RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SNX13-212ENST00000498463 Q5VSD8 79 aa2.94□□□□□ -1.94
SNX13-212ENST00000498463 USP9YO00507 2555 aaPredicted RBP2.94□□□□□ -1.94
SNX13-212ENST00000498463 TEX15Q9BXT5 2789 aa2.93□□□□□ -1.94
SNX13-212ENST00000498463 CMYA5Q8N3K9 4069 aa2.93□□□□□ -1.94
SNX13-212ENST00000498463 ABCA12Q86UK0 2595 aa2.92□□□□□ -1.94
SNX13-212ENST00000498463 ITPR3Q14573 2671 aa2.91□□□□□ -1.94
SNX13-212ENST00000498463 ZANQ9Y493 2812 aa2.9□□□□□ -1.95
SNX13-212ENST00000498463 F8P00451 2351 aa2.89□□□□□ -1.95
SNX13-212ENST00000498463 PDZD2O15018 2839 aa2.88□□□□□ -1.95
SNX13-212ENST00000498463 POLQO75417 2590 aa2.88□□□□□ -1.95
SNX13-212ENST00000498463 APCP25054 2843 aa2.88□□□□□ -1.95
SNX13-212ENST00000498463 CENPEQ02224 2701 aa2.88□□□□□ -1.95
SNX13-212ENST00000498463 DNAH3Q8TD57 4116 aa2.87□□□□□ -1.95
SNX13-212ENST00000498463 ITPR2Q14571 2701 aa2.86□□□□□ -1.95
SNX13-212ENST00000498463 MXRA5Q9NR99 2828 aa2.84□□□□□ -1.95
SNX13-212ENST00000498463 TLN2Q9Y4G6 2542 aa2.84□□□□□ -1.95
SNX13-212ENST00000498463 SONP18583 2426 aaKnown RBP2.83□□□□□ -1.96
SNX13-212ENST00000498463 CCDC168Q8NDH2 2452 aa2.82□□□□□ -1.96
SNX13-212ENST00000498463 MTORP42345 2549 aa2.82□□□□□ -1.96
SNX13-212ENST00000498463 ANK2Q01484 3957 aa2.82□□□□□ -1.96
SNX13-212ENST00000498463 FLNAP21333 2647 aaKnown RBP2.81□□□□□ -1.96
SNX13-212ENST00000498463 NF1P21359 2839 aa2.8□□□□□ -1.96
SNX13-212ENST00000498463 COL6A5A8TX70 2615 aa2.8□□□□□ -1.96
SNX13-212ENST00000498463 SETD2Q9BYW2 2564 aaPredicted RBP2.8□□□□□ -1.96
SNX13-212ENST00000498463 HIVEP1P15822 2718 aa2.79□□□□□ -1.96
SNX13-212ENST00000498463 TRRAPQ9Y4A5 3859 aa2.78□□□□□ -1.96
SNX13-212ENST00000498463 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SNX13-212ENST00000498463 DNAH1Q9P2D7 4330 aa2.77□□□□□ -1.97
SNX13-212ENST00000498463 VWFP04275 2813 aa2.77□□□□□ -1.97
SNX13-212ENST00000498463 HUWE1Q7Z6Z7 4374 aaKnown RBP2.76□□□□□ -1.97
SNX13-212ENST00000498463 DNHD1Q96M86 4753 aa2.76□□□□□ -1.97
SNX13-212ENST00000498463 ACANP16112 2415 aa2.76□□□□□ -1.97
SNX13-212ENST00000498463 SMR3AQ99954 134 aa2.75□□□□□ -1.97
SNX13-212ENST00000498463 NIPBLQ6KC79 2804 aaeCLIP2.74□□□□□ -1.97
SNX13-212ENST00000498463 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
SNX13-212ENST00000498463 DYNC2H1Q8NCM8 4307 aaKnown RBP2.74□□□□□ -1.97
SNX13-212ENST00000498463 DNAH9Q9NYC9 4486 aa2.74□□□□□ -1.97
SNX13-212ENST00000498463 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
SNX13-212ENST00000498463 NSD1Q96L73 2696 aaPredicted RBP2.74□□□□□ -1.97
SNX13-212ENST00000498463 SRRM2Q9UQ35 2752 aaKnown RBP2.73□□□□□ -1.97
SNX13-212ENST00000498463 TNP1P09430 55 aa2.73□□□□□ -1.97
SNX13-212ENST00000498463 JMJD1CQ15652 2540 aa2.73□□□□□ -1.97
SNX13-212ENST00000498463 KRTAP10-4P60372 401 aaPredicted RBP2.72□□□□□ -1.97
SNX13-212ENST00000498463 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
SNX13-212ENST00000498463 STAB1Q9NY15 2570 aa2.71□□□□□ -1.98
SNX13-212ENST00000498463 MEGF8Q7Z7M0 2845 aa2.71□□□□□ -1.98
SNX13-212ENST00000498463 VPS13DQ5THJ4 4388 aa2.7□□□□□ -1.98
SNX13-212ENST00000498463 TENM1Q9UKZ4 2725 aa2.7□□□□□ -1.98
SNX13-212ENST00000498463 ATRQ13535 2644 aa2.69□□□□□ -1.98
SNX13-212ENST00000498463 C9orf92A6NGG3 77 aa2.69□□□□□ -1.98
SNX13-212ENST00000498463 DNAH7Q8WXX0 4024 aa2.68□□□□□ -1.98
SNX13-212ENST00000498463 PCLOQ9Y6V0 5065 aa2.66□□□□□ -1.98
SNX13-212ENST00000498463 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
SNX13-212ENST00000498463 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
SNX13-212ENST00000498463 NBEAL1Q6ZS30 2694 aa2.65□□□□□ -1.98
SNX13-212ENST00000498463 DNAH10Q8IVF4 4471 aa2.65□□□□□ -1.99
SNX13-212ENST00000498463 LYSTQ99698 3801 aa2.65□□□□□ -1.99
SNX13-212ENST00000498463 PLECQ15149 4684 aaKnown RBP2.64□□□□□ -1.99
SNX13-212ENST00000498463 DMBT1Q9UGM3 2413 aaPredicted RBP2.63□□□□□ -1.99
SNX13-212ENST00000498463 NBEAL2Q6ZNJ1 2754 aa2.63□□□□□ -1.99
SNX13-212ENST00000498463 TGP01266 2768 aa2.62□□□□□ -1.99
SNX13-212ENST00000498463 DNAH2Q9P225 4427 aa2.62□□□□□ -1.99
SNX13-212ENST00000498463 DNAH6Q9C0G6 4158 aa2.62□□□□□ -1.99
SNX13-212ENST00000498463 PKD1L1Q8TDX9 2849 aa2.6□□□□□ -1.99
SNX13-212ENST00000498463 DNAH17Q9UFH2 4485 aa2.59□□□□□ -1.99
SNX13-212ENST00000498463 STARD9Q9P2P6 4700 aa2.59□□□□□ -2
SNX13-212ENST00000498463 CSMD3Q7Z407 3707 aa2.59□□□□□ -2
SNX13-212ENST00000498463 TENM3Q9P273 2699 aa2.58□□□□□ -2
SNX13-212ENST00000498463 DNAH11Q96DT5 4516 aa2.58□□□□□ -2
SNX13-212ENST00000498463 MGAM2Q2M2H8 2515 aa2.57□□□□□ -2
SNX13-212ENST00000498463 NOTCH1P46531 2555 aa2.56□□□□□ -2
SNX13-212ENST00000498463 FRAS1Q86XX4 4008 aa2.56□□□□□ -2
SNX13-212ENST00000498463 DNAH8Q96JB1 4490 aa2.56□□□□□ -2
SNX13-212ENST00000498463 HECTD4Q9Y4D8 3996 aa2.54□□□□□ -2
SNX13-212ENST00000498463 FAT2Q9NYQ8 4349 aa2.54□□□□□ -2
SNX13-212ENST00000498463 KMT2AQ03164 3969 aa2.53□□□□□ -2
SNX13-212ENST00000498463 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
SNX13-212ENST00000498463 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
SNX13-212ENST00000498463 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
SNX13-212ENST00000498463 COL7A1Q02388 2944 aa2.52□□□□□ -2.01
SNX13-212ENST00000498463 BIRC6Q9NR09 4857 aa2.52□□□□□ -2.01
SNX13-212ENST00000498463 HYDINQ4G0P3 5121 aa2.5□□□□□ -2.01
SNX13-212ENST00000498463 RYR3Q15413 4870 aa2.5□□□□□ -2.01
SNX13-212ENST00000498463 RYR1P21817 5038 aa2.48□□□□□ -2.01
SNX13-212ENST00000498463 PKD1P98161 4303 aa2.47□□□□□ -2.01
SNX13-212ENST00000498463 STAB2Q8WWQ8 2551 aa2.47□□□□□ -2.01
SNX13-212ENST00000498463 KIAA1109Q2LD37 5005 aa2.46□□□□□ -2.02
SNX13-212ENST00000498463 DYNC1H1Q14204 4646 aaKnown RBP2.44□□□□□ -2.02
SNX13-212ENST00000498463 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
SNX13-212ENST00000498463 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
SNX13-212ENST00000498463 KMT2CQ8NEZ4 4911 aaKnown RBP2.41□□□□□ -2.02
SNX13-212ENST00000498463 PKHD1P08F94 4074 aa2.4□□□□□ -2.02
SNX13-212ENST00000498463 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.02
SNX13-212ENST00000498463 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
SNX13-212ENST00000498463 PKHD1L1Q86WI1 4243 aa2.4□□□□□ -2.03
SNX13-212ENST00000498463 RYR2Q92736 4967 aa2.38□□□□□ -2.03
SNX13-212ENST00000498463 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
SNX13-212ENST00000498463 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
SNX13-212ENST00000498463 VPS13BQ7Z7G8 4022 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms