RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ANKRD29Q8N6D5 301 aa0.89□□□□□ -2.27
TOPBP1-206ENST00000508524 LINC00575Q6W349 94 aa0.88□□□□□ -2.27
TOPBP1-206ENST00000508524 KTN1-AS1Q86SY8 53 aa0.88□□□□□ -2.27
TOPBP1-206ENST00000508524 SMIM11BQ8TCY0 68 aa0.88□□□□□ -2.27
TOPBP1-206ENST00000508524 TRAV12-1A0A0B4J245 112 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 A0A1B0GW54 56 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 LINC01549A6NIU2 74 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 ZNF815PA8K554 130 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BOP23527 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BBP33778 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BDP58876 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BCP62807 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST2H2BEQ16778 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 S100ZQ8WXG8 99 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BHQ93079 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BNQ99877 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H2BMQ99879 126 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 PMCHL2Q9BQD1 86 aa0.87□□□□□ -2.27
TOPBP1-206ENST00000508524 C3orf79P0CE67 100 aa0.86□□□□□ -2.27
TOPBP1-206ENST00000508524 PDE6GP18545 87 aa0.86□□□□□ -2.27
TOPBP1-206ENST00000508524 TMEM258P61165 79 aa0.86□□□□□ -2.27
TOPBP1-206ENST00000508524 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.86□□□□□ -2.27
TOPBP1-206ENST00000508524 C18orf32Q8TCD1 76 aa0.86□□□□□ -2.27
TOPBP1-206ENST00000508524 RAB37Q96AX2 223 aa0.86□□□□□ -2.27
TOPBP1-206ENST00000508524 hADV29S1A0JD25 119 aa0.85□□□□□ -2.27
TOPBP1-206ENST00000508524 IFI27L1Q96BM0 104 aa0.85□□□□□ -2.27
TOPBP1-206ENST00000508524 SNHG12Q9BXW3 62 aa0.85□□□□□ -2.27
TOPBP1-206ENST00000508524 SMCO4Q9NRQ5 59 aa0.85□□□□□ -2.27
TOPBP1-206ENST00000508524 A0A1B0GV72 72 aa0.84□□□□□ -2.27
TOPBP1-206ENST00000508524 K7EQZ3 153 aa0.84□□□□□ -2.27
TOPBP1-206ENST00000508524 HIST1H4AP62805 103 aaKnown RBP0.84□□□□□ -2.27
TOPBP1-206ENST00000508524 LYRM7Q5U5X0 104 aa0.84□□□□□ -2.27
TOPBP1-206ENST00000508524 C7orf65Q6ZTY9 151 aa0.84□□□□□ -2.27
TOPBP1-206ENST00000508524 TIMM17BO60830 172 aa0.83□□□□□ -2.28
TOPBP1-206ENST00000508524 DSCR8Q96T75 97 aa0.83□□□□□ -2.28
TOPBP1-206ENST00000508524 TRBV7-4A0A0J9YYF1 115 aa0.82□□□□□ -2.28
TOPBP1-206ENST00000508524 H3BMG7 143 aa0.82□□□□□ -2.28
TOPBP1-206ENST00000508524 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
TOPBP1-206ENST00000508524 LINC01554Q52M75 96 aa0.82□□□□□ -2.28
TOPBP1-206ENST00000508524 PPDPFLQ8WWR9 84 aa0.82□□□□□ -2.28
TOPBP1-206ENST00000508524 NAA38Q9BRA0 125 aaKnown RBP0.82□□□□□ -2.28
TOPBP1-206ENST00000508524 KRTAP6-1Q3LI64 71 aa0.81□□□□□ -2.28
TOPBP1-206ENST00000508524 Q6ZQT0 140 aa0.81□□□□□ -2.28
TOPBP1-206ENST00000508524 COA5Q86WW8 74 aa0.81□□□□□ -2.28
TOPBP1-206ENST00000508524 HIST3H2BBQ8N257 126 aa0.81□□□□□ -2.28
TOPBP1-206ENST00000508524 HSPB8Q9UJY1 196 aa0.81□□□□□ -2.28
TOPBP1-206ENST00000508524 MMP24-AS1A0A0U1RRL7 71 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 M0QZ58 72 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 DPM2O94777 84 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 MT-ND4LP03901 98 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 PLNP26678 52 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 FXYD2P54710 66 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 MUSTN1Q8IVN3 82 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 SEC11CQ9BY50 192 aa0.8□□□□□ -2.28
TOPBP1-206ENST00000508524 IGKCP01834 107 aa0.79□□□□□ -2.28
TOPBP1-206ENST00000508524 CCKP06307 115 aa0.79□□□□□ -2.28
TOPBP1-206ENST00000508524 Q1T7F1 81 aa0.79□□□□□ -2.28
TOPBP1-206ENST00000508524 SMIM20Q8N5G0 67 aa0.79□□□□□ -2.28
TOPBP1-206ENST00000508524 MRPL34Q9BQ48 92 aaKnown RBP0.79□□□□□ -2.28
TOPBP1-206ENST00000508524 TRACP01848 142 aa0.78□□□□□ -2.28
TOPBP1-206ENST00000508524 PEA15Q15121 130 aa0.78□□□□□ -2.28
TOPBP1-206ENST00000508524 NDUFA5Q16718 116 aa0.78□□□□□ -2.28
TOPBP1-206ENST00000508524 TCTE3Q8IZS6 198 aa0.78□□□□□ -2.28
TOPBP1-206ENST00000508524 HIST1H2BLQ99880 126 aa0.78□□□□□ -2.28
TOPBP1-206ENST00000508524 A0A0D9SG42 100 aa0.77□□□□□ -2.29
TOPBP1-206ENST00000508524 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
TOPBP1-206ENST00000508524 FABP2P12104 132 aa0.77□□□□□ -2.29
TOPBP1-206ENST00000508524 TMEM254Q8TBM7 123 aa0.77□□□□□ -2.29
TOPBP1-206ENST00000508524 A0A1W2PPM0 123 aa0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 TMEM256-PLSCR3K7ERE1 68 aa0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 TAX1BP3O14907 124 aa0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 IFITM1P13164 125 aa0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 CHCHD1Q96BP2 118 aaKnown RBP0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 C12orf57Q99622 126 aa0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 C10orf95Q9H7T3 257 aa0.76□□□□□ -2.29
TOPBP1-206ENST00000508524 hDV103S1A0JD37 113 aa0.75□□□□□ -2.29
TOPBP1-206ENST00000508524 J3KT08 172 aa0.75□□□□□ -2.29
TOPBP1-206ENST00000508524 TRGC2P03986 189 aa0.75□□□□□ -2.29
TOPBP1-206ENST00000508524 MT1AP04731 61 aa0.75□□□□□ -2.29
TOPBP1-206ENST00000508524 FABP4P15090 132 aa0.75□□□□□ -2.29
TOPBP1-206ENST00000508524 VPS25Q9BRG1 176 aa0.75□□□□□ -2.29
TOPBP1-206ENST00000508524 HCG22E2RYF7 251 aa0.74□□□□□ -2.29
TOPBP1-206ENST00000508524 K7EP34 96 aa0.74□□□□□ -2.29
TOPBP1-206ENST00000508524 NDUFB1O75438 58 aa0.74□□□□□ -2.29
TOPBP1-206ENST00000508524 LEPROTL1O95214 131 aa0.74□□□□□ -2.29
TOPBP1-206ENST00000508524 K7ERJ3 54 aa0.73□□□□□ -2.29
TOPBP1-206ENST00000508524 BVES-AS1Q5T3Y7 98 aa0.73□□□□□ -2.29
TOPBP1-206ENST00000508524 NDUFC1O43677 76 aa0.72□□□□□ -2.29
TOPBP1-206ENST00000508524 LINC01545Q5VT33 79 aa0.72□□□□□ -2.29
TOPBP1-206ENST00000508524 SYS1-DBNDD2H3BUS1 97 aa0.71□□□□□ -2.3
TOPBP1-206ENST00000508524 BAALC-AS2P0C853 105 aa0.71□□□□□ -2.3
TOPBP1-206ENST00000508524 S100PP25815 95 aa0.71□□□□□ -2.3
TOPBP1-206ENST00000508524 ROMO1P60602 79 aa0.71□□□□□ -2.3
TOPBP1-206ENST00000508524 COPS9Q8WXC6 57 aa0.7□□□□□ -2.3
TOPBP1-206ENST00000508524 C14orf132Q9NPU4 83 aa0.7□□□□□ -2.3
TOPBP1-206ENST00000508524 ATOH7Q8N100 152 aa0.69□□□□□ -2.3
TOPBP1-206ENST00000508524 TMEM218A2RU14 115 aa0.68□□□□□ -2.3
TOPBP1-206ENST00000508524 H0YGX0 51 aa0.68□□□□□ -2.3
TOPBP1-206ENST00000508524 CYP4F30PQ9H0H9 118 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms