8 74 aa3.86□□□□□ -1.79
UBE2D3-227ENST00000508818 A0A0D9SG42 100 aa3.85□□□□□ -1.79
UBE2D3-227ENST00000508818 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
UBE2D3-227ENST00000508818 MT3P25713 68 aa3.82□□□□□ -1.8
UBE2D3-227ENST00000508818 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
UBE2D3-227ENST00000508818 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
UBE2D3-227ENST00000508818 A0A1B0GU33 70 aa3.79□□□□□ -1.8
UBE2D3-227ENST00000508818 SPATA8Q6RVD6 105 aa3.79□□□□□ -1.8
UBE2D3-227ENST00000508818 COX7CP15954 63 aa3.76□□□□□ -1.81
UBE2D3-227ENST00000508818 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
UBE2D3-227ENST00000508818 MT1EP04732 61 aa3.75□□□□□ -1.81
UBE2D3-227ENST00000508818 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
UBE2D3-227ENST00000508818 SMIM26A0A096LP01 95 aa3.71□□□□□ -1.82
UBE2D3-227ENST00000508818 A0A1B0GU69 56 aa3.7□□□□□ -1.82
UBE2D3-227ENST00000508818 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms