RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 FLNCQ14315 2725 aa2.31□□□□□ -2.04
CHD1-204ENST00000505982 ROMO1P60602 79 aa2.31□□□□□ -2.04
CHD1-204ENST00000505982 H0YAA0 97 aa2.29□□□□□ -2.04
CHD1-204ENST00000505982 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
CHD1-204ENST00000505982 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
CHD1-204ENST00000505982 PDZD2O15018 2839 aa2.27□□□□□ -2.05
CHD1-204ENST00000505982 NF1P21359 2839 aa2.27□□□□□ -2.05
CHD1-204ENST00000505982 USP24Q9UPU5 2620 aa2.27□□□□□ -2.05
CHD1-204ENST00000505982 Q6ZSA8 131 aa2.27□□□□□ -2.05
CHD1-204ENST00000505982 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
CHD1-204ENST00000505982 CSMD2Q7Z408 3487 aa2.26□□□□□ -2.05
CHD1-204ENST00000505982 TENM3Q9P273 2699 aa2.25□□□□□ -2.05
CHD1-204ENST00000505982 NIPBLQ6KC79 2804 aaeCLIP2.25□□□□□ -2.05
CHD1-204ENST00000505982 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
CHD1-204ENST00000505982 AKAP9Q99996 3911 aa2.24□□□□□ -2.05
CHD1-204ENST00000505982 ALMS1Q8TCU4 4167 aa2.24□□□□□ -2.05
CHD1-204ENST00000505982 CENPEQ02224 2701 aa2.24□□□□□ -2.05
CHD1-204ENST00000505982 ANK3Q12955 4377 aaKnown RBP2.23□□□□□ -2.05
CHD1-204ENST00000505982 VWFP04275 2813 aa2.23□□□□□ -2.05
CHD1-204ENST00000505982 CRIPTQ9P021 101 aa2.22□□□□□ -2.05
CHD1-204ENST00000505982 ATRQ13535 2644 aa2.21□□□□□ -2.05
CHD1-204ENST00000505982 HECTD1Q9ULT8 2610 aa2.21□□□□□ -2.05
CHD1-204ENST00000505982 PKD1L1Q8TDX9 2849 aa2.21□□□□□ -2.06
CHD1-204ENST00000505982 NSD1Q96L73 2696 aaPredicted RBP2.21□□□□□ -2.06
CHD1-204ENST00000505982 RPL37P61927 97 aaKnown RBP2.2□□□□□ -2.06
CHD1-204ENST00000505982 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
CHD1-204ENST00000505982 COX6B2Q6YFQ2 88 aa2.2□□□□□ -2.06
CHD1-204ENST00000505982 HELZ2Q9BYK8 2649 aaKnown RBP2.2□□□□□ -2.06
CHD1-204ENST00000505982 CUBNO60494 3623 aa2.19□□□□□ -2.06
CHD1-204ENST00000505982 ITPR2Q14571 2701 aa2.19□□□□□ -2.06
CHD1-204ENST00000505982 TENM1Q9UKZ4 2725 aa2.19□□□□□ -2.06
CHD1-204ENST00000505982 OTOGQ6ZRI0 2925 aa2.18□□□□□ -2.06
CHD1-204ENST00000505982 TENM4Q6N022 2769 aa2.18□□□□□ -2.06
CHD1-204ENST00000505982 C9orf92A6NGG3 77 aa2.18□□□□□ -2.06
CHD1-204ENST00000505982 A0A0D9SG42 100 aa2.17□□□□□ -2.06
CHD1-204ENST00000505982 NBPF19A0A087WUL8 3843 aa2.17□□□□□ -2.06
CHD1-204ENST00000505982 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
CHD1-204ENST00000505982 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
CHD1-204ENST00000505982 ZNF469Q96JG9 3925 aaPredicted RBP2.15□□□□□ -2.07
CHD1-204ENST00000505982 SRRM2Q9UQ35 2752 aaKnown RBP2.15□□□□□ -2.07
CHD1-204ENST00000505982 DNAH1Q9P2D7 4330 aa2.14□□□□□ -2.07
CHD1-204ENST00000505982 S4R3F8 94 aa2.13□□□□□ -2.07
CHD1-204ENST00000505982 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
CHD1-204ENST00000505982 NBEAL1Q6ZS30 2694 aa2.11□□□□□ -2.07
CHD1-204ENST00000505982 TGP01266 2768 aa2.09□□□□□ -2.07
CHD1-204ENST00000505982 STAB2Q8WWQ8 2551 aa2.08□□□□□ -2.08
CHD1-204ENST00000505982 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
CHD1-204ENST00000505982 STAB1Q9NY15 2570 aa2.07□□□□□ -2.08
CHD1-204ENST00000505982 ANK2Q01484 3957 aa2.07□□□□□ -2.08
CHD1-204ENST00000505982 FLG2Q5D862 2391 aaPredicted RBP2.06□□□□□ -2.08
CHD1-204ENST00000505982 HUWE1Q7Z6Z7 4374 aaKnown RBP2.06□□□□□ -2.08
CHD1-204ENST00000505982 COL6A5A8TX70 2615 aa2.06□□□□□ -2.08
CHD1-204ENST00000505982 MGAM2Q2M2H8 2515 aa2.06□□□□□ -2.08
CHD1-204ENST00000505982 MEGF8Q7Z7M0 2845 aa2.05□□□□□ -2.08
CHD1-204ENST00000505982 DNAH3Q8TD57 4116 aa2.05□□□□□ -2.08
CHD1-204ENST00000505982 M0QZ58 72 aa2.05□□□□□ -2.08
CHD1-204ENST00000505982 TRRAPQ9Y4A5 3859 aa2.05□□□□□ -2.08
CHD1-204ENST00000505982 SMR3BP02814 79 aaPredicted RBP2.03□□□□□ -2.08
CHD1-204ENST00000505982 DNHD1Q96M86 4753 aa2.03□□□□□ -2.08
CHD1-204ENST00000505982 DNAH10Q8IVF4 4471 aa2.03□□□□□ -2.08
CHD1-204ENST00000505982 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.09
CHD1-204ENST00000505982 COL7A1Q02388 2944 aa2.02□□□□□ -2.09
CHD1-204ENST00000505982 DNAH8Q96JB1 4490 aa2□□□□□ -2.09
CHD1-204ENST00000505982 PLAC4Q8WY50 150 aa2□□□□□ -2.09
CHD1-204ENST00000505982 VPS13DQ5THJ4 4388 aa1.99□□□□□ -2.09
CHD1-204ENST00000505982 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
CHD1-204ENST00000505982 DYNC2H1Q8NCM8 4307 aaKnown RBP1.98□□□□□ -2.09
CHD1-204ENST00000505982 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
CHD1-204ENST00000505982 CMYA5Q8N3K9 4069 aa1.97□□□□□ -2.09
CHD1-204ENST00000505982 KRTAP10-4P60372 401 aaPredicted RBP1.97□□□□□ -2.09
CHD1-204ENST00000505982 PRKDCP78527 4128 aaKnown RBP1.97□□□□□ -2.09
CHD1-204ENST00000505982 FRAS1Q86XX4 4008 aa1.96□□□□□ -2.1
CHD1-204ENST00000505982 CSMD3Q7Z407 3707 aa1.96□□□□□ -2.1
CHD1-204ENST00000505982 DMBT1Q9UGM3 2413 aaPredicted RBP1.94□□□□□ -2.1
CHD1-204ENST00000505982 DNAH11Q96DT5 4516 aa1.92□□□□□ -2.1
CHD1-204ENST00000505982 LYSTQ99698 3801 aa1.91□□□□□ -2.1
CHD1-204ENST00000505982 Q5VSD8 79 aa1.91□□□□□ -2.1
CHD1-204ENST00000505982 DNAH6Q9C0G6 4158 aa1.91□□□□□ -2.1
CHD1-204ENST00000505982 DNAH7Q8WXX0 4024 aa1.91□□□□□ -2.1
CHD1-204ENST00000505982 INE1O15225 51 aa1.9□□□□□ -2.11
CHD1-204ENST00000505982 STARD9Q9P2P6 4700 aa1.89□□□□□ -2.11
CHD1-204ENST00000505982 HECTD4Q9Y4D8 3996 aa1.89□□□□□ -2.11
CHD1-204ENST00000505982 PLECQ15149 4684 aaKnown RBP1.87□□□□□ -2.11
CHD1-204ENST00000505982 DNAH2Q9P225 4427 aa1.86□□□□□ -2.11
CHD1-204ENST00000505982 SACSQ9NZJ4 4579 aa1.84□□□□□ -2.11
CHD1-204ENST00000505982 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
CHD1-204ENST00000505982 TNP1P09430 55 aa1.84□□□□□ -2.11
CHD1-204ENST00000505982 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
CHD1-204ENST00000505982 KMT2AQ03164 3969 aa1.82□□□□□ -2.12
CHD1-204ENST00000505982 PCLOQ9Y6V0 5065 aa1.82□□□□□ -2.12
CHD1-204ENST00000505982 PKHD1P08F94 4074 aa1.82□□□□□ -2.12
CHD1-204ENST00000505982 RYR3Q15413 4870 aa1.82□□□□□ -2.12
CHD1-204ENST00000505982 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
CHD1-204ENST00000505982 PKD1P98161 4303 aa1.81□□□□□ -2.12
CHD1-204ENST00000505982 MT1HL1P0DM35 61 aa1.81□□□□□ -2.12
CHD1-204ENST00000505982 DNAH5Q8TE73 4624 aa1.81□□□□□ -2.12
CHD1-204ENST00000505982 VPS13BQ7Z7G8 4022 aa1.79□□□□□ -2.12
CHD1-204ENST00000505982 LRP1BQ9NZR2 4599 aa1.79□□□□□ -2.12
CHD1-204ENST00000505982 KMT2CQ8NEZ4 4911 aaKnown RBP1.76□□□□□ -2.13
CHD1-204ENST00000505982 HYDINQ4G0P3 5121 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms