RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 DEFB106AQ8N104 65 aa2.83□□□□□ -1.96
CDH9-202ENST00000505020 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
CDH9-202ENST00000505020 PRLHP81277 87 aa2.82□□□□□ -1.96
CDH9-202ENST00000505020 SVEP1Q4LDE5 3571 aa2.81□□□□□ -1.96
CDH9-202ENST00000505020 STATHP02808 62 aa2.81□□□□□ -1.96
CDH9-202ENST00000505020 KRTAP13-1Q8IUC0 172 aa2.81□□□□□ -1.96
CDH9-202ENST00000505020 HRNRQ86YZ3 2850 aaPredicted RBP2.8□□□□□ -1.96
CDH9-202ENST00000505020 PRKDCP78527 4128 aaKnown RBP2.8□□□□□ -1.96
CDH9-202ENST00000505020 TRRAPQ9Y4A5 3859 aa2.8□□□□□ -1.96
CDH9-202ENST00000505020 KRTAP4-3Q9BYR4 195 aa2.79□□□□□ -1.96
CDH9-202ENST00000505020 A8MTW9 85 aa2.78□□□□□ -1.96
CDH9-202ENST00000505020 S4R3F8 94 aa2.78□□□□□ -1.96
CDH9-202ENST00000505020 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.96
CDH9-202ENST00000505020 TENM1Q9UKZ4 2725 aa2.77□□□□□ -1.97
CDH9-202ENST00000505020 DEFB108AA8MXU0 73 aa2.76□□□□□ -1.97
CDH9-202ENST00000505020 DEFB110Q30KQ9 67 aa2.76□□□□□ -1.97
CDH9-202ENST00000505020 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
CDH9-202ENST00000505020 A0A0D9SG42 100 aa2.75□□□□□ -1.97
CDH9-202ENST00000505020 CLPSL2Q6UWE3 100 aa2.75□□□□□ -1.97
CDH9-202ENST00000505020 TOMM7Q9P0U1 55 aa2.75□□□□□ -1.97
CDH9-202ENST00000505020 DEFB104AQ8WTQ1 72 aa2.74□□□□□ -1.97
CDH9-202ENST00000505020 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
CDH9-202ENST00000505020 VWFP04275 2813 aa2.74□□□□□ -1.97
CDH9-202ENST00000505020 RYR2Q92736 4967 aa2.72□□□□□ -1.97
CDH9-202ENST00000505020 HERC2O95714 4834 aa2.72□□□□□ -1.97
CDH9-202ENST00000505020 HYDINQ4G0P3 5121 aa2.71□□□□□ -1.98
CDH9-202ENST00000505020 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
CDH9-202ENST00000505020 CMYA5Q8N3K9 4069 aa2.71□□□□□ -1.98
CDH9-202ENST00000505020 TENM3Q9P273 2699 aa2.7□□□□□ -1.98
CDH9-202ENST00000505020 RYR1P21817 5038 aa2.68□□□□□ -1.98
CDH9-202ENST00000505020 DYNC2H1Q8NCM8 4307 aaKnown RBP2.68□□□□□ -1.98
CDH9-202ENST00000505020 H0YGG7 62 aa2.68□□□□□ -1.98
CDH9-202ENST00000505020 DNAH1Q9P2D7 4330 aa2.65□□□□□ -1.98
CDH9-202ENST00000505020 TENM2Q9NT68 2774 aa2.65□□□□□ -1.99
CDH9-202ENST00000505020 SACSQ9NZJ4 4579 aa2.64□□□□□ -1.99
CDH9-202ENST00000505020 SPINK1P00995 79 aa2.63□□□□□ -1.99
CDH9-202ENST00000505020 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
CDH9-202ENST00000505020 TMEM167AQ8TBQ9 72 aa2.61□□□□□ -1.99
CDH9-202ENST00000505020 NOP10Q9NPE3 64 aaKnown RBP2.59□□□□□ -1.99
CDH9-202ENST00000505020 COL7A1Q02388 2944 aa2.59□□□□□ -2
CDH9-202ENST00000505020 K7EIM0 57 aa2.58□□□□□ -2
CDH9-202ENST00000505020 DNAH3Q8TD57 4116 aa2.58□□□□□ -2
CDH9-202ENST00000505020 DNAH9Q9NYC9 4486 aa2.58□□□□□ -2
CDH9-202ENST00000505020 STAB2Q8WWQ8 2551 aa2.57□□□□□ -2
CDH9-202ENST00000505020 LYSTQ99698 3801 aa2.57□□□□□ -2
CDH9-202ENST00000505020 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
CDH9-202ENST00000505020 RPL39P5Q59GN2 51 aa2.54□□□□□ -2
CDH9-202ENST00000505020 DNAH7Q8WXX0 4024 aa2.53□□□□□ -2
CDH9-202ENST00000505020 KIAA1109Q2LD37 5005 aa2.53□□□□□ -2
CDH9-202ENST00000505020 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
CDH9-202ENST00000505020 HECTD4Q9Y4D8 3996 aa2.53□□□□□ -2.01
CDH9-202ENST00000505020 DEFB108BQ8NET1 73 aa2.52□□□□□ -2.01
CDH9-202ENST00000505020 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
CDH9-202ENST00000505020 PLECQ15149 4684 aaKnown RBP2.5□□□□□ -2.01
CDH9-202ENST00000505020 HERC1Q15751 4861 aa2.48□□□□□ -2.01
CDH9-202ENST00000505020 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
CDH9-202ENST00000505020 FRAS1Q86XX4 4008 aa2.46□□□□□ -2.02
CDH9-202ENST00000505020 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
CDH9-202ENST00000505020 DNAH10Q8IVF4 4471 aa2.46□□□□□ -2.02
CDH9-202ENST00000505020 CSMD3Q7Z407 3707 aa2.46□□□□□ -2.02
CDH9-202ENST00000505020 HUWE1Q7Z6Z7 4374 aaKnown RBP2.45□□□□□ -2.02
CDH9-202ENST00000505020 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
CDH9-202ENST00000505020 DNAH11Q96DT5 4516 aa2.41□□□□□ -2.02
CDH9-202ENST00000505020 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
CDH9-202ENST00000505020 DMBT1Q9UGM3 2413 aaPredicted RBP2.4□□□□□ -2.02
CDH9-202ENST00000505020 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
CDH9-202ENST00000505020 H3BUX3 64 aa2.38□□□□□ -2.03
CDH9-202ENST00000505020 HSPG2P98160 4391 aa2.36□□□□□ -2.03
CDH9-202ENST00000505020 DNAH17Q9UFH2 4485 aa2.36□□□□□ -2.03
CDH9-202ENST00000505020 SRRM2Q9UQ35 2752 aaKnown RBP2.36□□□□□ -2.03
CDH9-202ENST00000505020 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
CDH9-202ENST00000505020 DNAH6Q9C0G6 4158 aa2.33□□□□□ -2.04
CDH9-202ENST00000505020 FAT2Q9NYQ8 4349 aa2.32□□□□□ -2.04
CDH9-202ENST00000505020 APOBP04114 4563 aaKnown RBP2.32□□□□□ -2.04
CDH9-202ENST00000505020 MYCBP2O75592 4640 aa2.32□□□□□ -2.04
CDH9-202ENST00000505020 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
CDH9-202ENST00000505020 HMCN2Q8NDA2 5059 aa2.31□□□□□ -2.04
CDH9-202ENST00000505020 DNAH2Q9P225 4427 aa2.31□□□□□ -2.04
CDH9-202ENST00000505020 M0QZ58 72 aa2.3□□□□□ -2.04
CDH9-202ENST00000505020 DNAH5Q8TE73 4624 aa2.29□□□□□ -2.04
CDH9-202ENST00000505020 PKD1P98161 4303 aa2.29□□□□□ -2.04
CDH9-202ENST00000505020 LRP1BQ9NZR2 4599 aa2.29□□□□□ -2.04
CDH9-202ENST00000505020 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
CDH9-202ENST00000505020 DEFB136Q30KP8 78 aa2.27□□□□□ -2.05
CDH9-202ENST00000505020 DEFB135Q30KP9 77 aa2.26□□□□□ -2.05
CDH9-202ENST00000505020 VPS13BQ7Z7G8 4022 aa2.25□□□□□ -2.05
CDH9-202ENST00000505020 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
CDH9-202ENST00000505020 FAT1Q14517 4588 aa2.22□□□□□ -2.05
CDH9-202ENST00000505020 APELAP0DMC3 54 aa2.21□□□□□ -2.05
CDH9-202ENST00000505020 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
CDH9-202ENST00000505020 MUC2Q02817 5179 aa2.19□□□□□ -2.06
CDH9-202ENST00000505020 CRCT1Q9UGL9 99 aa2.17□□□□□ -2.06
CDH9-202ENST00000505020 LRP2P98164 4655 aa2.17□□□□□ -2.06
CDH9-202ENST00000505020 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.06
CDH9-202ENST00000505020 SMR3BP02814 79 aaPredicted RBP2.15□□□□□ -2.06
CDH9-202ENST00000505020 M0R2T5 61 aa2.14□□□□□ -2.07
CDH9-202ENST00000505020 DEFB1P60022 68 aa2.14□□□□□ -2.07
CDH9-202ENST00000505020 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
CDH9-202ENST00000505020 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
CDH9-202ENST00000505020 DEFB4AO15263 64 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms