RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 FLGP20930 4061 aaPredicted RBP0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 APOBP04114 4563 aaKnown RBP0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 M0QY20 66 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 DEFB135Q30KP9 77 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 CLPSL2Q6UWE3 100 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 DMXL2Q8TDJ6 3036 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 SACSQ9NZJ4 4579 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 SYNE1Q8NF91 8797 aaKnown RBP0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 DNAH8Q96JB1 4490 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 DNAH3Q8TD57 4116 aa0.11□□□□□ -2.39
AC008539.1-201ENST00000507653 LRP1Q07954 4544 aaKnown RBP0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 NBPF19A0A087WUL8 3843 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 PKD1P98161 4303 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 A0A096LNI7 61 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 DEFB108AA8MXU0 73 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 H0YGG7 62 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 H3BUA1 57 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 M0R2T5 61 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 STATHP02808 62 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 APELAP0DMC3 54 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 DEFB131AP59861 70 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 DEFB1P60022 68 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 PRCDQ00LT1 54 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 DEFB136Q30KP8 78 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 DEFB110Q30KQ9 67 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 RPL39P5Q59GN2 51 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 LINC01590Q5TEZ4 76 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 CUBNO60494 3623 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 PKHD1P08F94 4074 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 LPAP08519 4548 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 COL12A1Q99715 3063 aa0.1□□□□□ -2.39
AC008539.1-201ENST00000507653 RANBP2P49792 3224 aaKnown RBP0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 DNAH7Q8WXX0 4024 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 RELNP78509 3460 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 DNAH9Q9NYC9 4486 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 CMYA5Q8N3K9 4069 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 PKHD1L1Q86WI1 4243 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 LAMA5O15230 3695 aa0.09□□□□□ -2.39
AC008539.1-201ENST00000507653 C9orf92A6NGG3 77 aa0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 H3BNG1 76 aa0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 SPRR2DP22532 72 aa0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 CELSR3Q9NYQ7 3312 aa0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 HUWE1Q7Z6Z7 4374 aaKnown RBP0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 DNAH12Q6ZR08 3092 aa0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 FAT3Q8TDW7 4589 aa0.09□□□□□ -2.4
AC008539.1-201ENST00000507653 ADGRG4Q8IZF6 3080 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 VPS13DQ5THJ4 4388 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 LRP1BQ9NZR2 4599 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 K7EIM0 57 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 M0QZ58 72 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 MT1AP04731 61 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 HTN1P15515 57 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 SPRR2BP35325 72 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 TMEM167AQ8TBQ9 72 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 NOP10Q9NPE3 64 aaKnown RBP0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 SPENQ96T58 3664 aaKnown RBP0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 DNAH6Q9C0G6 4158 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 TRIOO75962 3097 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 ATMQ13315 3056 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 PRUNE2Q8WUY3 3088 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 CFAP54Q96N23 3096 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 ANK3Q12955 4377 aaKnown RBP0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 DNAH2Q9P225 4427 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 HECTD4Q9Y4D8 3996 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 DNAH1Q9P2D7 4330 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 FAT1Q14517 4588 aa0.08□□□□□ -2.4
AC008539.1-201ENST00000507653 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 SPTBN5Q9NRC6 3674 aaKnown RBP0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 FREM2Q5SZK8 3169 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 FRYLO94915 3013 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 BOD1L1Q8NFC6 3051 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 PCLOQ9Y6V0 5065 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 A0A096LPF7 62 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 TNP1P09430 55 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 SPART-AS1P0CW21 52 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 KRTAP8-1Q8IUC2 63 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 SPRR2GQ9BYE4 73 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 CEP350Q5VT06 3117 aa0.07□□□□□ -2.4
AC008539.1-201ENST00000507653 DYNC2H1Q8NCM8 4307 aaKnown RBP0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 SVEP1Q4LDE5 3571 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 CSMD1Q96PZ7 3565 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 LRP2P98164 4655 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 SMG1Q96Q15 3661 aaKnown RBP0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 LAMA2P24043 3122 aaKnown RBP0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 SMR3BP02814 79 aaPredicted RBP0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 SPRR2AP35326 72 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 PLECQ15149 4684 aaKnown RBP0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 DEFB108BQ8NET1 73 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 RHPN1-AS1Q9BWJ2 59 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 ZFHX4Q86UP3 3567 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 WDFY4Q6ZS81 3184 aa0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 DYNC1H1Q14204 4646 aaKnown RBP0.06□□□□□ -2.4
AC008539.1-201ENST00000507653 HERC1Q15751 4861 aa0.05□□□□□ -2.4
AC008539.1-201ENST00000507653 CENPFP49454 3210 aa0.05□□□□□ -2.4
AC008539.1-201ENST00000507653 DNAH10Q8IVF4 4471 aa0.05□□□□□ -2.4
AC008539.1-201ENST00000507653 VPS13CQ709C8 3753 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms