RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 SACSQ9NZJ4 4579 aa0.91□□□□□ -2.26
ATXN3-208ENST00000504047 DNAH6Q9C0G6 4158 aa0.9□□□□□ -2.26
ATXN3-208ENST00000504047 UNC79Q9P2D8 2635 aa0.9□□□□□ -2.26
ATXN3-208ENST00000504047 FLG2Q5D862 2391 aaPredicted RBP0.9□□□□□ -2.27
ATXN3-208ENST00000504047 NAV2Q8IVL1 2488 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 USP9YO00507 2555 aaPredicted RBP0.9□□□□□ -2.27
ATXN3-208ENST00000504047 Q6ZRN7 208 aaPredicted RBP0.9□□□□□ -2.27
ATXN3-208ENST00000504047 DNAH7Q8WXX0 4024 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 ZNF462Q96JM2 2506 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 ZNF292O60281 2723 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 HIVEP1P15822 2718 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 NIPBLQ6KC79 2804 aaeCLIP0.9□□□□□ -2.27
ATXN3-208ENST00000504047 CSMD3Q7Z407 3707 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 TTC28Q96AY4 2481 aa0.9□□□□□ -2.27
ATXN3-208ENST00000504047 MTORP42345 2549 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 FBN3Q75N90 2809 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 MYCBP2O75592 4640 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 A0A0D9SG42 100 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 UBE2DNLQ8IWF7 75 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 PLAC4Q8WY50 150 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 LYSTQ99698 3801 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 APLNQ9ULZ1 77 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 PLECQ15149 4684 aaKnown RBP0.89□□□□□ -2.27
ATXN3-208ENST00000504047 LRRK2Q5S007 2527 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 SONP18583 2426 aaKnown RBP0.89□□□□□ -2.27
ATXN3-208ENST00000504047 CHD8Q9HCK8 2581 aa0.89□□□□□ -2.27
ATXN3-208ENST00000504047 BDP1A6H8Y1 2624 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 PIEZO1Q92508 2521 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 ZNF469Q96JG9 3925 aaPredicted RBP0.88□□□□□ -2.27
ATXN3-208ENST00000504047 CMYA5Q8N3K9 4069 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 UBR5O95071 2799 aaPredicted RBP0.88□□□□□ -2.27
ATXN3-208ENST00000504047 SRRM2Q9UQ35 2752 aaKnown RBP0.88□□□□□ -2.27
ATXN3-208ENST00000504047 PKD1L2Q7Z442 2459 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 RPS29P62273 56 aaKnown RBP0.88□□□□□ -2.27
ATXN3-208ENST00000504047 CFAP46Q8IYW2 2715 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 DNAH5Q8TE73 4624 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 TENM4Q6N022 2769 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
ATXN3-208ENST00000504047 CCDC168Q8NDH2 2452 aa0.87□□□□□ -2.27
ATXN3-208ENST00000504047 PRO2289Q9P1D8 64 aa0.87□□□□□ -2.27
ATXN3-208ENST00000504047 APOBP04114 4563 aaKnown RBP0.87□□□□□ -2.27
ATXN3-208ENST00000504047 HECTD4Q9Y4D8 3996 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 ITPR3Q14573 2671 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 MEGF8Q7Z7M0 2845 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 POLQO75417 2590 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 ABCA12Q86UK0 2595 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
ATXN3-208ENST00000504047 CENPEQ02224 2701 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 HECTD1Q9ULT8 2610 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 ZFHX2Q9C0A1 2572 aaPredicted RBP0.86□□□□□ -2.27
ATXN3-208ENST00000504047 ACACBO00763 2458 aa0.86□□□□□ -2.27
ATXN3-208ENST00000504047 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 VWFP04275 2813 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 DYNC1H1Q14204 4646 aaKnown RBP0.85□□□□□ -2.27
ATXN3-208ENST00000504047 TENM1Q9UKZ4 2725 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 M0QZ58 72 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 SMR3AQ99954 134 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 HELZ2Q9BYK8 2649 aaKnown RBP0.85□□□□□ -2.27
ATXN3-208ENST00000504047 LRP1BQ9NZR2 4599 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 PKD1L1Q8TDX9 2849 aa0.85□□□□□ -2.27
ATXN3-208ENST00000504047 FLNAP21333 2647 aaKnown RBP0.85□□□□□ -2.27
ATXN3-208ENST00000504047 STARD9Q9P2P6 4700 aa0.84□□□□□ -2.27
ATXN3-208ENST00000504047 PDZD2O15018 2839 aa0.84□□□□□ -2.27
ATXN3-208ENST00000504047 ACANP16112 2415 aa0.84□□□□□ -2.27
ATXN3-208ENST00000504047 TGP01266 2768 aa0.84□□□□□ -2.27
ATXN3-208ENST00000504047 INE1O15225 51 aa0.84□□□□□ -2.27
ATXN3-208ENST00000504047 COL7A1Q02388 2944 aa0.83□□□□□ -2.28
ATXN3-208ENST00000504047 STAB2Q8WWQ8 2551 aa0.83□□□□□ -2.28
ATXN3-208ENST00000504047 LRP1Q07954 4544 aaKnown RBP0.83□□□□□ -2.28
ATXN3-208ENST00000504047 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
ATXN3-208ENST00000504047 FAM208BQ5VWN6 2430 aa0.83□□□□□ -2.28
ATXN3-208ENST00000504047 FAT2Q9NYQ8 4349 aa0.83□□□□□ -2.28
ATXN3-208ENST00000504047 KMT2AQ03164 3969 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 FLNCQ14315 2725 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 FASNP49327 2511 aaKnown RBP0.82□□□□□ -2.28
ATXN3-208ENST00000504047 TNXBP22105 4242 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 HSPG2P98160 4391 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 VPS13BQ7Z7G8 4022 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 PKHD1P08F94 4074 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 FAT3Q8TDW7 4589 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 MAST4O15021 2626 aa0.82□□□□□ -2.28
ATXN3-208ENST00000504047 MYO18BQ8IUG5 2567 aa0.81□□□□□ -2.28
ATXN3-208ENST00000504047 COL6A5A8TX70 2615 aa0.81□□□□□ -2.28
ATXN3-208ENST00000504047 NBEAL1Q6ZS30 2694 aa0.81□□□□□ -2.28
ATXN3-208ENST00000504047 CACNA1AO00555 2505 aa0.81□□□□□ -2.28
ATXN3-208ENST00000504047 TEP1Q99973 2627 aaKnown RBP0.81□□□□□ -2.28
ATXN3-208ENST00000504047 PKD1P98161 4303 aa0.8□□□□□ -2.28
ATXN3-208ENST00000504047 FAT1Q14517 4588 aa0.8□□□□□ -2.28
ATXN3-208ENST00000504047 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
ATXN3-208ENST00000504047 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
ATXN3-208ENST00000504047 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
ATXN3-208ENST00000504047 FLNBO75369 2602 aaKnown RBP0.79□□□□□ -2.28
ATXN3-208ENST00000504047 Q5VSD8 79 aa0.79□□□□□ -2.28
ATXN3-208ENST00000504047 DMBT1Q9UGM3 2413 aaPredicted RBP0.79□□□□□ -2.28
ATXN3-208ENST00000504047 HERC1Q15751 4861 aa0.79□□□□□ -2.28
ATXN3-208ENST00000504047 ATRQ13535 2644 aa0.79□□□□□ -2.28
ATXN3-208ENST00000504047 NSD1Q96L73 2696 aaPredicted RBP0.79□□□□□ -2.28
ATXN3-208ENST00000504047 USP24Q9UPU5 2620 aa0.78□□□□□ -2.28
ATXN3-208ENST00000504047 DNHD1Q96M86 4753 aa0.77□□□□□ -2.29
ATXN3-208ENST00000504047 MGAM2Q2M2H8 2515 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms