RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 FAT4Q6V0I7 4981 aa1.09□□□□□ -2.23
CALD1-224ENST00000498254 DEFB1P60022 68 aa1.09□□□□□ -2.23
CALD1-224ENST00000498254 COL12A1Q99715 3063 aa1.08□□□□□ -2.24
CALD1-224ENST00000498254 DSPP15924 2871 aaKnown RBP1.08□□□□□ -2.24
CALD1-224ENST00000498254 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
CALD1-224ENST00000498254 SONP18583 2426 aaKnown RBP1.07□□□□□ -2.24
CALD1-224ENST00000498254 LOC400499M0QZD8 3231 aa1.07□□□□□ -2.24
CALD1-224ENST00000498254 TGP01266 2768 aa1.07□□□□□ -2.24
CALD1-224ENST00000498254 STAB2Q8WWQ8 2551 aa1.07□□□□□ -2.24
CALD1-224ENST00000498254 MYO15AQ9UKN7 3530 aa1.07□□□□□ -2.24
CALD1-224ENST00000498254 H0YGG7 62 aa1.06□□□□□ -2.24
CALD1-224ENST00000498254 HERC2O95714 4834 aa1.06□□□□□ -2.24
CALD1-224ENST00000498254 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
CALD1-224ENST00000498254 DMBT1Q9UGM3 2413 aaPredicted RBP1.05□□□□□ -2.24
CALD1-224ENST00000498254 NOP10Q9NPE3 64 aaKnown RBP1.05□□□□□ -2.24
CALD1-224ENST00000498254 WDFY3Q8IZQ1 3526 aa1.05□□□□□ -2.24
CALD1-224ENST00000498254 MGAQ8IWI9 3026 aa1.05□□□□□ -2.24
CALD1-224ENST00000498254 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
CALD1-224ENST00000498254 NBPF19A0A087WUL8 3843 aa1.04□□□□□ -2.24
CALD1-224ENST00000498254 FREM2Q5SZK8 3169 aa1.04□□□□□ -2.24
CALD1-224ENST00000498254 VPS13DQ5THJ4 4388 aa1.04□□□□□ -2.24
CALD1-224ENST00000498254 CSMD2Q7Z408 3487 aa1.03□□□□□ -2.24
CALD1-224ENST00000498254 MYCBP2O75592 4640 aa1.03□□□□□ -2.24
CALD1-224ENST00000498254 HTN1P15515 57 aa1.03□□□□□ -2.24
CALD1-224ENST00000498254 DNAH11Q96DT5 4516 aa1.03□□□□□ -2.25
CALD1-224ENST00000498254 CSPG4Q6UVK1 2322 aa1.02□□□□□ -2.25
CALD1-224ENST00000498254 COX14Q96I36 57 aa1.02□□□□□ -2.25
CALD1-224ENST00000498254 SPENQ96T58 3664 aaKnown RBP1.02□□□□□ -2.25
CALD1-224ENST00000498254 SPTBN2O15020 2390 aa1.01□□□□□ -2.25
CALD1-224ENST00000498254 WNK1Q9H4A3 2382 aa1.01□□□□□ -2.25
CALD1-224ENST00000498254 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
CALD1-224ENST00000498254 DMXL1Q9Y485 3027 aa1□□□□□ -2.25
CALD1-224ENST00000498254 DEFB136Q30KP8 78 aa1□□□□□ -2.25
CALD1-224ENST00000498254 RHPN1-AS1Q9BWJ2 59 aa1□□□□□ -2.25
CALD1-224ENST00000498254 AKAP6Q13023 2319 aa1□□□□□ -2.25
CALD1-224ENST00000498254 TRIOO75962 3097 aa1□□□□□ -2.25
CALD1-224ENST00000498254 DMXL2Q8TDJ6 3036 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 RNF213Q63HN8 5207 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 ITPR2Q14571 2701 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 ZZEF1O43149 2961 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 DEFB110Q30KQ9 67 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 ACANP16112 2415 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 APCP25054 2843 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 COL7A1Q02388 2944 aa0.99□□□□□ -2.25
CALD1-224ENST00000498254 SVEP1Q4LDE5 3571 aa0.98□□□□□ -2.25
CALD1-224ENST00000498254 DEFB108BQ8NET1 73 aa0.98□□□□□ -2.25
CALD1-224ENST00000498254 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
CALD1-224ENST00000498254 DCHS2Q6V1P9 2916 aa0.98□□□□□ -2.25
CALD1-224ENST00000498254 CACNA1HO95180 2353 aa0.97□□□□□ -2.25
CALD1-224ENST00000498254 SPTBN1Q01082 2364 aaKnown RBP0.97□□□□□ -2.25
CALD1-224ENST00000498254 CUBNO60494 3623 aa0.97□□□□□ -2.25
CALD1-224ENST00000498254 ATMQ13315 3056 aa0.97□□□□□ -2.25
CALD1-224ENST00000498254 A0A096LNI7 61 aa0.97□□□□□ -2.25
CALD1-224ENST00000498254 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
CALD1-224ENST00000498254 F8P00451 2351 aa0.96□□□□□ -2.26
CALD1-224ENST00000498254 SRRM2Q9UQ35 2752 aaKnown RBP0.96□□□□□ -2.26
CALD1-224ENST00000498254 SPINK6Q6UWN8 80 aa0.96□□□□□ -2.26
CALD1-224ENST00000498254 HMCN2Q8NDA2 5059 aa0.96□□□□□ -2.26
CALD1-224ENST00000498254 KMT2DO14686 5537 aa0.95□□□□□ -2.26
CALD1-224ENST00000498254 NBASA2RRP1 2371 aa0.94□□□□□ -2.26
CALD1-224ENST00000498254 VPS13CQ709C8 3753 aa0.94□□□□□ -2.26
CALD1-224ENST00000498254 H3BUX3 64 aa0.94□□□□□ -2.26
CALD1-224ENST00000498254 M0QZ58 72 aa0.94□□□□□ -2.26
CALD1-224ENST00000498254 DNAH8Q96JB1 4490 aa0.94□□□□□ -2.26
CALD1-224ENST00000498254 HIVEP1P15822 2718 aa0.94□□□□□ -2.26
CALD1-224ENST00000498254 ACACAQ13085 2346 aa0.93□□□□□ -2.26
CALD1-224ENST00000498254 SACSQ9NZJ4 4579 aa0.93□□□□□ -2.26
CALD1-224ENST00000498254 CENPEQ02224 2701 aa0.91□□□□□ -2.26
CALD1-224ENST00000498254 APC2O95996 2303 aa0.91□□□□□ -2.26
CALD1-224ENST00000498254 A0A096LPF7 62 aa0.91□□□□□ -2.26
CALD1-224ENST00000498254 AKAP9Q99996 3911 aa0.91□□□□□ -2.26
CALD1-224ENST00000498254 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.26
CALD1-224ENST00000498254 MAP1AP78559 2803 aaPredicted RBP0.9□□□□□ -2.26
CALD1-224ENST00000498254 DEFB135Q30KP9 77 aa0.9□□□□□ -2.27
CALD1-224ENST00000498254 ADGRG4Q8IZF6 3080 aa0.9□□□□□ -2.27
CALD1-224ENST00000498254 CSMD3Q7Z407 3707 aa0.89□□□□□ -2.27
CALD1-224ENST00000498254 KRTAP2-3P0C7H8 128 aa0.89□□□□□ -2.27
CALD1-224ENST00000498254 LYSTQ99698 3801 aa0.89□□□□□ -2.27
CALD1-224ENST00000498254 KRTAP2-4Q9BYR9 128 aa0.89□□□□□ -2.27
CALD1-224ENST00000498254 MDN1Q9NU22 5596 aa0.89□□□□□ -2.27
CALD1-224ENST00000498254 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
CALD1-224ENST00000498254 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
CALD1-224ENST00000498254 DMDP11532 3685 aa0.88□□□□□ -2.27
CALD1-224ENST00000498254 ZNF469Q96JG9 3925 aaPredicted RBP0.87□□□□□ -2.27
CALD1-224ENST00000498254 VPS13BQ7Z7G8 4022 aa0.87□□□□□ -2.27
CALD1-224ENST00000498254 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
CALD1-224ENST00000498254 TACC2O95359 2948 aa0.87□□□□□ -2.27
CALD1-224ENST00000498254 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
CALD1-224ENST00000498254 TNP1P09430 55 aa0.86□□□□□ -2.27
CALD1-224ENST00000498254 DYNC2H1Q8NCM8 4307 aaKnown RBP0.85□□□□□ -2.27
CALD1-224ENST00000498254 ANK2Q01484 3957 aa0.85□□□□□ -2.27
CALD1-224ENST00000498254 M0R2T5 61 aa0.85□□□□□ -2.27
CALD1-224ENST00000498254 DNAH2Q9P225 4427 aa0.85□□□□□ -2.27
CALD1-224ENST00000498254 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
CALD1-224ENST00000498254 DNAH10Q8IVF4 4471 aa0.85□□□□□ -2.27
CALD1-224ENST00000498254 DEFB124Q8NES8 71 aa0.84□□□□□ -2.27
CALD1-224ENST00000498254 PKHD1L1Q86WI1 4243 aa0.84□□□□□ -2.28
CALD1-224ENST00000498254 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.28
CALD1-224ENST00000498254 LAMA5O15230 3695 aa0.84□□□□□ -2.28
CALD1-224ENST00000498254 H3BNG1 76 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms