RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 HERC1Q15751 4861 aa2.39□□□□□ -2.03
CPNE4-203ENST00000503204 SORL1Q92673 2214 aa2.38□□□□□ -2.03
CPNE4-203ENST00000503204 DYNC2H1Q8NCM8 4307 aaKnown RBP2.38□□□□□ -2.03
CPNE4-203ENST00000503204 SPINK13Q1W4C9 94 aa2.38□□□□□ -2.03
CPNE4-203ENST00000503204 CLPSL2Q6UWE3 100 aa2.38□□□□□ -2.03
CPNE4-203ENST00000503204 DNAH1Q9P2D7 4330 aa2.38□□□□□ -2.03
CPNE4-203ENST00000503204 PLCE1Q9P212 2302 aa2.37□□□□□ -2.03
CPNE4-203ENST00000503204 HIVEP2P31629 2446 aa2.37□□□□□ -2.03
CPNE4-203ENST00000503204 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
CPNE4-203ENST00000503204 SONP18583 2426 aaKnown RBP2.37□□□□□ -2.03
CPNE4-203ENST00000503204 TENM3Q9P273 2699 aa2.36□□□□□ -2.03
CPNE4-203ENST00000503204 COL7A1Q02388 2944 aa2.36□□□□□ -2.03
CPNE4-203ENST00000503204 CRIPTQ9P021 101 aa2.36□□□□□ -2.03
CPNE4-203ENST00000503204 CSMD3Q7Z407 3707 aa2.36□□□□□ -2.03
CPNE4-203ENST00000503204 SPRR1BP22528 89 aa2.35□□□□□ -2.03
CPNE4-203ENST00000503204 TENM2Q9NT68 2774 aa2.34□□□□□ -2.03
CPNE4-203ENST00000503204 AKAP6Q13023 2319 aa2.34□□□□□ -2.03
CPNE4-203ENST00000503204 DEFB105AQ8NG35 78 aa2.33□□□□□ -2.04
CPNE4-203ENST00000503204 PLAC4Q8WY50 150 aa2.33□□□□□ -2.04
CPNE4-203ENST00000503204 KIAA1109Q2LD37 5005 aa2.33□□□□□ -2.04
CPNE4-203ENST00000503204 FRAS1Q86XX4 4008 aa2.32□□□□□ -2.04
CPNE4-203ENST00000503204 INE1O15225 51 aa2.32□□□□□ -2.04
CPNE4-203ENST00000503204 UNQ6190/PRO20217Q6UXQ8 127 aa2.32□□□□□ -2.04
CPNE4-203ENST00000503204 LYSTQ99698 3801 aa2.32□□□□□ -2.04
CPNE4-203ENST00000503204 H0YAA0 97 aa2.31□□□□□ -2.04
CPNE4-203ENST00000503204 DEFB1P60022 68 aa2.31□□□□□ -2.04
CPNE4-203ENST00000503204 C10orf99Q6UWK7 81 aa2.31□□□□□ -2.04
CPNE4-203ENST00000503204 G3V318 75 aa2.3□□□□□ -2.04
CPNE4-203ENST00000503204 Q6ZSA8 131 aa2.3□□□□□ -2.04
CPNE4-203ENST00000503204 ABCA1O95477 2261 aa2.29□□□□□ -2.04
CPNE4-203ENST00000503204 HTN1P15515 57 aa2.29□□□□□ -2.04
CPNE4-203ENST00000503204 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
CPNE4-203ENST00000503204 DNAH9Q9NYC9 4486 aa2.29□□□□□ -2.04
CPNE4-203ENST00000503204 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
CPNE4-203ENST00000503204 Q6ZRN7 208 aaPredicted RBP2.28□□□□□ -2.04
CPNE4-203ENST00000503204 PRO0255Q9UI72 69 aa2.28□□□□□ -2.04
CPNE4-203ENST00000503204 HECTD4Q9Y4D8 3996 aa2.27□□□□□ -2.05
CPNE4-203ENST00000503204 WNK2Q9Y3S1 2297 aa2.26□□□□□ -2.05
CPNE4-203ENST00000503204 DNAH3Q8TD57 4116 aa2.25□□□□□ -2.05
CPNE4-203ENST00000503204 LELP1Q5T871 98 aa2.25□□□□□ -2.05
CPNE4-203ENST00000503204 NOP10Q9NPE3 64 aaKnown RBP2.24□□□□□ -2.05
CPNE4-203ENST00000503204 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
CPNE4-203ENST00000503204 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CPNE4-203ENST00000503204 K7EIL1 84 aa2.22□□□□□ -2.05
CPNE4-203ENST00000503204 LYNX1P0DP58 116 aa2.21□□□□□ -2.06
CPNE4-203ENST00000503204 DEFB130BP0DP73 79 aa2.21□□□□□ -2.06
CPNE4-203ENST00000503204 DEFB130AP0DP74 79 aa2.21□□□□□ -2.06
CPNE4-203ENST00000503204 STARD9Q9P2P6 4700 aa2.2□□□□□ -2.06
CPNE4-203ENST00000503204 RNF213Q63HN8 5207 aa2.2□□□□□ -2.06
CPNE4-203ENST00000503204 STAB2Q8WWQ8 2551 aa2.19□□□□□ -2.06
CPNE4-203ENST00000503204 H3BNG1 76 aa2.19□□□□□ -2.06
CPNE4-203ENST00000503204 UBE2DNLQ8IWF7 75 aa2.19□□□□□ -2.06
CPNE4-203ENST00000503204 PLECQ15149 4684 aaKnown RBP2.19□□□□□ -2.06
CPNE4-203ENST00000503204 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
CPNE4-203ENST00000503204 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
CPNE4-203ENST00000503204 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
CPNE4-203ENST00000503204 BRD3OSQ6XYD6 125 aa2.18□□□□□ -2.06
CPNE4-203ENST00000503204 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
CPNE4-203ENST00000503204 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
CPNE4-203ENST00000503204 ROS1P08922 2347 aa2.16□□□□□ -2.06
CPNE4-203ENST00000503204 HSPG2P98160 4391 aa2.15□□□□□ -2.06
CPNE4-203ENST00000503204 HUWE1Q7Z6Z7 4374 aaKnown RBP2.15□□□□□ -2.07
CPNE4-203ENST00000503204 PKHD1P08F94 4074 aa2.15□□□□□ -2.07
CPNE4-203ENST00000503204 MUC2Q02817 5179 aa2.14□□□□□ -2.07
CPNE4-203ENST00000503204 PRLHP81277 87 aa2.14□□□□□ -2.07
CPNE4-203ENST00000503204 HMCN2Q8NDA2 5059 aa2.14□□□□□ -2.07
CPNE4-203ENST00000503204 DYNC1H1Q14204 4646 aaKnown RBP2.13□□□□□ -2.07
CPNE4-203ENST00000503204 LINC01556Q5JQF7 62 aa2.11□□□□□ -2.07
CPNE4-203ENST00000503204 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
CPNE4-203ENST00000503204 DEFB136Q30KP8 78 aa2.1□□□□□ -2.07
CPNE4-203ENST00000503204 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
CPNE4-203ENST00000503204 VPS13DQ5THJ4 4388 aa2.1□□□□□ -2.07
CPNE4-203ENST00000503204 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
CPNE4-203ENST00000503204 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
CPNE4-203ENST00000503204 MYCBP2O75592 4640 aa2.09□□□□□ -2.07
CPNE4-203ENST00000503204 S4R3F8 94 aa2.08□□□□□ -2.08
CPNE4-203ENST00000503204 FSIP2Q5CZC0 6907 aa2.07□□□□□ -2.08
CPNE4-203ENST00000503204 A0A096LPF7 62 aa2.07□□□□□ -2.08
CPNE4-203ENST00000503204 SPART-AS1P0CW21 52 aa2.07□□□□□ -2.08
CPNE4-203ENST00000503204 KRTAP13-1Q8IUC0 172 aa2.07□□□□□ -2.08
CPNE4-203ENST00000503204 PKD1P98161 4303 aa2.06□□□□□ -2.08
CPNE4-203ENST00000503204 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
CPNE4-203ENST00000503204 SPINK1P00995 79 aa2.06□□□□□ -2.08
CPNE4-203ENST00000503204 FAT4Q6V0I7 4981 aa2.06□□□□□ -2.08
CPNE4-203ENST00000503204 APOBP04114 4563 aaKnown RBP2.05□□□□□ -2.08
CPNE4-203ENST00000503204 DMBT1Q9UGM3 2413 aaPredicted RBP2.03□□□□□ -2.08
CPNE4-203ENST00000503204 M0QZ58 72 aa2.03□□□□□ -2.08
CPNE4-203ENST00000503204 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
CPNE4-203ENST00000503204 Q5VSD8 79 aa2.03□□□□□ -2.08
CPNE4-203ENST00000503204 FLG2Q5D862 2391 aaPredicted RBP2.02□□□□□ -2.09
CPNE4-203ENST00000503204 DNAH17Q9UFH2 4485 aa2.02□□□□□ -2.09
CPNE4-203ENST00000503204 APLNQ9ULZ1 77 aa2.02□□□□□ -2.09
CPNE4-203ENST00000503204 LRP1BQ9NZR2 4599 aa2.01□□□□□ -2.09
CPNE4-203ENST00000503204 DNAH6Q9C0G6 4158 aa2□□□□□ -2.09
CPNE4-203ENST00000503204 KRTAP12-1P59990 96 aa2□□□□□ -2.09
CPNE4-203ENST00000503204 FAT1Q14517 4588 aa2□□□□□ -2.09
CPNE4-203ENST00000503204 LRP2P98164 4655 aa1.98□□□□□ -2.09
CPNE4-203ENST00000503204 DNAH5Q8TE73 4624 aa1.97□□□□□ -2.09
CPNE4-203ENST00000503204 A0A096LNI7 61 aa1.97□□□□□ -2.09
CPNE4-203ENST00000503204 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms