RNA–Protein interactions for RNA: ENST00000500728.2

LRPAP1-202, Transcript of LDL receptor related protein associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPAP1, Length 7,819 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-202ENST00000500728 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.55
LRPAP1-202ENST00000500728 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
LRPAP1-202ENST00000500728 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
LRPAP1-202ENST00000500728 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
LRPAP1-202ENST00000500728 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
LRPAP1-202ENST00000500728 DNAH2Q9P225 4427 aa5.08□□□□□ -1.6
LRPAP1-202ENST00000500728 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
LRPAP1-202ENST00000500728 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
LRPAP1-202ENST00000500728 FRAS1Q86XX4 4008 aa5.05□□□□□ -1.6
LRPAP1-202ENST00000500728 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
LRPAP1-202ENST00000500728 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
LRPAP1-202ENST00000500728 ANK2Q01484 3957 aa4.96□□□□□ -1.62
LRPAP1-202ENST00000500728 DNAH10Q8IVF4 4471 aa4.91□□□□□ -1.62
LRPAP1-202ENST00000500728 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
LRPAP1-202ENST00000500728 DNAH9Q9NYC9 4486 aa4.89□□□□□ -1.63
LRPAP1-202ENST00000500728 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
LRPAP1-202ENST00000500728 LYSTQ99698 3801 aa4.88□□□□□ -1.63
LRPAP1-202ENST00000500728 SPRR2EP22531 72 aa4.88□□□□□ -1.63
LRPAP1-202ENST00000500728 SPRR2BP35325 72 aa4.88□□□□□ -1.63
LRPAP1-202ENST00000500728 SPRR2AP35326 72 aa4.88□□□□□ -1.63
LRPAP1-202ENST00000500728 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
LRPAP1-202ENST00000500728 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
LRPAP1-202ENST00000500728 MT1HP80294 61 aa4.87□□□□□ -1.63
LRPAP1-202ENST00000500728 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
LRPAP1-202ENST00000500728 CMYA5Q8N3K9 4069 aa4.84□□□□□ -1.63
LRPAP1-202ENST00000500728 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
LRPAP1-202ENST00000500728 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
LRPAP1-202ENST00000500728 LCE3CQ5T5A8 94 aa4.77□□□□□ -1.65
LRPAP1-202ENST00000500728 MT2AP02795 61 aa4.72□□□□□ -1.65
LRPAP1-202ENST00000500728 SPRR2DP22532 72 aa4.72□□□□□ -1.65
LRPAP1-202ENST00000500728 FAT2Q9NYQ8 4349 aa4.69□□□□□ -1.66
LRPAP1-202ENST00000500728 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
LRPAP1-202ENST00000500728 MT1FP04733 61 aa4.66□□□□□ -1.66
LRPAP1-202ENST00000500728 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
LRPAP1-202ENST00000500728 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
LRPAP1-202ENST00000500728 DNAH5Q8TE73 4624 aa4.64□□□□□ -1.67
LRPAP1-202ENST00000500728 PLECQ15149 4684 aaKnown RBP4.63□□□□□ -1.67
LRPAP1-202ENST00000500728 DNAH17Q9UFH2 4485 aa4.61□□□□□ -1.67
LRPAP1-202ENST00000500728 DNAH6Q9C0G6 4158 aa4.6□□□□□ -1.67
LRPAP1-202ENST00000500728 LCE2BO14633 110 aa4.59□□□□□ -1.67
LRPAP1-202ENST00000500728 PRKDCP78527 4128 aaKnown RBP4.55□□□□□ -1.68
LRPAP1-202ENST00000500728 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
LRPAP1-202ENST00000500728 STARD9Q9P2P6 4700 aa4.53□□□□□ -1.68
LRPAP1-202ENST00000500728 DYNC2H1Q8NCM8 4307 aaKnown RBP4.53□□□□□ -1.68
LRPAP1-202ENST00000500728 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
LRPAP1-202ENST00000500728 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
LRPAP1-202ENST00000500728 FAT1Q14517 4588 aa4.52□□□□□ -1.69
LRPAP1-202ENST00000500728 VPS13DQ5THJ4 4388 aa4.5□□□□□ -1.69
LRPAP1-202ENST00000500728 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
LRPAP1-202ENST00000500728 MT1GP13640 62 aa4.48□□□□□ -1.69
LRPAP1-202ENST00000500728 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.69
LRPAP1-202ENST00000500728 LCE2CQ5TA81 110 aa4.39□□□□□ -1.71
LRPAP1-202ENST00000500728 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
LRPAP1-202ENST00000500728 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.71
LRPAP1-202ENST00000500728 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
LRPAP1-202ENST00000500728 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
LRPAP1-202ENST00000500728 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
LRPAP1-202ENST00000500728 MT4P47944 62 aa4.29□□□□□ -1.72
LRPAP1-202ENST00000500728 KRTAP17-1Q9BYP8 105 aa4.29□□□□□ -1.72
LRPAP1-202ENST00000500728 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.72
LRPAP1-202ENST00000500728 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
LRPAP1-202ENST00000500728 MT1XP80297 61 aa4.27□□□□□ -1.73
LRPAP1-202ENST00000500728 FAT3Q8TDW7 4589 aa4.26□□□□□ -1.73
LRPAP1-202ENST00000500728 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
LRPAP1-202ENST00000500728 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
LRPAP1-202ENST00000500728 PKD1P98161 4303 aa4.21□□□□□ -1.74
LRPAP1-202ENST00000500728 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
LRPAP1-202ENST00000500728 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
LRPAP1-202ENST00000500728 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
LRPAP1-202ENST00000500728 LPAP08519 4548 aa4.17□□□□□ -1.74
LRPAP1-202ENST00000500728 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.74
LRPAP1-202ENST00000500728 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
LRPAP1-202ENST00000500728 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
LRPAP1-202ENST00000500728 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
LRPAP1-202ENST00000500728 MT1BP07438 61 aa4.11□□□□□ -1.75
LRPAP1-202ENST00000500728 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
LRPAP1-202ENST00000500728 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
LRPAP1-202ENST00000500728 RYR1P21817 5038 aa4.06□□□□□ -1.76
LRPAP1-202ENST00000500728 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
LRPAP1-202ENST00000500728 PRM1P04553 51 aa4.04□□□□□ -1.76
LRPAP1-202ENST00000500728 DNHD1Q96M86 4753 aa4.02□□□□□ -1.77
LRPAP1-202ENST00000500728 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
LRPAP1-202ENST00000500728 HSPG2P98160 4391 aa4.01□□□□□ -1.77
LRPAP1-202ENST00000500728 LCE1DQ5T752 114 aa4□□□□□ -1.77
LRPAP1-202ENST00000500728 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
LRPAP1-202ENST00000500728 TNXBP22105 4242 aa3.97□□□□□ -1.77
LRPAP1-202ENST00000500728 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.77
LRPAP1-202ENST00000500728 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
LRPAP1-202ENST00000500728 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
LRPAP1-202ENST00000500728 MT1LQ93083 61 aa3.91□□□□□ -1.78
LRPAP1-202ENST00000500728 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
LRPAP1-202ENST00000500728 MT3P25713 68 aa3.85□□□□□ -1.79
LRPAP1-202ENST00000500728 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
LRPAP1-202ENST00000500728 MT1EP04732 61 aa3.84□□□□□ -1.79
LRPAP1-202ENST00000500728 LRP2P98164 4655 aa3.83□□□□□ -1.8
LRPAP1-202ENST00000500728 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
LRPAP1-202ENST00000500728 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
LRPAP1-202ENST00000500728 RYR3Q15413 4870 aa3.79□□□□□ -1.8
LRPAP1-202ENST00000500728 MT1MQ8N339 61 aa3.76□□□□□ -1.81
LRPAP1-202ENST00000500728 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms