RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 KIF1AQ12756 1690 aa-0.73□□□□□ -2.53
SMN1-206ENST00000507905 DNAH3Q8TD57 4116 aa-0.74□□□□□ -2.53
SMN1-206ENST00000507905 ABCC6O95255 1503 aa-0.74□□□□□ -2.53
SMN1-206ENST00000507905 PKHD1L1Q86WI1 4243 aa-0.74□□□□□ -2.53
SMN1-206ENST00000507905 DEFB114Q30KQ6 69 aa-0.74□□□□□ -2.53
SMN1-206ENST00000507905 CEP250Q9BV73 2442 aa-0.74□□□□□ -2.53
SMN1-206ENST00000507905 VCANP13611 3396 aa-0.74□□□□□ -2.53
SMN1-206ENST00000507905 ANK3Q12955 4377 aaKnown RBP-0.75□□□□□ -2.53
SMN1-206ENST00000507905 TOGARAM1Q9Y4F4 1720 aa-0.75□□□□□ -2.53
SMN1-206ENST00000507905 C6orf48Q9UBA6 75 aa-0.75□□□□□ -2.53
SMN1-206ENST00000507905 MUC17Q685J3 4493 aa-0.76□□□□□ -2.53
SMN1-206ENST00000507905 SFTA3P0C7M3 94 aa-0.76□□□□□ -2.53
SMN1-206ENST00000507905 FCER1GP30273 86 aa-0.76□□□□□ -2.53
SMN1-206ENST00000507905 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.76□□□□□ -2.53
SMN1-206ENST00000507905 DNMBPQ6XZF7 1577 aa-0.76□□□□□ -2.53
SMN1-206ENST00000507905 C3P01024 1663 aa-0.76□□□□□ -2.53
SMN1-206ENST00000507905 VPS13DQ5THJ4 4388 aa-0.76□□□□□ -2.53
SMN1-206ENST00000507905 ATMQ13315 3056 aa-0.77□□□□□ -2.53
SMN1-206ENST00000507905 MT1BP07438 61 aa-0.78□□□□□ -2.53
SMN1-206ENST00000507905 LINC01549A6NIU2 74 aa-0.79□□□□□ -2.54
SMN1-206ENST00000507905 APOBP04114 4563 aaKnown RBP-0.79□□□□□ -2.54
SMN1-206ENST00000507905 CDH23Q9H251 3354 aa-0.79□□□□□ -2.54
SMN1-206ENST00000507905 PRUNE2Q8WUY3 3088 aa-0.8□□□□□ -2.54
SMN1-206ENST00000507905 DNAH5Q8TE73 4624 aa-0.8□□□□□ -2.54
SMN1-206ENST00000507905 RANBP2P49792 3224 aaKnown RBP-0.8□□□□□ -2.54
SMN1-206ENST00000507905 IGLV5-48A0A075B6I7 105 aa-0.8□□□□□ -2.54
SMN1-206ENST00000507905 USP34Q70CQ2 3546 aa-0.8□□□□□ -2.54
SMN1-206ENST00000507905 MT1HL1P0DM35 61 aa-0.81□□□□□ -2.54
SMN1-206ENST00000507905 WDFY3Q8IZQ1 3526 aa-0.81□□□□□ -2.54
SMN1-206ENST00000507905 DNAH14Q0VDD8 3507 aa-0.82□□□□□ -2.54
SMN1-206ENST00000507905 MROH1Q8NDA8 1641 aa-0.82□□□□□ -2.54
SMN1-206ENST00000507905 DNAH12Q6ZR08 3092 aa-0.83□□□□□ -2.54
SMN1-206ENST00000507905 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.83□□□□□ -2.54
SMN1-206ENST00000507905 H3BUA1 57 aa-0.83□□□□□ -2.54
SMN1-206ENST00000507905 SPENQ96T58 3664 aaKnown RBP-0.84□□□□□ -2.54
SMN1-206ENST00000507905 MADDQ8WXG6 1647 aa-0.84□□□□□ -2.54
SMN1-206ENST00000507905 DNAH2Q9P225 4427 aa-0.85□□□□□ -2.55
SMN1-206ENST00000507905 KRTAP8-1Q8IUC2 63 aa-0.85□□□□□ -2.55
SMN1-206ENST00000507905 DNAH11Q96DT5 4516 aa-0.86□□□□□ -2.55
SMN1-206ENST00000507905 VPS13CQ709C8 3753 aa-0.86□□□□□ -2.55
SMN1-206ENST00000507905 LY75O60449 1722 aa-0.86□□□□□ -2.55
SMN1-206ENST00000507905 TRRAPQ9Y4A5 3859 aa-0.87□□□□□ -2.55
SMN1-206ENST00000507905 MMP24-AS1A0A0U1RRL7 71 aa-0.87□□□□□ -2.55
SMN1-206ENST00000507905 UTRNP46939 3433 aa-0.88□□□□□ -2.55
SMN1-206ENST00000507905 SMR3BP02814 79 aaPredicted RBP-0.88□□□□□ -2.55
SMN1-206ENST00000507905 FRYLO94915 3013 aa-0.89□□□□□ -2.55
SMN1-206ENST00000507905 CLASP1Q7Z460 1538 aa-0.89□□□□□ -2.55
SMN1-206ENST00000507905 K7EMI3 77 aa-0.89□□□□□ -2.55
SMN1-206ENST00000507905 M0R1W7 72 aa-0.89□□□□□ -2.55
SMN1-206ENST00000507905 DNAH8Q96JB1 4490 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 TNP1P09430 55 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 KRTAP19-5Q3LI72 72 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 EFCAB5A4FU69 1503 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 VPS13AQ96RL7 3174 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 CMYA5Q8N3K9 4069 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 BRCA2P51587 3418 aa-0.9□□□□□ -2.55
SMN1-206ENST00000507905 CROCC2H7BZ55 1655 aa-0.91□□□□□ -2.55
SMN1-206ENST00000507905 CDC42BPAQ5VT25 1732 aa-0.91□□□□□ -2.55
SMN1-206ENST00000507905 NOP10Q9NPE3 64 aaKnown RBP-0.91□□□□□ -2.56
SMN1-206ENST00000507905 SMG1Q96Q15 3661 aaKnown RBP-0.91□□□□□ -2.56
SMN1-206ENST00000507905 CENPFP49454 3210 aa-0.91□□□□□ -2.56
SMN1-206ENST00000507905 DEFB1P60022 68 aa-0.93□□□□□ -2.56
SMN1-206ENST00000507905 ABCA6Q8N139 1617 aa-0.93□□□□□ -2.56
SMN1-206ENST00000507905 GOLGB1Q14789 3259 aaKnown RBP-0.93□□□□□ -2.56
SMN1-206ENST00000507905 DMDP11532 3685 aa-0.94□□□□□ -2.56
SMN1-206ENST00000507905 XIRP2A4UGR9 3374 aa-0.94□□□□□ -2.56
SMN1-206ENST00000507905 TIAM1Q13009 1591 aa-0.95□□□□□ -2.56
SMN1-206ENST00000507905 MT1HP80294 61 aa-0.95□□□□□ -2.56
SMN1-206ENST00000507905 ASPMQ8IZT6 3477 aa-0.95□□□□□ -2.56
SMN1-206ENST00000507905 A0A087WWC5 75 aa-0.96□□□□□ -2.56
SMN1-206ENST00000507905 CLPSL2Q6UWE3 100 aa-0.96□□□□□ -2.56
SMN1-206ENST00000507905 GLI2P10070 1586 aa-0.96□□□□□ -2.56
SMN1-206ENST00000507905 MT1FP04733 61 aa-0.97□□□□□ -2.56
SMN1-206ENST00000507905 NMES1Q9C002 83 aa-0.97□□□□□ -2.56
SMN1-206ENST00000507905 CCDC180Q9P1Z9 1646 aa-0.97□□□□□ -2.57
SMN1-206ENST00000507905 EEA1Q15075 1411 aa-0.98□□□□□ -2.57
SMN1-206ENST00000507905 MT2AP02795 61 aa-0.98□□□□□ -2.57
SMN1-206ENST00000507905 MT1MQ8N339 61 aa-0.98□□□□□ -2.57
SMN1-206ENST00000507905 DNAH10Q8IVF4 4471 aa-0.99□□□□□ -2.57
SMN1-206ENST00000507905 DNAH17Q9UFH2 4485 aa-0.99□□□□□ -2.57
SMN1-206ENST00000507905 SERF2P84101 59 aa-0.99□□□□□ -2.57
SMN1-206ENST00000507905 LINC00308Q8TCZ7 52 aa-0.99□□□□□ -2.57
SMN1-206ENST00000507905 MAST1Q9Y2H9 1570 aa-1□□□□□ -2.57
SMN1-206ENST00000507905 SPTBN5Q9NRC6 3674 aaKnown RBP-1□□□□□ -2.57
SMN1-206ENST00000507905 IGIPA6NJ69 53 aa-1□□□□□ -2.57
SMN1-206ENST00000507905 MT1GP13640 62 aa-1□□□□□ -2.57
SMN1-206ENST00000507905 ABRACLQ9P1F3 81 aa-1□□□□□ -2.57
SMN1-206ENST00000507905 KAAG1Q9UBP8 84 aa-1□□□□□ -2.57
SMN1-206ENST00000507905 TMEM167BQ9NRX6 74 aa-1.01□□□□□ -2.57
SMN1-206ENST00000507905 A0A1B0GUL6 1792 aa-1.02□□□□□ -2.57
SMN1-206ENST00000507905 M0QY20 66 aa-1.02□□□□□ -2.57
SMN1-206ENST00000507905 ALS2Q96Q42 1657 aa-1.03□□□□□ -2.57
SMN1-206ENST00000507905 MT1XP80297 61 aa-1.04□□□□□ -2.58
SMN1-206ENST00000507905 S100ZQ8WXG8 99 aa-1.04□□□□□ -2.58
SMN1-206ENST00000507905 UGGT1Q9NYU2 1555 aa-1.05□□□□□ -2.58
SMN1-206ENST00000507905 SMIM27A0A1W2PRY6 76 aa-1.06□□□□□ -2.58
SMN1-206ENST00000507905 M0QZ58 72 aa-1.07□□□□□ -2.58
SMN1-206ENST00000507905 WFDC10BQ8IUB3 73 aa-1.08□□□□□ -2.58
SMN1-206ENST00000507905 CPS1P31327 1500 aa-1.09□□□□□ -2.58
SMN1-206ENST00000507905 EFCAB6Q5THR3 1501 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms