RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 A0A0C4DFX4 3053 aa-0.32□□□□□ -2.46
UBE2D3-218ENST00000505009 CROCC2H7BZ55 1655 aa-0.32□□□□□ -2.46
UBE2D3-218ENST00000505009 M0QY20 66 aa-0.32□□□□□ -2.46
UBE2D3-218ENST00000505009 TMEM167BQ9NRX6 74 aa-0.32□□□□□ -2.46
UBE2D3-218ENST00000505009 EFCAB5A4FU69 1503 aa-0.33□□□□□ -2.46
UBE2D3-218ENST00000505009 TEX15Q9BXT5 2789 aa-0.33□□□□□ -2.46
UBE2D3-218ENST00000505009 CCDC180Q9P1Z9 1646 aa-0.33□□□□□ -2.46
UBE2D3-218ENST00000505009 M0R1W7 72 aa-0.33□□□□□ -2.46
UBE2D3-218ENST00000505009 KRTAP19-6Q3LI70 58 aa-0.33□□□□□ -2.46
UBE2D3-218ENST00000505009 TRIOO75962 3097 aa-0.34□□□□□ -2.46
UBE2D3-218ENST00000505009 DYNC1H1Q14204 4646 aaKnown RBP-0.34□□□□□ -2.46
UBE2D3-218ENST00000505009 MT1HP80294 61 aa-0.34□□□□□ -2.46
UBE2D3-218ENST00000505009 FRYQ5TBA9 3013 aa-0.34□□□□□ -2.46
UBE2D3-218ENST00000505009 ALS2Q96Q42 1657 aa-0.34□□□□□ -2.46
UBE2D3-218ENST00000505009 RANBP2P49792 3224 aaKnown RBP-0.34□□□□□ -2.46
UBE2D3-218ENST00000505009 ABCA6Q8N139 1617 aa-0.35□□□□□ -2.46
UBE2D3-218ENST00000505009 GLI2P10070 1586 aa-0.35□□□□□ -2.47
UBE2D3-218ENST00000505009 CEP295Q9C0D2 2601 aa-0.35□□□□□ -2.47
UBE2D3-218ENST00000505009 S100ZQ8WXG8 99 aa-0.35□□□□□ -2.47
UBE2D3-218ENST00000505009 DNAH8Q96JB1 4490 aa-0.35□□□□□ -2.47
UBE2D3-218ENST00000505009 DNAH2Q9P225 4427 aa-0.35□□□□□ -2.47
UBE2D3-218ENST00000505009 NIPBLQ6KC79 2804 aaeCLIP-0.35□□□□□ -2.47
UBE2D3-218ENST00000505009 MUC3AQ02505 3323 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 EEA1Q15075 1411 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 SMIM27A0A1W2PRY6 76 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 A8MTW9 85 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 M0QZ58 72 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 CFAP46Q8IYW2 2715 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 PREX2Q70Z35 1606 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 MAST1Q9Y2H9 1570 aa-0.36□□□□□ -2.47
UBE2D3-218ENST00000505009 FAM208AQ9UK61 1670 aaKnown RBP-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 CMYA5Q8N3K9 4069 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 SPEGQ15772 3267 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 A0A087WWC5 75 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 KRTAP19-5Q3LI72 72 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 LINC00308Q8TCZ7 52 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 KAAG1Q9UBP8 84 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 C5orf42Q9H799 3197 aa-0.37□□□□□ -2.47
UBE2D3-218ENST00000505009 SPTAN1Q13813 2472 aaKnown RBP-0.38□□□□□ -2.47
UBE2D3-218ENST00000505009 ABCA10Q8WWZ4 1543 aa-0.38□□□□□ -2.47
UBE2D3-218ENST00000505009 SPENQ96T58 3664 aaKnown RBP-0.38□□□□□ -2.47
UBE2D3-218ENST00000505009 SRCAPQ6ZRS2 3230 aa-0.38□□□□□ -2.47
UBE2D3-218ENST00000505009 SMIM5Q71RC9 77 aa-0.38□□□□□ -2.47
UBE2D3-218ENST00000505009 ITPR2Q14571 2701 aa-0.38□□□□□ -2.47
UBE2D3-218ENST00000505009 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 UGGT1Q9NYU2 1555 aa-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 RELNP78509 3460 aa-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 LINC01546A6NGU7 62 aa-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 H0YGX0 51 aa-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 KRTAP8-1Q8IUC2 63 aa-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 PLECQ15149 4684 aaKnown RBP-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 EFCAB6Q5THR3 1501 aa-0.39□□□□□ -2.47
UBE2D3-218ENST00000505009 LRBAP50851 2863 aa-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 SMR3BP02814 79 aaPredicted RBP-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 SPART-AS1P0CW21 52 aa-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 WFDC10BQ8IUB3 73 aa-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 CPS1P31327 1500 aa-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 MYO9AB2RTY4 2548 aa-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 MKI67P46013 3256 aaKnown RBP-0.4□□□□□ -2.47
UBE2D3-218ENST00000505009 EYSQ5T1H1 3165 aa-0.41□□□□□ -2.47
UBE2D3-218ENST00000505009 TLN1Q9Y490 2541 aaKnown RBP-0.41□□□□□ -2.47
UBE2D3-218ENST00000505009 SPTBN5Q9NRC6 3674 aaKnown RBP-0.41□□□□□ -2.47
UBE2D3-218ENST00000505009 IGIPA6NJ69 53 aa-0.41□□□□□ -2.48
UBE2D3-218ENST00000505009 CSMD2Q7Z408 3487 aa-0.41□□□□□ -2.48
UBE2D3-218ENST00000505009 TRRAPQ9Y4A5 3859 aa-0.42□□□□□ -2.48
UBE2D3-218ENST00000505009 KIF21BO75037 1637 aa-0.42□□□□□ -2.48
UBE2D3-218ENST00000505009 PLNP26678 52 aa-0.43□□□□□ -2.48
UBE2D3-218ENST00000505009 MT1XP80297 61 aa-0.43□□□□□ -2.48
UBE2D3-218ENST00000505009 LMO7Q8WWI1 1683 aa-0.43□□□□□ -2.48
UBE2D3-218ENST00000505009 ABCA5Q8WWZ7 1642 aa-0.44□□□□□ -2.48
UBE2D3-218ENST00000505009 DEFB131AP59861 70 aa-0.44□□□□□ -2.48
UBE2D3-218ENST00000505009 PRXQ9BXM0 1461 aa-0.44□□□□□ -2.48
UBE2D3-218ENST00000505009 LOC400499M0QZD8 3231 aa-0.44□□□□□ -2.48
UBE2D3-218ENST00000505009 ADGRG4Q8IZF6 3080 aa-0.45□□□□□ -2.48
UBE2D3-218ENST00000505009 SMIM31A0A1B0GVY4 71 aa-0.45□□□□□ -2.48
UBE2D3-218ENST00000505009 MT1EP04732 61 aa-0.45□□□□□ -2.48
UBE2D3-218ENST00000505009 MROH2AA6NES4 1674 aa-0.46□□□□□ -2.48
UBE2D3-218ENST00000505009 CHD7Q9P2D1 2997 aa-0.46□□□□□ -2.48
UBE2D3-218ENST00000505009 MGAQ8IWI9 3026 aa-0.46□□□□□ -2.48
UBE2D3-218ENST00000505009 FREM2Q5SZK8 3169 aa-0.46□□□□□ -2.48
UBE2D3-218ENST00000505009 PCNTO95613 3336 aa-0.46□□□□□ -2.48
UBE2D3-218ENST00000505009 CEP350Q5VT06 3117 aa-0.47□□□□□ -2.48
UBE2D3-218ENST00000505009 CFAP47Q6ZTR5 3102 aa-0.47□□□□□ -2.48
UBE2D3-218ENST00000505009 AGLP35573 1532 aa-0.47□□□□□ -2.48
UBE2D3-218ENST00000505009 MT1LQ93083 61 aa-0.47□□□□□ -2.48
UBE2D3-218ENST00000505009 DMXL2Q8TDJ6 3036 aa-0.47□□□□□ -2.49
UBE2D3-218ENST00000505009 SYCP2Q9BX26 1530 aa-0.48□□□□□ -2.49
UBE2D3-218ENST00000505009 CFAP54Q96N23 3096 aa-0.48□□□□□ -2.49
UBE2D3-218ENST00000505009 POLR2KP53803 58 aaKnown RBP-0.48□□□□□ -2.49
UBE2D3-218ENST00000505009 VCANP13611 3396 aa-0.48□□□□□ -2.49
UBE2D3-218ENST00000505009 DNAH5Q8TE73 4624 aa-0.49□□□□□ -2.49
UBE2D3-218ENST00000505009 ADCY10Q96PN6 1610 aa-0.49□□□□□ -2.49
UBE2D3-218ENST00000505009 DNAH17Q9UFH2 4485 aa-0.49□□□□□ -2.49
UBE2D3-218ENST00000505009 DDX60Q8IY21 1712 aaKnown RBP-0.49□□□□□ -2.49
UBE2D3-218ENST00000505009 MT1HL1P0DM35 61 aa-0.49□□□□□ -2.49
UBE2D3-218ENST00000505009 SZT2Q5T011 3432 aa-0.5□□□□□ -2.49
UBE2D3-218ENST00000505009 SMIM2Q9BVW6 85 aa-0.5□□□□□ -2.49
UBE2D3-218ENST00000505009 ABCC8Q09428 1581 aa-0.5□□□□□ -2.49
UBE2D3-218ENST00000505009 DNAH10Q8IVF4 4471 aa-0.51□□□□□ -2.49
UBE2D3-218ENST00000505009 TFF3Q07654 80 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms