RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ANKRD11Q6UB99 2663 aaPredicted RBP0.63□□□□□ -2.31
SMARCA5-202ENST00000508573 CELSR3Q9NYQ7 3312 aa0.63□□□□□ -2.31
SMARCA5-202ENST00000508573 HIVEP1P15822 2718 aa0.62□□□□□ -2.31
SMARCA5-202ENST00000508573 FASNP49327 2511 aaKnown RBP0.62□□□□□ -2.31
SMARCA5-202ENST00000508573 DNAH1Q9P2D7 4330 aa0.61□□□□□ -2.31
SMARCA5-202ENST00000508573 MT1AP04731 61 aa0.61□□□□□ -2.31
SMARCA5-202ENST00000508573 SPRR2AP35326 72 aa0.61□□□□□ -2.31
SMARCA5-202ENST00000508573 DNAH10Q8IVF4 4471 aa0.61□□□□□ -2.31
SMARCA5-202ENST00000508573 RELNP78509 3460 aa0.61□□□□□ -2.31
SMARCA5-202ENST00000508573 FAT1Q14517 4588 aa0.6□□□□□ -2.31
SMARCA5-202ENST00000508573 TEP1Q99973 2627 aaKnown RBP0.6□□□□□ -2.31
SMARCA5-202ENST00000508573 KALRNO60229 2985 aa0.59□□□□□ -2.31
SMARCA5-202ENST00000508573 PKHD1P08F94 4074 aa0.59□□□□□ -2.32
SMARCA5-202ENST00000508573 ITPR3Q14573 2671 aa0.59□□□□□ -2.32
SMARCA5-202ENST00000508573 PLECQ15149 4684 aaKnown RBP0.58□□□□□ -2.32
SMARCA5-202ENST00000508573 DEFB108AA8MXU0 73 aa0.58□□□□□ -2.32
SMARCA5-202ENST00000508573 MYO18BQ8IUG5 2567 aa0.58□□□□□ -2.32
SMARCA5-202ENST00000508573 MGAQ8IWI9 3026 aa0.58□□□□□ -2.32
SMARCA5-202ENST00000508573 TLN2Q9Y4G6 2542 aa0.58□□□□□ -2.32
SMARCA5-202ENST00000508573 ZANQ9Y493 2812 aa0.57□□□□□ -2.32
SMARCA5-202ENST00000508573 SMR3BP02814 79 aaPredicted RBP0.57□□□□□ -2.32
SMARCA5-202ENST00000508573 KRTAP19-5Q3LI72 72 aa0.57□□□□□ -2.32
SMARCA5-202ENST00000508573 TRIOO75962 3097 aa0.57□□□□□ -2.32
SMARCA5-202ENST00000508573 NBEAQ8NFP9 2946 aa0.56□□□□□ -2.32
SMARCA5-202ENST00000508573 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
SMARCA5-202ENST00000508573 COL6A3P12111 3177 aa0.56□□□□□ -2.32
SMARCA5-202ENST00000508573 AKAP9Q99996 3911 aa0.56□□□□□ -2.32
SMARCA5-202ENST00000508573 MAST4O15021 2626 aa0.55□□□□□ -2.32
SMARCA5-202ENST00000508573 SVEP1Q4LDE5 3571 aa0.55□□□□□ -2.32
SMARCA5-202ENST00000508573 HMCN2Q8NDA2 5059 aa0.55□□□□□ -2.32
SMARCA5-202ENST00000508573 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
SMARCA5-202ENST00000508573 USP9XQ93008 2570 aaPredicted RBP0.53□□□□□ -2.32
SMARCA5-202ENST00000508573 CEP250Q9BV73 2442 aa0.53□□□□□ -2.32
SMARCA5-202ENST00000508573 A0A096LNI7 61 aa0.53□□□□□ -2.32
SMARCA5-202ENST00000508573 SPRR2EP22531 72 aa0.53□□□□□ -2.32
SMARCA5-202ENST00000508573 SPRR2FQ96RM1 72 aa0.53□□□□□ -2.32
SMARCA5-202ENST00000508573 CFAP54Q96N23 3096 aa0.52□□□□□ -2.33
SMARCA5-202ENST00000508573 CSMD1Q96PZ7 3565 aa0.52□□□□□ -2.33
SMARCA5-202ENST00000508573 RHPN1-AS1Q9BWJ2 59 aa0.52□□□□□ -2.33
SMARCA5-202ENST00000508573 HTTP42858 3142 aa0.52□□□□□ -2.33
SMARCA5-202ENST00000508573 TGP01266 2768 aa0.51□□□□□ -2.33
SMARCA5-202ENST00000508573 LAMA1P25391 3075 aa0.51□□□□□ -2.33
SMARCA5-202ENST00000508573 DMXL2Q8TDJ6 3036 aa0.5□□□□□ -2.33
SMARCA5-202ENST00000508573 HERC1Q15751 4861 aa0.49□□□□□ -2.33
SMARCA5-202ENST00000508573 WDR87Q6ZQQ6 2873 aa0.49□□□□□ -2.33
SMARCA5-202ENST00000508573 H3BUX3 64 aa0.49□□□□□ -2.33
SMARCA5-202ENST00000508573 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
SMARCA5-202ENST00000508573 DEFB1P60022 68 aa0.48□□□□□ -2.33
SMARCA5-202ENST00000508573 DYNC1H1Q14204 4646 aaKnown RBP0.48□□□□□ -2.33
SMARCA5-202ENST00000508573 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
SMARCA5-202ENST00000508573 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
SMARCA5-202ENST00000508573 LRP2P98164 4655 aa0.46□□□□□ -2.34
SMARCA5-202ENST00000508573 CMYA5Q8N3K9 4069 aa0.45□□□□□ -2.34
SMARCA5-202ENST00000508573 FLNAP21333 2647 aaKnown RBP0.45□□□□□ -2.34
SMARCA5-202ENST00000508573 APELAP0DMC3 54 aa0.45□□□□□ -2.34
SMARCA5-202ENST00000508573 DEFB136Q30KP8 78 aa0.45□□□□□ -2.34
SMARCA5-202ENST00000508573 LAMA3Q16787 3333 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 DNAH17Q9UFH2 4485 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 MXRA5Q9NR99 2828 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 ITPR1Q14643 2758 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 GPR98Q8WXG9 6306 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 ATMQ13315 3056 aa0.44□□□□□ -2.34
SMARCA5-202ENST00000508573 ADGRG4Q8IZF6 3080 aa0.43□□□□□ -2.34
SMARCA5-202ENST00000508573 MAP1AP78559 2803 aaPredicted RBP0.43□□□□□ -2.34
SMARCA5-202ENST00000508573 DEFB124Q8NES8 71 aa0.42□□□□□ -2.34
SMARCA5-202ENST00000508573 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
SMARCA5-202ENST00000508573 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
SMARCA5-202ENST00000508573 SPTAN1Q13813 2472 aaKnown RBP0.41□□□□□ -2.34
SMARCA5-202ENST00000508573 DOPEY1Q5JWR5 2465 aa0.4□□□□□ -2.35
SMARCA5-202ENST00000508573 TRRAPQ9Y4A5 3859 aa0.39□□□□□ -2.35
SMARCA5-202ENST00000508573 MUC17Q685J3 4493 aa0.39□□□□□ -2.35
SMARCA5-202ENST00000508573 TEX15Q9BXT5 2789 aa0.38□□□□□ -2.35
SMARCA5-202ENST00000508573 HTN1P15515 57 aa0.38□□□□□ -2.35
SMARCA5-202ENST00000508573 SZT2Q5T011 3432 aa0.38□□□□□ -2.35
SMARCA5-202ENST00000508573 FRYLO94915 3013 aa0.37□□□□□ -2.35
SMARCA5-202ENST00000508573 SMG1Q96Q15 3661 aaKnown RBP0.37□□□□□ -2.35
SMARCA5-202ENST00000508573 C5orf42Q9H799 3197 aa0.36□□□□□ -2.35
SMARCA5-202ENST00000508573 NIPBLQ6KC79 2804 aaeCLIP0.36□□□□□ -2.35
SMARCA5-202ENST00000508573 LRBAP50851 2863 aa0.35□□□□□ -2.35
SMARCA5-202ENST00000508573 STAB2Q8WWQ8 2551 aa0.35□□□□□ -2.35
SMARCA5-202ENST00000508573 PRUNE2Q8WUY3 3088 aa0.34□□□□□ -2.35
SMARCA5-202ENST00000508573 NBEAL1Q6ZS30 2694 aa0.34□□□□□ -2.36
SMARCA5-202ENST00000508573 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
SMARCA5-202ENST00000508573 DEFB133Q30KQ1 61 aa0.31□□□□□ -2.36
SMARCA5-202ENST00000508573 DNAH12Q6ZR08 3092 aa0.31□□□□□ -2.36
SMARCA5-202ENST00000508573 DMDP11532 3685 aa0.3□□□□□ -2.36
SMARCA5-202ENST00000508573 MKI67P46013 3256 aaKnown RBP0.29□□□□□ -2.36
SMARCA5-202ENST00000508573 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
SMARCA5-202ENST00000508573 ITPR2Q14571 2701 aa0.28□□□□□ -2.36
SMARCA5-202ENST00000508573 MT1HP80294 61 aa0.28□□□□□ -2.36
SMARCA5-202ENST00000508573 MUC3AQ02505 3323 aa0.28□□□□□ -2.36
SMARCA5-202ENST00000508573 CSMD2Q7Z408 3487 aa0.28□□□□□ -2.36
SMARCA5-202ENST00000508573 KMT2DO14686 5537 aa0.27□□□□□ -2.37
SMARCA5-202ENST00000508573 CFAP46Q8IYW2 2715 aa0.26□□□□□ -2.37
SMARCA5-202ENST00000508573 MT1EP04732 61 aa0.26□□□□□ -2.37
SMARCA5-202ENST00000508573 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
SMARCA5-202ENST00000508573 FSIP2Q5CZC0 6907 aa0.25□□□□□ -2.37
SMARCA5-202ENST00000508573 STARD9Q9P2P6 4700 aa0.25□□□□□ -2.37
SMARCA5-202ENST00000508573 SSPOA2VEC9 5147 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms