RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PIGYQ3MUY2 71 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 DEFB106AQ8N104 65 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 CNFNQ9BYD5 112 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 CDKN2A-AS1Q9UH64 79 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 CSMD3Q7Z407 3707 aa1.23□□□□□ -2.21
UBE2D3-225ENST00000508476 IAPPP10997 89 aa1.22□□□□□ -2.21
UBE2D3-225ENST00000508476 RPL37P61927 97 aaKnown RBP1.22□□□□□ -2.21
UBE2D3-225ENST00000508476 MUC2Q02817 5179 aa1.21□□□□□ -2.22
UBE2D3-225ENST00000508476 LYNX1G3V0Z9 82 aa1.21□□□□□ -2.22
UBE2D3-225ENST00000508476 H0YGG7 62 aa1.21□□□□□ -2.22
UBE2D3-225ENST00000508476 K7EQZ3 153 aa1.21□□□□□ -2.22
UBE2D3-225ENST00000508476 LYNX1P0DP58 116 aa1.21□□□□□ -2.22
UBE2D3-225ENST00000508476 RNF213Q63HN8 5207 aa1.21□□□□□ -2.22
UBE2D3-225ENST00000508476 LELP1Q5T871 98 aa1.2□□□□□ -2.22
UBE2D3-225ENST00000508476 MINOS1Q5TGZ0 78 aa1.2□□□□□ -2.22
UBE2D3-225ENST00000508476 DEFB108BQ8NET1 73 aa1.2□□□□□ -2.22
UBE2D3-225ENST00000508476 KMT2AQ03164 3969 aa1.19□□□□□ -2.22
UBE2D3-225ENST00000508476 PKHD1P08F94 4074 aa1.19□□□□□ -2.22
UBE2D3-225ENST00000508476 Q5VSD8 79 aa1.19□□□□□ -2.22
UBE2D3-225ENST00000508476 ARHGAP5-AS1Q96IT6 56 aa1.19□□□□□ -2.22
UBE2D3-225ENST00000508476 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
UBE2D3-225ENST00000508476 C6orf48Q9UBA6 75 aa1.19□□□□□ -2.22
UBE2D3-225ENST00000508476 HSPG2P98160 4391 aa1.18□□□□□ -2.22
UBE2D3-225ENST00000508476 LYSTQ99698 3801 aa1.17□□□□□ -2.22
UBE2D3-225ENST00000508476 HECTD4Q9Y4D8 3996 aa1.17□□□□□ -2.22
UBE2D3-225ENST00000508476 DEFB104AQ8WTQ1 72 aa1.16□□□□□ -2.22
UBE2D3-225ENST00000508476 HUWE1Q7Z6Z7 4374 aaKnown RBP1.15□□□□□ -2.22
UBE2D3-225ENST00000508476 PRB3Q04118 309 aaPredicted RBP1.15□□□□□ -2.23
UBE2D3-225ENST00000508476 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
UBE2D3-225ENST00000508476 DNAH3Q8TD57 4116 aa1.14□□□□□ -2.23
UBE2D3-225ENST00000508476 HMCN2Q8NDA2 5059 aa1.14□□□□□ -2.23
UBE2D3-225ENST00000508476 SMR3BP02814 79 aaPredicted RBP1.14□□□□□ -2.23
UBE2D3-225ENST00000508476 DNAH10Q8IVF4 4471 aa1.14□□□□□ -2.23
UBE2D3-225ENST00000508476 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
UBE2D3-225ENST00000508476 DNAH7Q8WXX0 4024 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 STARD9Q9P2P6 4700 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 ALMS1Q8TCU4 4167 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 H3BUA1 57 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 H3BUX3 64 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 I3L2K1 104 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 POLR2KP53803 58 aaKnown RBP1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 DEFB131AP59861 70 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 LINC01590Q5TEZ4 76 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 TTTY10Q9BZA0 68 aa1.13□□□□□ -2.23
UBE2D3-225ENST00000508476 IGLV5-48A0A075B6I7 105 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 H3BSH0 61 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 RPS27LQ71UM5 84 aaKnown RBP1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 WFDC10BQ8IUB3 73 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 APLNQ9ULZ1 77 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 NEBP20929 6669 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 DYNC1H1Q14204 4646 aaKnown RBP1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 DNAH11Q96DT5 4516 aa1.12□□□□□ -2.23
UBE2D3-225ENST00000508476 COX6A2Q02221 97 aa1.11□□□□□ -2.23
UBE2D3-225ENST00000508476 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
UBE2D3-225ENST00000508476 WFDC13Q8IUB5 93 aa1.11□□□□□ -2.23
UBE2D3-225ENST00000508476 MYCBP2O75592 4640 aa1.11□□□□□ -2.23
UBE2D3-225ENST00000508476 LRP2P98164 4655 aa1.1□□□□□ -2.23
UBE2D3-225ENST00000508476 H0YAA0 97 aa1.1□□□□□ -2.23
UBE2D3-225ENST00000508476 RPL39P62891 51 aaKnown RBP1.1□□□□□ -2.23
UBE2D3-225ENST00000508476 H1FX-AS1Q4G0G2 97 aa1.1□□□□□ -2.23
UBE2D3-225ENST00000508476 Q6ZSA8 131 aa1.1□□□□□ -2.23
UBE2D3-225ENST00000508476 PLECQ15149 4684 aaKnown RBP1.1□□□□□ -2.23
UBE2D3-225ENST00000508476 FAT2Q9NYQ8 4349 aa1.09□□□□□ -2.23
UBE2D3-225ENST00000508476 PRCDQ00LT1 54 aa1.09□□□□□ -2.23
UBE2D3-225ENST00000508476 SPINK9Q5DT21 86 aa1.09□□□□□ -2.23
UBE2D3-225ENST00000508476 KAAG1Q9UBP8 84 aa1.09□□□□□ -2.23
UBE2D3-225ENST00000508476 FAT1Q14517 4588 aa1.09□□□□□ -2.23
UBE2D3-225ENST00000508476 DNAH6Q9C0G6 4158 aa1.09□□□□□ -2.24
UBE2D3-225ENST00000508476 VPS13DQ5THJ4 4388 aa1.08□□□□□ -2.24
UBE2D3-225ENST00000508476 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
UBE2D3-225ENST00000508476 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
UBE2D3-225ENST00000508476 RPS27P42677 84 aaKnown RBP1.08□□□□□ -2.24
UBE2D3-225ENST00000508476 WT1-ASQ06250 92 aa1.08□□□□□ -2.24
UBE2D3-225ENST00000508476 RPL39LQ96EH5 51 aaKnown RBP1.08□□□□□ -2.24
UBE2D3-225ENST00000508476 APOBP04114 4563 aaKnown RBP1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 MT1HL1P0DM35 61 aa1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 DEFB130BP0DP73 79 aa1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 DEFB130AP0DP74 79 aa1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 DEFB136Q30KP8 78 aa1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 DEFB105AQ8NG35 78 aa1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 DNAH17Q9UFH2 4485 aa1.07□□□□□ -2.24
UBE2D3-225ENST00000508476 NOP10Q9NPE3 64 aaKnown RBP1.06□□□□□ -2.24
UBE2D3-225ENST00000508476 DNAH2Q9P225 4427 aa1.06□□□□□ -2.24
UBE2D3-225ENST00000508476 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
UBE2D3-225ENST00000508476 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
UBE2D3-225ENST00000508476 LRP1BQ9NZR2 4599 aa1.05□□□□□ -2.24
UBE2D3-225ENST00000508476 SPRR1AP35321 89 aa1.05□□□□□ -2.24
UBE2D3-225ENST00000508476 C10orf95Q9H7T3 257 aa1.05□□□□□ -2.24
UBE2D3-225ENST00000508476 VPS13BQ7Z7G8 4022 aa1.05□□□□□ -2.24
UBE2D3-225ENST00000508476 PKD1P98161 4303 aa1.04□□□□□ -2.24
UBE2D3-225ENST00000508476 SSPOA2VEC9 5147 aa1.04□□□□□ -2.24
UBE2D3-225ENST00000508476 FAT3Q8TDW7 4589 aa1.04□□□□□ -2.24
UBE2D3-225ENST00000508476 MMP24-AS1A0A0U1RRL7 71 aa1.04□□□□□ -2.24
UBE2D3-225ENST00000508476 M0QY20 66 aa1.04□□□□□ -2.24
UBE2D3-225ENST00000508476 TOMM7Q9P0U1 55 aa1.04□□□□□ -2.24
UBE2D3-225ENST00000508476 KRTAP2-3P0C7H8 128 aa1.03□□□□□ -2.24
UBE2D3-225ENST00000508476 PRLHP81277 87 aa1.03□□□□□ -2.24
UBE2D3-225ENST00000508476 DEFB135Q30KP9 77 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms