RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 DNHD1Q96M86 4753 aa-0.58□□□□□ -2.5
SMN2-208ENST00000508258 M0QY20 66 aa-0.58□□□□□ -2.5
SMN2-208ENST00000508258 TMEM167BQ9NRX6 74 aa-0.58□□□□□ -2.5
SMN2-208ENST00000508258 A0A1B0GUL6 1792 aa-0.58□□□□□ -2.5
SMN2-208ENST00000508258 UGGT1Q9NYU2 1555 aa-0.58□□□□□ -2.5
SMN2-208ENST00000508258 COL12A1Q99715 3063 aa-0.58□□□□□ -2.5
SMN2-208ENST00000508258 FAM208AQ9UK61 1670 aaKnown RBP-0.59□□□□□ -2.5
SMN2-208ENST00000508258 LINC00308Q8TCZ7 52 aa-0.59□□□□□ -2.5
SMN2-208ENST00000508258 DYNC1H1Q14204 4646 aaKnown RBP-0.59□□□□□ -2.5
SMN2-208ENST00000508258 TLN2Q9Y4G6 2542 aa-0.6□□□□□ -2.5
SMN2-208ENST00000508258 M0QZ58 72 aa-0.6□□□□□ -2.51
SMN2-208ENST00000508258 DNAH7Q8WXX0 4024 aa-0.6□□□□□ -2.51
SMN2-208ENST00000508258 RIF1Q5UIP0 2472 aaKnown RBP-0.6□□□□□ -2.51
SMN2-208ENST00000508258 KIF21BO75037 1637 aa-0.6□□□□□ -2.51
SMN2-208ENST00000508258 C5orf42Q9H799 3197 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 RNF213Q63HN8 5207 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 DNAH10Q8IVF4 4471 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 A8MTW9 85 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 KAAG1Q9UBP8 84 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 CPS1P31327 1500 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 EFCAB6Q5THR3 1501 aa-0.61□□□□□ -2.51
SMN2-208ENST00000508258 LAMA2P24043 3122 aaKnown RBP-0.61□□□□□ -2.51
SMN2-208ENST00000508258 DNAH17Q9UFH2 4485 aa-0.62□□□□□ -2.51
SMN2-208ENST00000508258 ITPR1Q14643 2758 aa-0.62□□□□□ -2.51
SMN2-208ENST00000508258 ABRACLQ9P1F3 81 aa-0.62□□□□□ -2.51
SMN2-208ENST00000508258 LMO7Q8WWI1 1683 aa-0.62□□□□□ -2.51
SMN2-208ENST00000508258 TEX15Q9BXT5 2789 aa-0.62□□□□□ -2.51
SMN2-208ENST00000508258 HYDINQ4G0P3 5121 aa-0.63□□□□□ -2.51
SMN2-208ENST00000508258 PREX2Q70Z35 1606 aa-0.63□□□□□ -2.51
SMN2-208ENST00000508258 S100ZQ8WXG8 99 aa-0.63□□□□□ -2.51
SMN2-208ENST00000508258 PRXQ9BXM0 1461 aa-0.63□□□□□ -2.51
SMN2-208ENST00000508258 AGLP35573 1532 aa-0.64□□□□□ -2.51
SMN2-208ENST00000508258 USP9XQ93008 2570 aaPredicted RBP-0.64□□□□□ -2.51
SMN2-208ENST00000508258 SMIM27A0A1W2PRY6 76 aa-0.64□□□□□ -2.51
SMN2-208ENST00000508258 H0YGX0 51 aa-0.64□□□□□ -2.51
SMN2-208ENST00000508258 MT1XP80297 61 aa-0.64□□□□□ -2.51
SMN2-208ENST00000508258 SRCAPQ6ZRS2 3230 aa-0.65□□□□□ -2.51
SMN2-208ENST00000508258 SMIM31A0A1B0GVY4 71 aa-0.65□□□□□ -2.51
SMN2-208ENST00000508258 MT1EP04732 61 aa-0.65□□□□□ -2.51
SMN2-208ENST00000508258 SMIM5Q71RC9 77 aa-0.65□□□□□ -2.51
SMN2-208ENST00000508258 CSMD1Q96PZ7 3565 aa-0.66□□□□□ -2.51
SMN2-208ENST00000508258 WFDC10BQ8IUB3 73 aa-0.66□□□□□ -2.52
SMN2-208ENST00000508258 MGAQ8IWI9 3026 aa-0.67□□□□□ -2.52
SMN2-208ENST00000508258 COL6A5A8TX70 2615 aa-0.68□□□□□ -2.52
SMN2-208ENST00000508258 ABCA5Q8WWZ7 1642 aa-0.68□□□□□ -2.52
SMN2-208ENST00000508258 NRXN3Q9Y4C0 1643 aa-0.68□□□□□ -2.52
SMN2-208ENST00000508258 MROH2AA6NES4 1674 aa-0.69□□□□□ -2.52
SMN2-208ENST00000508258 SYCP2Q9BX26 1530 aa-0.69□□□□□ -2.52
SMN2-208ENST00000508258 NIPBLQ6KC79 2804 aaeCLIP-0.69□□□□□ -2.52
SMN2-208ENST00000508258 LINC01546A6NGU7 62 aa-0.69□□□□□ -2.52
SMN2-208ENST00000508258 ADCY10Q96PN6 1610 aa-0.69□□□□□ -2.52
SMN2-208ENST00000508258 ERICH3Q5RHP9 1530 aa-0.69□□□□□ -2.52
SMN2-208ENST00000508258 CHD7Q9P2D1 2997 aa-0.69□□□□□ -2.52
SMN2-208ENST00000508258 ADGRG4Q8IZF6 3080 aa-0.7□□□□□ -2.52
SMN2-208ENST00000508258 MT1LQ93083 61 aa-0.7□□□□□ -2.52
SMN2-208ENST00000508258 RYR2Q92736 4967 aa-0.71□□□□□ -2.52
SMN2-208ENST00000508258 PLNP26678 52 aa-0.71□□□□□ -2.52
SMN2-208ENST00000508258 NEBP20929 6669 aa-0.71□□□□□ -2.52
SMN2-208ENST00000508258 KIAA1109Q2LD37 5005 aa-0.72□□□□□ -2.52
SMN2-208ENST00000508258 SPART-AS1P0CW21 52 aa-0.72□□□□□ -2.52
SMN2-208ENST00000508258 EYSQ5T1H1 3165 aa-0.72□□□□□ -2.53
SMN2-208ENST00000508258 IQGAP1P46940 1657 aa-0.72□□□□□ -2.53
SMN2-208ENST00000508258 ABCC8Q09428 1581 aa-0.73□□□□□ -2.53
SMN2-208ENST00000508258 RYR3Q15413 4870 aa-0.73□□□□□ -2.53
SMN2-208ENST00000508258 DEFB131AP59861 70 aa-0.73□□□□□ -2.53
SMN2-208ENST00000508258 DNAH5Q8TE73 4624 aa-0.73□□□□□ -2.53
SMN2-208ENST00000508258 ZFHX4Q86UP3 3567 aa-0.73□□□□□ -2.53
SMN2-208ENST00000508258 LRBAP50851 2863 aa-0.74□□□□□ -2.53
SMN2-208ENST00000508258 TFF3Q07654 80 aa-0.74□□□□□ -2.53
SMN2-208ENST00000508258 TRRAPQ9Y4A5 3859 aa-0.75□□□□□ -2.53
SMN2-208ENST00000508258 SPTAN1Q13813 2472 aaKnown RBP-0.75□□□□□ -2.53
SMN2-208ENST00000508258 FANCD2Q9BXW9 1451 aa-0.75□□□□□ -2.53
SMN2-208ENST00000508258 DDX60Q8IY21 1712 aaKnown RBP-0.76□□□□□ -2.53
SMN2-208ENST00000508258 SMG1Q96Q15 3661 aaKnown RBP-0.77□□□□□ -2.53
SMN2-208ENST00000508258 DOPEY1Q5JWR5 2465 aa-0.77□□□□□ -2.53
SMN2-208ENST00000508258 NFAT5O94916 1531 aa-0.77□□□□□ -2.53
SMN2-208ENST00000508258 POLR2KP53803 58 aaKnown RBP-0.77□□□□□ -2.53
SMN2-208ENST00000508258 CMC2Q9NRP2 79 aa-0.77□□□□□ -2.53
SMN2-208ENST00000508258 MT1HL1P0DM35 61 aa-0.78□□□□□ -2.53
SMN2-208ENST00000508258 SMIM2Q9BVW6 85 aa-0.78□□□□□ -2.53
SMN2-208ENST00000508258 CSMD2Q7Z408 3487 aa-0.78□□□□□ -2.53
SMN2-208ENST00000508258 MYO9AB2RTY4 2548 aa-0.78□□□□□ -2.53
SMN2-208ENST00000508258 TRPM2O94759 1503 aa-0.79□□□□□ -2.54
SMN2-208ENST00000508258 MT1GP13640 62 aa-0.8□□□□□ -2.54
SMN2-208ENST00000508258 CFAP46Q8IYW2 2715 aa-0.8□□□□□ -2.54
SMN2-208ENST00000508258 CLTCL1P53675 1640 aa-0.8□□□□□ -2.54
SMN2-208ENST00000508258 LEAP2Q969E1 77 aa-0.82□□□□□ -2.54
SMN2-208ENST00000508258 CRYBG3Q68DQ2 2970 aa-0.83□□□□□ -2.54
SMN2-208ENST00000508258 MT1MQ8N339 61 aa-0.83□□□□□ -2.54
SMN2-208ENST00000508258 MT2AP02795 61 aa-0.84□□□□□ -2.54
SMN2-208ENST00000508258 CEP295Q9C0D2 2601 aa-0.84□□□□□ -2.54
SMN2-208ENST00000508258 DMXL2Q8TDJ6 3036 aa-0.85□□□□□ -2.55
SMN2-208ENST00000508258 MYO15AQ9UKN7 3530 aa-0.87□□□□□ -2.55
SMN2-208ENST00000508258 NDUFA1O15239 70 aa-0.87□□□□□ -2.55
SMN2-208ENST00000508258 DEFB4AO15263 64 aa-0.87□□□□□ -2.55
SMN2-208ENST00000508258 DEFB136Q30KP8 78 aa-0.88□□□□□ -2.55
SMN2-208ENST00000508258 VPS13CQ709C8 3753 aa-0.89□□□□□ -2.55
SMN2-208ENST00000508258 SNRPGP15A8MWD9 76 aa-0.91□□□□□ -2.56
SMN2-208ENST00000508258 ITPR2Q14571 2701 aa-0.91□□□□□ -2.56
SMN2-208ENST00000508258 PRUNE2Q8WUY3 3088 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms