RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
PDE6A-202ENST00000508173 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
PDE6A-202ENST00000508173 SRRM2Q9UQ35 2752 aaKnown RBP3.59□□□□□ -1.84
PDE6A-202ENST00000508173 FRAS1Q86XX4 4008 aa3.55□□□□□ -1.84
PDE6A-202ENST00000508173 DNAH1Q9P2D7 4330 aa3.53□□□□□ -1.84
PDE6A-202ENST00000508173 DNAH9Q9NYC9 4486 aa3.53□□□□□ -1.84
PDE6A-202ENST00000508173 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
PDE6A-202ENST00000508173 KRTAP12-3P60328 96 aa3.5□□□□□ -1.85
PDE6A-202ENST00000508173 ANK2Q01484 3957 aa3.49□□□□□ -1.85
PDE6A-202ENST00000508173 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
PDE6A-202ENST00000508173 LCE2DQ5TA82 110 aaPredicted RBP3.46□□□□□ -1.86
PDE6A-202ENST00000508173 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
PDE6A-202ENST00000508173 DNAH8Q96JB1 4490 aa3.45□□□□□ -1.86
PDE6A-202ENST00000508173 DNAH2Q9P225 4427 aa3.45□□□□□ -1.86
PDE6A-202ENST00000508173 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
PDE6A-202ENST00000508173 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
PDE6A-202ENST00000508173 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
PDE6A-202ENST00000508173 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
PDE6A-202ENST00000508173 CMYA5Q8N3K9 4069 aa3.4□□□□□ -1.86
PDE6A-202ENST00000508173 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
PDE6A-202ENST00000508173 LYSTQ99698 3801 aa3.38□□□□□ -1.87
PDE6A-202ENST00000508173 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
PDE6A-202ENST00000508173 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
PDE6A-202ENST00000508173 DNHD1Q96M86 4753 aa3.36□□□□□ -1.87
PDE6A-202ENST00000508173 DYNC2H1Q8NCM8 4307 aaKnown RBP3.36□□□□□ -1.87
PDE6A-202ENST00000508173 MT1HP80294 61 aa3.36□□□□□ -1.87
PDE6A-202ENST00000508173 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
PDE6A-202ENST00000508173 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
PDE6A-202ENST00000508173 DNAH6Q9C0G6 4158 aa3.32□□□□□ -1.88
PDE6A-202ENST00000508173 VPS13DQ5THJ4 4388 aa3.31□□□□□ -1.88
PDE6A-202ENST00000508173 KMT2AQ03164 3969 aa3.31□□□□□ -1.88
PDE6A-202ENST00000508173 DNAH5Q8TE73 4624 aa3.3□□□□□ -1.88
PDE6A-202ENST00000508173 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
PDE6A-202ENST00000508173 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
PDE6A-202ENST00000508173 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
PDE6A-202ENST00000508173 STARD9Q9P2P6 4700 aa3.28□□□□□ -1.88
PDE6A-202ENST00000508173 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
PDE6A-202ENST00000508173 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
PDE6A-202ENST00000508173 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
PDE6A-202ENST00000508173 SPRR2EP22531 72 aa3.25□□□□□ -1.89
PDE6A-202ENST00000508173 SPRR2BP35325 72 aa3.25□□□□□ -1.89
PDE6A-202ENST00000508173 SPRR2AP35326 72 aa3.25□□□□□ -1.89
PDE6A-202ENST00000508173 HECTD4Q9Y4D8 3996 aa3.24□□□□□ -1.89
PDE6A-202ENST00000508173 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
PDE6A-202ENST00000508173 SACSQ9NZJ4 4579 aa3.22□□□□□ -1.89
PDE6A-202ENST00000508173 PRKDCP78527 4128 aaKnown RBP3.21□□□□□ -1.9
PDE6A-202ENST00000508173 MT2AP02795 61 aa3.2□□□□□ -1.9
PDE6A-202ENST00000508173 SPRR2DP22532 72 aa3.18□□□□□ -1.9
PDE6A-202ENST00000508173 LRP1BQ9NZR2 4599 aa3.17□□□□□ -1.9
PDE6A-202ENST00000508173 RYR1P21817 5038 aa3.13□□□□□ -1.91
PDE6A-202ENST00000508173 HERC2O95714 4834 aa3.12□□□□□ -1.91
PDE6A-202ENST00000508173 HERC1Q15751 4861 aa3.11□□□□□ -1.91
PDE6A-202ENST00000508173 APOBP04114 4563 aaKnown RBP3.1□□□□□ -1.91
PDE6A-202ENST00000508173 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
PDE6A-202ENST00000508173 FAT1Q14517 4588 aa3.1□□□□□ -1.91
PDE6A-202ENST00000508173 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.91
PDE6A-202ENST00000508173 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
PDE6A-202ENST00000508173 LCE2CQ5TA81 110 aa3.09□□□□□ -1.91
PDE6A-202ENST00000508173 RYR2Q92736 4967 aa3.09□□□□□ -1.91
PDE6A-202ENST00000508173 RYR3Q15413 4870 aa3.09□□□□□ -1.91
PDE6A-202ENST00000508173 MT1FP04733 61 aa3.08□□□□□ -1.92
PDE6A-202ENST00000508173 LCE2BO14633 110 aa3.08□□□□□ -1.92
PDE6A-202ENST00000508173 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
PDE6A-202ENST00000508173 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
PDE6A-202ENST00000508173 KRTAP19-1Q8IUB9 90 aa3.05□□□□□ -1.92
PDE6A-202ENST00000508173 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
PDE6A-202ENST00000508173 PKHD1L1Q86WI1 4243 aa3.04□□□□□ -1.92
PDE6A-202ENST00000508173 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
PDE6A-202ENST00000508173 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
PDE6A-202ENST00000508173 FAT3Q8TDW7 4589 aa3.01□□□□□ -1.93
PDE6A-202ENST00000508173 HSPG2P98160 4391 aa3□□□□□ -1.93
PDE6A-202ENST00000508173 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
PDE6A-202ENST00000508173 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.93
PDE6A-202ENST00000508173 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
PDE6A-202ENST00000508173 KIAA1109Q2LD37 5005 aa2.93□□□□□ -1.94
PDE6A-202ENST00000508173 PKD1P98161 4303 aa2.92□□□□□ -1.94
PDE6A-202ENST00000508173 LPAP08519 4548 aa2.91□□□□□ -1.94
PDE6A-202ENST00000508173 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.94
PDE6A-202ENST00000508173 LCE3BQ5TA77 95 aa2.89□□□□□ -1.95
PDE6A-202ENST00000508173 TNXBP22105 4242 aa2.88□□□□□ -1.95
PDE6A-202ENST00000508173 KRTAP9-8Q9BYQ0 159 aa2.88□□□□□ -1.95
PDE6A-202ENST00000508173 HYDINQ4G0P3 5121 aa2.88□□□□□ -1.95
PDE6A-202ENST00000508173 LRP1Q07954 4544 aaKnown RBP2.88□□□□□ -1.95
PDE6A-202ENST00000508173 KRTAP2-3P0C7H8 128 aa2.87□□□□□ -1.95
PDE6A-202ENST00000508173 KRTAP2-4Q9BYR9 128 aa2.87□□□□□ -1.95
PDE6A-202ENST00000508173 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
PDE6A-202ENST00000508173 KRTAP9-3Q9BYQ3 159 aa2.84□□□□□ -1.95
PDE6A-202ENST00000508173 KMT2CQ8NEZ4 4911 aaKnown RBP2.84□□□□□ -1.95
PDE6A-202ENST00000508173 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.96
PDE6A-202ENST00000508173 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.96
PDE6A-202ENST00000508173 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.83□□□□□ -1.96
PDE6A-202ENST00000508173 MT1GP13640 62 aa2.83□□□□□ -1.96
PDE6A-202ENST00000508173 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
PDE6A-202ENST00000508173 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
PDE6A-202ENST00000508173 MT3P25713 68 aa2.79□□□□□ -1.96
PDE6A-202ENST00000508173 MT1BP07438 61 aa2.77□□□□□ -1.97
PDE6A-202ENST00000508173 MT1XP80297 61 aa2.76□□□□□ -1.97
PDE6A-202ENST00000508173 MT4P47944 62 aa2.75□□□□□ -1.97
PDE6A-202ENST00000508173 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
PDE6A-202ENST00000508173 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms