RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 CSMD2Q7Z408 3487 aa0.72□□□□□ -2.29
LINC01088-203ENST00000507476 TRPM2O94759 1503 aa0.71□□□□□ -2.3
LINC01088-203ENST00000507476 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
LINC01088-203ENST00000507476 ATMQ13315 3056 aa0.71□□□□□ -2.3
LINC01088-203ENST00000507476 FAT2Q9NYQ8 4349 aa0.7□□□□□ -2.3
LINC01088-203ENST00000507476 RNF213Q63HN8 5207 aa0.7□□□□□ -2.3
LINC01088-203ENST00000507476 MGAQ8IWI9 3026 aa0.7□□□□□ -2.3
LINC01088-203ENST00000507476 ADGRG4Q8IZF6 3080 aa0.7□□□□□ -2.3
LINC01088-203ENST00000507476 CLTCL1P53675 1640 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 C9orf92A6NGG3 77 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 CHD7Q9P2D1 2997 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 CUBNO60494 3623 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 TGP01266 2768 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 MTORP42345 2549 aa0.69□□□□□ -2.3
LINC01088-203ENST00000507476 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
LINC01088-203ENST00000507476 LAMA5O15230 3695 aa0.68□□□□□ -2.3
LINC01088-203ENST00000507476 HUWE1Q7Z6Z7 4374 aaKnown RBP0.68□□□□□ -2.3
LINC01088-203ENST00000507476 H3BNG1 76 aa0.68□□□□□ -2.3
LINC01088-203ENST00000507476 NDUFA1O15239 70 aa0.68□□□□□ -2.3
LINC01088-203ENST00000507476 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
LINC01088-203ENST00000507476 USP9YO00507 2555 aaPredicted RBP0.68□□□□□ -2.3
LINC01088-203ENST00000507476 NEBP20929 6669 aa0.68□□□□□ -2.3
LINC01088-203ENST00000507476 NIPBLQ6KC79 2804 aaeCLIP0.67□□□□□ -2.3
LINC01088-203ENST00000507476 SYNE2Q8WXH0 6885 aaKnown RBP0.67□□□□□ -2.3
LINC01088-203ENST00000507476 TLN2Q9Y4G6 2542 aa0.67□□□□□ -2.3
LINC01088-203ENST00000507476 FAM186AA6NE01 2351 aa0.67□□□□□ -2.3
LINC01088-203ENST00000507476 RIF1Q5UIP0 2472 aaKnown RBP0.66□□□□□ -2.3
LINC01088-203ENST00000507476 MXRA5Q9NR99 2828 aa0.66□□□□□ -2.3
LINC01088-203ENST00000507476 AKAP9Q99996 3911 aa0.66□□□□□ -2.3
LINC01088-203ENST00000507476 DCHS2Q6V1P9 2916 aa0.66□□□□□ -2.3
LINC01088-203ENST00000507476 IGLV5-48A0A075B6I7 105 aa0.66□□□□□ -2.3
LINC01088-203ENST00000507476 KRTAP20-1Q3LI63 56 aa0.66□□□□□ -2.3
LINC01088-203ENST00000507476 HIVEP3Q5T1R4 2406 aa0.66□□□□□ -2.3
LINC01088-203ENST00000507476 DEFB131AP59861 70 aa0.65□□□□□ -2.31
LINC01088-203ENST00000507476 NBASA2RRP1 2371 aa0.65□□□□□ -2.31
LINC01088-203ENST00000507476 SSPOA2VEC9 5147 aa0.65□□□□□ -2.31
LINC01088-203ENST00000507476 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
LINC01088-203ENST00000507476 DSTQ03001 7570 aaKnown RBP0.64□□□□□ -2.31
LINC01088-203ENST00000507476 MGAM2Q2M2H8 2515 aa0.64□□□□□ -2.31
LINC01088-203ENST00000507476 SPRR2DP22532 72 aa0.64□□□□□ -2.31
LINC01088-203ENST00000507476 SVEP1Q4LDE5 3571 aa0.64□□□□□ -2.31
LINC01088-203ENST00000507476 ACANP16112 2415 aa0.64□□□□□ -2.31
LINC01088-203ENST00000507476 LAMA1P25391 3075 aa0.63□□□□□ -2.31
LINC01088-203ENST00000507476 HIVEP1P15822 2718 aa0.63□□□□□ -2.31
LINC01088-203ENST00000507476 APC2O95996 2303 aa0.63□□□□□ -2.31
LINC01088-203ENST00000507476 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
LINC01088-203ENST00000507476 LRP1Q07954 4544 aaKnown RBP0.63□□□□□ -2.31
LINC01088-203ENST00000507476 VPS13CQ709C8 3753 aa0.63□□□□□ -2.31
LINC01088-203ENST00000507476 NSD1Q96L73 2696 aaPredicted RBP0.62□□□□□ -2.31
LINC01088-203ENST00000507476 MAP1AP78559 2803 aaPredicted RBP0.62□□□□□ -2.31
LINC01088-203ENST00000507476 SACSQ9NZJ4 4579 aa0.62□□□□□ -2.31
LINC01088-203ENST00000507476 M0QY20 66 aa0.62□□□□□ -2.31
LINC01088-203ENST00000507476 ITPR2Q14571 2701 aa0.62□□□□□ -2.31
LINC01088-203ENST00000507476 KMT2DO14686 5537 aa0.61□□□□□ -2.31
LINC01088-203ENST00000507476 MMP24-AS1A0A0U1RRL7 71 aa0.6□□□□□ -2.31
LINC01088-203ENST00000507476 KMT2AQ03164 3969 aa0.6□□□□□ -2.31
LINC01088-203ENST00000507476 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.31
LINC01088-203ENST00000507476 MYCBP2O75592 4640 aa0.59□□□□□ -2.31
LINC01088-203ENST00000507476 MDN1Q9NU22 5596 aa0.59□□□□□ -2.32
LINC01088-203ENST00000507476 DEFB124Q8NES8 71 aa0.58□□□□□ -2.32
LINC01088-203ENST00000507476 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
LINC01088-203ENST00000507476 SPRR2BP35325 72 aa0.57□□□□□ -2.32
LINC01088-203ENST00000507476 FAT3Q8TDW7 4589 aa0.57□□□□□ -2.32
LINC01088-203ENST00000507476 MUC12Q9UKN1 5478 aa0.57□□□□□ -2.32
LINC01088-203ENST00000507476 SONP18583 2426 aaKnown RBP0.57□□□□□ -2.32
LINC01088-203ENST00000507476 CENPEQ02224 2701 aa0.57□□□□□ -2.32
LINC01088-203ENST00000507476 DYNC2H1Q8NCM8 4307 aaKnown RBP0.57□□□□□ -2.32
LINC01088-203ENST00000507476 HRNRQ86YZ3 2850 aaPredicted RBP0.56□□□□□ -2.32
LINC01088-203ENST00000507476 DNAH1Q9P2D7 4330 aa0.56□□□□□ -2.32
LINC01088-203ENST00000507476 A8MTW9 85 aa0.56□□□□□ -2.32
LINC01088-203ENST00000507476 TACC2O95359 2948 aa0.56□□□□□ -2.32
LINC01088-203ENST00000507476 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
LINC01088-203ENST00000507476 STAB2Q8WWQ8 2551 aa0.55□□□□□ -2.32
LINC01088-203ENST00000507476 HECTD4Q9Y4D8 3996 aa0.55□□□□□ -2.32
LINC01088-203ENST00000507476 TRRAPQ9Y4A5 3859 aa0.55□□□□□ -2.32
LINC01088-203ENST00000507476 USH2AO75445 5202 aa0.54□□□□□ -2.32
LINC01088-203ENST00000507476 LPAP08519 4548 aa0.54□□□□□ -2.32
LINC01088-203ENST00000507476 LYSTQ99698 3801 aa0.54□□□□□ -2.32
LINC01088-203ENST00000507476 DMBT1Q9UGM3 2413 aaPredicted RBP0.54□□□□□ -2.32
LINC01088-203ENST00000507476 DEFB110Q30KQ9 67 aa0.53□□□□□ -2.32
LINC01088-203ENST00000507476 DYNC1H1Q14204 4646 aaKnown RBP0.53□□□□□ -2.33
LINC01088-203ENST00000507476 PLECQ15149 4684 aaKnown RBP0.53□□□□□ -2.33
LINC01088-203ENST00000507476 CMYA5Q8N3K9 4069 aa0.53□□□□□ -2.33
LINC01088-203ENST00000507476 DNAH9Q9NYC9 4486 aa0.52□□□□□ -2.33
LINC01088-203ENST00000507476 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
LINC01088-203ENST00000507476 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
LINC01088-203ENST00000507476 LRP2P98164 4655 aa0.52□□□□□ -2.33
LINC01088-203ENST00000507476 HSPG2P98160 4391 aa0.51□□□□□ -2.33
LINC01088-203ENST00000507476 M0QZ58 72 aa0.51□□□□□ -2.33
LINC01088-203ENST00000507476 TNP1P09430 55 aa0.51□□□□□ -2.33
LINC01088-203ENST00000507476 LRP1BQ9NZR2 4599 aa0.51□□□□□ -2.33
LINC01088-203ENST00000507476 FAT1Q14517 4588 aa0.5□□□□□ -2.33
LINC01088-203ENST00000507476 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
LINC01088-203ENST00000507476 DUOX1Q9NRD9 1551 aa0.49□□□□□ -2.33
LINC01088-203ENST00000507476 STARD9Q9P2P6 4700 aa0.49□□□□□ -2.33
LINC01088-203ENST00000507476 DNAH7Q8WXX0 4024 aa0.48□□□□□ -2.33
LINC01088-203ENST00000507476 VPS13BQ7Z7G8 4022 aa0.48□□□□□ -2.33
LINC01088-203ENST00000507476 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
LINC01088-203ENST00000507476 PKD1P98161 4303 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms