RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 COA5Q86WW8 74 aa2.99□□□□□ -1.93
RFC1-204ENST00000502706 LINC00846Q9NV44 126 aa2.99□□□□□ -1.93
RFC1-204ENST00000502706 ENHOQ6UWT2 76 aa2.98□□□□□ -1.93
RFC1-204ENST00000502706 OBSCN-AS1Q96MR7 158 aa2.98□□□□□ -1.93
RFC1-204ENST00000502706 C22orf24Q9Y442 160 aa2.98□□□□□ -1.93
RFC1-204ENST00000502706 TRBV10-1A0A0K0K1A3 114 aa2.97□□□□□ -1.93
RFC1-204ENST00000502706 CLPSL2Q6UWE3 100 aa2.97□□□□□ -1.93
RFC1-204ENST00000502706 TRBV6-5A0A0K0K1A5 114 aa2.96□□□□□ -1.94
RFC1-204ENST00000502706 UBL5Q9BZL1 73 aa2.96□□□□□ -1.94
RFC1-204ENST00000502706 SNURFQ9Y675 71 aa2.96□□□□□ -1.94
RFC1-204ENST00000502706 H0YGX0 51 aa2.95□□□□□ -1.94
RFC1-204ENST00000502706 RPL39LQ96EH5 51 aaKnown RBP2.95□□□□□ -1.94
RFC1-204ENST00000502706 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
RFC1-204ENST00000502706 PLAC8Q9NZF1 115 aa2.95□□□□□ -1.94
RFC1-204ENST00000502706 LPAP08519 4548 aa2.94□□□□□ -1.94
RFC1-204ENST00000502706 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
RFC1-204ENST00000502706 MGPP08493 103 aa2.94□□□□□ -1.94
RFC1-204ENST00000502706 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
RFC1-204ENST00000502706 LINC00308Q8TCZ7 52 aa2.94□□□□□ -1.94
RFC1-204ENST00000502706 NDUFA1O15239 70 aa2.93□□□□□ -1.94
RFC1-204ENST00000502706 RPL39P62891 51 aaKnown RBP2.93□□□□□ -1.94
RFC1-204ENST00000502706 SPINK6Q6UWN8 80 aa2.93□□□□□ -1.94
RFC1-204ENST00000502706 TRBV7-4A0A0J9YYF1 115 aa2.92□□□□□ -1.94
RFC1-204ENST00000502706 IGKV4-1P06312 121 aa2.92□□□□□ -1.94
RFC1-204ENST00000502706 COX6A2Q02221 97 aa2.92□□□□□ -1.94
RFC1-204ENST00000502706 C9orf116Q5BN46 136 aaPredicted RBP2.92□□□□□ -1.94
RFC1-204ENST00000502706 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
RFC1-204ENST00000502706 NCR3O14931 201 aa2.91□□□□□ -1.94
RFC1-204ENST00000502706 ZNF625Q96I27 306 aaPredicted RBP2.91□□□□□ -1.94
RFC1-204ENST00000502706 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
RFC1-204ENST00000502706 A0A096LNI7 61 aa2.9□□□□□ -1.95
RFC1-204ENST00000502706 NREPQ16612 68 aa2.9□□□□□ -1.95
RFC1-204ENST00000502706 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
RFC1-204ENST00000502706 GVQW2A0A096LPI5 108 aaPredicted RBP2.89□□□□□ -1.95
RFC1-204ENST00000502706 TRAV22A0A0B4J277 110 aa2.89□□□□□ -1.95
RFC1-204ENST00000502706 IGKV3OR2-268A0A0C4DH90 116 aa2.89□□□□□ -1.95
RFC1-204ENST00000502706 LIMD2Q9BT23 127 aa2.89□□□□□ -1.95
RFC1-204ENST00000502706 M0QY20 66 aa2.88□□□□□ -1.95
RFC1-204ENST00000502706 CYP4F30PQ9H0H9 118 aa2.88□□□□□ -1.95
RFC1-204ENST00000502706 LOC110117498A0A087WWA1 95 aa2.87□□□□□ -1.95
RFC1-204ENST00000502706 IGKV2-29A2NJV5 120 aaPredicted RBP2.87□□□□□ -1.95
RFC1-204ENST00000502706 PDE6GP18545 87 aa2.87□□□□□ -1.95
RFC1-204ENST00000502706 SPTSSBQ8NFR3 76 aa2.87□□□□□ -1.95
RFC1-204ENST00000502706 SMIM11BQ8TCY0 68 aa2.87□□□□□ -1.95
RFC1-204ENST00000502706 CHKB-CPT1BH3BT56 60 aa2.86□□□□□ -1.95
RFC1-204ENST00000502706 Q5VV11 94 aa2.86□□□□□ -1.95
RFC1-204ENST00000502706 HCG22E2RYF7 251 aa2.85□□□□□ -1.95
RFC1-204ENST00000502706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.84□□□□□ -1.95
RFC1-204ENST00000502706 INE1O15225 51 aa2.84□□□□□ -1.95
RFC1-204ENST00000502706 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
RFC1-204ENST00000502706 CDKN2A-AS1Q9UH64 79 aa2.83□□□□□ -1.96
RFC1-204ENST00000502706 ELOF1P60002 83 aaKnown RBP2.82□□□□□ -1.96
RFC1-204ENST00000502706 NDUFB1O75438 58 aa2.81□□□□□ -1.96
RFC1-204ENST00000502706 PRR15LQ9BU68 103 aa2.81□□□□□ -1.96
RFC1-204ENST00000502706 LINC00158P58513 81 aa2.8□□□□□ -1.96
RFC1-204ENST00000502706 ZCCHC13Q8WW36 166 aaKnown RBP2.8□□□□□ -1.96
RFC1-204ENST00000502706 CDC42SE2Q9NRR3 84 aa2.8□□□□□ -1.96
RFC1-204ENST00000502706 LOC101927531A0A1B0GV80 90 aa2.79□□□□□ -1.96
RFC1-204ENST00000502706 SPAG11BQ08648 103 aa2.79□□□□□ -1.96
RFC1-204ENST00000502706 COX7B2Q8TF08 81 aa2.79□□□□□ -1.96
RFC1-204ENST00000502706 MUC17Q685J3 4493 aa2.78□□□□□ -1.97
RFC1-204ENST00000502706 ETDCA0A1B0GVM5 59 aa2.77□□□□□ -1.97
RFC1-204ENST00000502706 LINC00575Q6W349 94 aa2.77□□□□□ -1.97
RFC1-204ENST00000502706 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
RFC1-204ENST00000502706 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
RFC1-204ENST00000502706 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
RFC1-204ENST00000502706 C6orf48Q9UBA6 75 aa2.76□□□□□ -1.97
RFC1-204ENST00000502706 COX7BP24311 80 aa2.75□□□□□ -1.97
RFC1-204ENST00000502706 SSPOA2VEC9 5147 aa2.74□□□□□ -1.97
RFC1-204ENST00000502706 LINC01558Q9Y6Z2 57 aa2.74□□□□□ -1.97
RFC1-204ENST00000502706 TOMM7Q9P0U1 55 aa2.73□□□□□ -1.97
RFC1-204ENST00000502706 Q6ZQY7 126 aa2.71□□□□□ -1.98
RFC1-204ENST00000502706 COX17Q14061 63 aa2.7□□□□□ -1.98
RFC1-204ENST00000502706 KCNQ1DNQ9H478 68 aa2.7□□□□□ -1.98
RFC1-204ENST00000502706 USH2AO75445 5202 aa2.7□□□□□ -1.98
RFC1-204ENST00000502706 Q8IZM0 81 aa2.69□□□□□ -1.98
RFC1-204ENST00000502706 SPINK7P58062 85 aa2.68□□□□□ -1.98
RFC1-204ENST00000502706 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
RFC1-204ENST00000502706 PCOTHQ58A44 107 aa2.67□□□□□ -1.98
RFC1-204ENST00000502706 KRTAP13-1Q8IUC0 172 aa2.67□□□□□ -1.98
RFC1-204ENST00000502706 H0Y9P7 68 aa2.66□□□□□ -1.98
RFC1-204ENST00000502706 PRLHP81277 87 aa2.66□□□□□ -1.98
RFC1-204ENST00000502706 SPAG11AQ6PDA7 123 aa2.66□□□□□ -1.98
RFC1-204ENST00000502706 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
RFC1-204ENST00000502706 KRTAP10-10P60014 251 aa2.65□□□□□ -1.99
RFC1-204ENST00000502706 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
RFC1-204ENST00000502706 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
RFC1-204ENST00000502706 IGLV5-48A0A075B6I7 105 aa2.62□□□□□ -1.99
RFC1-204ENST00000502706 K7EQZ3 153 aa2.62□□□□□ -1.99
RFC1-204ENST00000502706 SPINK1P00995 79 aa2.62□□□□□ -1.99
RFC1-204ENST00000502706 SPRR4Q96PI1 79 aa2.62□□□□□ -1.99
RFC1-204ENST00000502706 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
RFC1-204ENST00000502706 MT1HP80294 61 aa2.6□□□□□ -1.99
RFC1-204ENST00000502706 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
RFC1-204ENST00000502706 RPS29P62273 56 aaKnown RBP2.59□□□□□ -1.99
RFC1-204ENST00000502706 WFDC13Q8IUB5 93 aa2.59□□□□□ -1.99
RFC1-204ENST00000502706 KRTAP12-1P59990 96 aa2.58□□□□□ -2
RFC1-204ENST00000502706 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
RFC1-204ENST00000502706 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
RFC1-204ENST00000502706 M0R2T5 61 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms