RNA–Protein interactions for RNA: ENST00000506214.1

TMA16-203, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2

Gene TMA16, Length 843 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-203ENST00000506214 CHD8Q9HCK8 2581 aa2.56□□□□□ -2
TMA16-203ENST00000506214 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
TMA16-203ENST00000506214 PIEZO1Q92508 2521 aa2.56□□□□□ -2
TMA16-203ENST00000506214 KRTAP12-1P59990 96 aa2.56□□□□□ -2
TMA16-203ENST00000506214 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
TMA16-203ENST00000506214 DNAH3Q8TD57 4116 aa2.55□□□□□ -2
TMA16-203ENST00000506214 PKD1L1Q8TDX9 2849 aa2.55□□□□□ -2
TMA16-203ENST00000506214 HUWE1Q7Z6Z7 4374 aaKnown RBP2.55□□□□□ -2
TMA16-203ENST00000506214 ANK2Q01484 3957 aa2.55□□□□□ -2
TMA16-203ENST00000506214 POLQO75417 2590 aa2.55□□□□□ -2
TMA16-203ENST00000506214 SETD2Q9BYW2 2564 aaPredicted RBP2.55□□□□□ -2
TMA16-203ENST00000506214 FLG2Q5D862 2391 aaPredicted RBP2.54□□□□□ -2
TMA16-203ENST00000506214 VWFP04275 2813 aa2.54□□□□□ -2
TMA16-203ENST00000506214 TENM3Q9P273 2699 aa2.54□□□□□ -2
TMA16-203ENST00000506214 A0A0D9SG42 100 aa2.54□□□□□ -2
TMA16-203ENST00000506214 HECTD1Q9ULT8 2610 aa2.54□□□□□ -2
TMA16-203ENST00000506214 FRAS1Q86XX4 4008 aa2.53□□□□□ -2
TMA16-203ENST00000506214 CCDC168Q8NDH2 2452 aa2.52□□□□□ -2.01
TMA16-203ENST00000506214 ZNF469Q96JG9 3925 aaPredicted RBP2.52□□□□□ -2.01
TMA16-203ENST00000506214 MTORP42345 2549 aa2.52□□□□□ -2.01
TMA16-203ENST00000506214 SONP18583 2426 aaKnown RBP2.51□□□□□ -2.01
TMA16-203ENST00000506214 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
TMA16-203ENST00000506214 PKD1L2Q7Z442 2459 aa2.5□□□□□ -2.01
TMA16-203ENST00000506214 SACSQ9NZJ4 4579 aa2.5□□□□□ -2.01
TMA16-203ENST00000506214 PRKDCP78527 4128 aaKnown RBP2.49□□□□□ -2.01
TMA16-203ENST00000506214 FLNCQ14315 2725 aa2.49□□□□□ -2.01
TMA16-203ENST00000506214 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
TMA16-203ENST00000506214 FLNAP21333 2647 aaKnown RBP2.49□□□□□ -2.01
TMA16-203ENST00000506214 HELZ2Q9BYK8 2649 aaKnown RBP2.49□□□□□ -2.01
TMA16-203ENST00000506214 LYSTQ99698 3801 aa2.49□□□□□ -2.01
TMA16-203ENST00000506214 MEGF8Q7Z7M0 2845 aa2.48□□□□□ -2.01
TMA16-203ENST00000506214 DNAH2Q9P225 4427 aa2.48□□□□□ -2.01
TMA16-203ENST00000506214 BAHCC1Q9P281 2608 aa2.48□□□□□ -2.01
TMA16-203ENST00000506214 CSMD3Q7Z407 3707 aa2.47□□□□□ -2.01
TMA16-203ENST00000506214 IGSF10Q6WRI0 2623 aa2.46□□□□□ -2.02
TMA16-203ENST00000506214 C9orf92A6NGG3 77 aa2.46□□□□□ -2.02
TMA16-203ENST00000506214 CENPEQ02224 2701 aa2.46□□□□□ -2.02
TMA16-203ENST00000506214 ACACBO00763 2458 aa2.45□□□□□ -2.02
TMA16-203ENST00000506214 M0QZ58 72 aa2.45□□□□□ -2.02
TMA16-203ENST00000506214 TENM1Q9UKZ4 2725 aa2.45□□□□□ -2.02
TMA16-203ENST00000506214 J3QKU1 62 aa2.44□□□□□ -2.02
TMA16-203ENST00000506214 DNAH7Q8WXX0 4024 aa2.43□□□□□ -2.02
TMA16-203ENST00000506214 CMYA5Q8N3K9 4069 aa2.43□□□□□ -2.02
TMA16-203ENST00000506214 ABCA12Q86UK0 2595 aa2.43□□□□□ -2.02
TMA16-203ENST00000506214 DNAH6Q9C0G6 4158 aa2.42□□□□□ -2.02
TMA16-203ENST00000506214 MYCBP2O75592 4640 aa2.42□□□□□ -2.02
TMA16-203ENST00000506214 MAST4O15021 2626 aa2.41□□□□□ -2.02
TMA16-203ENST00000506214 TGP01266 2768 aa2.4□□□□□ -2.02
TMA16-203ENST00000506214 ACANP16112 2415 aa2.4□□□□□ -2.02
TMA16-203ENST00000506214 TEP1Q99973 2627 aaKnown RBP2.4□□□□□ -2.03
TMA16-203ENST00000506214 PLECQ15149 4684 aaKnown RBP2.39□□□□□ -2.03
TMA16-203ENST00000506214 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
TMA16-203ENST00000506214 FBN3Q75N90 2809 aa2.39□□□□□ -2.03
TMA16-203ENST00000506214 COL7A1Q02388 2944 aa2.38□□□□□ -2.03
TMA16-203ENST00000506214 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
TMA16-203ENST00000506214 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
TMA16-203ENST00000506214 FAM208BQ5VWN6 2430 aa2.38□□□□□ -2.03
TMA16-203ENST00000506214 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
TMA16-203ENST00000506214 NBEAL1Q6ZS30 2694 aa2.37□□□□□ -2.03
TMA16-203ENST00000506214 HECTD4Q9Y4D8 3996 aa2.36□□□□□ -2.03
TMA16-203ENST00000506214 COL6A5A8TX70 2615 aa2.36□□□□□ -2.03
TMA16-203ENST00000506214 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
TMA16-203ENST00000506214 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.03
TMA16-203ENST00000506214 STAB2Q8WWQ8 2551 aa2.34□□□□□ -2.04
TMA16-203ENST00000506214 CACNA1AO00555 2505 aa2.33□□□□□ -2.04
TMA16-203ENST00000506214 MYO18BQ8IUG5 2567 aa2.33□□□□□ -2.04
TMA16-203ENST00000506214 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
TMA16-203ENST00000506214 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
TMA16-203ENST00000506214 R4GN34 69 aa2.32□□□□□ -2.04
TMA16-203ENST00000506214 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
TMA16-203ENST00000506214 ITPR2Q14571 2701 aa2.32□□□□□ -2.04
TMA16-203ENST00000506214 KMT2AQ03164 3969 aa2.32□□□□□ -2.04
TMA16-203ENST00000506214 ATRQ13535 2644 aa2.31□□□□□ -2.04
TMA16-203ENST00000506214 NSD1Q96L73 2696 aaPredicted RBP2.31□□□□□ -2.04
TMA16-203ENST00000506214 LRP1Q07954 4544 aaKnown RBP2.31□□□□□ -2.04
TMA16-203ENST00000506214 STARD9Q9P2P6 4700 aa2.3□□□□□ -2.04
TMA16-203ENST00000506214 USP24Q9UPU5 2620 aa2.3□□□□□ -2.04
TMA16-203ENST00000506214 FASNP49327 2511 aaKnown RBP2.3□□□□□ -2.04
TMA16-203ENST00000506214 INE1O15225 51 aa2.29□□□□□ -2.04
TMA16-203ENST00000506214 PKD1P98161 4303 aa2.28□□□□□ -2.04
TMA16-203ENST00000506214 NOTCH1P46531 2555 aa2.28□□□□□ -2.04
TMA16-203ENST00000506214 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
TMA16-203ENST00000506214 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
TMA16-203ENST00000506214 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
TMA16-203ENST00000506214 PKHD1P08F94 4074 aa2.24□□□□□ -2.05
TMA16-203ENST00000506214 FAT2Q9NYQ8 4349 aa2.23□□□□□ -2.05
TMA16-203ENST00000506214 TNXBP22105 4242 aa2.23□□□□□ -2.05
TMA16-203ENST00000506214 HSPG2P98160 4391 aa2.22□□□□□ -2.05
TMA16-203ENST00000506214 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
TMA16-203ENST00000506214 FAT1Q14517 4588 aa2.2□□□□□ -2.06
TMA16-203ENST00000506214 DMBT1Q9UGM3 2413 aaPredicted RBP2.19□□□□□ -2.06
TMA16-203ENST00000506214 KRTAP6-3Q3LI67 103 aa2.18□□□□□ -2.06
TMA16-203ENST00000506214 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
TMA16-203ENST00000506214 Q5VSD8 79 aa2.17□□□□□ -2.06
TMA16-203ENST00000506214 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
TMA16-203ENST00000506214 TNP1P09430 55 aa2.15□□□□□ -2.07
TMA16-203ENST00000506214 STAB1Q9NY15 2570 aa2.14□□□□□ -2.07
TMA16-203ENST00000506214 KRTAP21-3Q3LHN1 58 aa2.12□□□□□ -2.07
TMA16-203ENST00000506214 KRTAP19-2Q3LHN2 52 aa2.11□□□□□ -2.07
TMA16-203ENST00000506214 HYDINQ4G0P3 5121 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms