RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 HIVEP2P31629 2446 aa3.13□□□□□ -1.91
NEB-216ENST00000497809 K7EIL1 84 aa3.12□□□□□ -1.91
NEB-216ENST00000497809 COX14Q96I36 57 aa3.12□□□□□ -1.91
NEB-216ENST00000497809 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
NEB-216ENST00000497809 KLK9Q2XQG4 91 aa3.11□□□□□ -1.91
NEB-216ENST00000497809 SONP18583 2426 aaKnown RBP3.1□□□□□ -1.91
NEB-216ENST00000497809 DEFB119Q8N690 84 aa3.1□□□□□ -1.91
NEB-216ENST00000497809 TENM3Q9P273 2699 aa3.1□□□□□ -1.91
NEB-216ENST00000497809 MUC2Q02817 5179 aa3.1□□□□□ -1.91
NEB-216ENST00000497809 NOTCH3Q9UM47 2321 aa3.09□□□□□ -1.91
NEB-216ENST00000497809 MXRA5Q9NR99 2828 aa3.09□□□□□ -1.92
NEB-216ENST00000497809 SPINK1P00995 79 aa3.09□□□□□ -1.92
NEB-216ENST00000497809 PRO0255Q9UI72 69 aa3.07□□□□□ -1.92
NEB-216ENST00000497809 DEFB1P60022 68 aa3.07□□□□□ -1.92
NEB-216ENST00000497809 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
NEB-216ENST00000497809 S4R3F8 94 aa3.06□□□□□ -1.92
NEB-216ENST00000497809 ROS1P08922 2347 aa3.06□□□□□ -1.92
NEB-216ENST00000497809 MAP1AP78559 2803 aaPredicted RBP3.05□□□□□ -1.92
NEB-216ENST00000497809 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
NEB-216ENST00000497809 SPRR1BP22528 89 aa3.05□□□□□ -1.92
NEB-216ENST00000497809 ABCA13Q86UQ4 5058 aa3.04□□□□□ -1.92
NEB-216ENST00000497809 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
NEB-216ENST00000497809 HERC1Q15751 4861 aa3□□□□□ -1.93
NEB-216ENST00000497809 VPS13CQ709C8 3753 aa2.98□□□□□ -1.93
NEB-216ENST00000497809 HTN1P15515 57 aa2.97□□□□□ -1.93
NEB-216ENST00000497809 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
NEB-216ENST00000497809 DYNC2H1Q8NCM8 4307 aaKnown RBP2.95□□□□□ -1.94
NEB-216ENST00000497809 A0A0D9SG42 100 aa2.95□□□□□ -1.94
NEB-216ENST00000497809 Q5VSD8 79 aa2.95□□□□□ -1.94
NEB-216ENST00000497809 RHPN1-AS1Q9BWJ2 59 aa2.95□□□□□ -1.94
NEB-216ENST00000497809 LCE3DQ9BYE3 92 aa2.94□□□□□ -1.94
NEB-216ENST00000497809 ZNF469Q96JG9 3925 aaPredicted RBP2.93□□□□□ -1.94
NEB-216ENST00000497809 AKAP6Q13023 2319 aa2.93□□□□□ -1.94
NEB-216ENST00000497809 DEFB110Q30KQ9 67 aa2.93□□□□□ -1.94
NEB-216ENST00000497809 DNAH1Q9P2D7 4330 aa2.91□□□□□ -1.94
NEB-216ENST00000497809 DEFB108BQ8NET1 73 aa2.91□□□□□ -1.94
NEB-216ENST00000497809 SVEP1Q4LDE5 3571 aa2.9□□□□□ -1.95
NEB-216ENST00000497809 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
NEB-216ENST00000497809 NOP10Q9NPE3 64 aaKnown RBP2.9□□□□□ -1.95
NEB-216ENST00000497809 SMR3AQ99954 134 aa2.89□□□□□ -1.95
NEB-216ENST00000497809 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
NEB-216ENST00000497809 TRRAPQ9Y4A5 3859 aa2.89□□□□□ -1.95
NEB-216ENST00000497809 TACC2O95359 2948 aa2.88□□□□□ -1.95
NEB-216ENST00000497809 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
NEB-216ENST00000497809 DEFB133Q30KQ1 61 aa2.87□□□□□ -1.95
NEB-216ENST00000497809 U3KQA8 63 aa2.85□□□□□ -1.95
NEB-216ENST00000497809 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
NEB-216ENST00000497809 SRRM2Q9UQ35 2752 aaKnown RBP2.84□□□□□ -1.96
NEB-216ENST00000497809 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
NEB-216ENST00000497809 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
NEB-216ENST00000497809 COL7A1Q02388 2944 aa2.83□□□□□ -1.96
NEB-216ENST00000497809 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
NEB-216ENST00000497809 H3BUX3 64 aa2.8□□□□□ -1.96
NEB-216ENST00000497809 DEFB136Q30KP8 78 aa2.8□□□□□ -1.96
NEB-216ENST00000497809 HECTD4Q9Y4D8 3996 aa2.79□□□□□ -1.96
NEB-216ENST00000497809 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
NEB-216ENST00000497809 STAB2Q8WWQ8 2551 aa2.76□□□□□ -1.97
NEB-216ENST00000497809 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
NEB-216ENST00000497809 CMYA5Q8N3K9 4069 aa2.76□□□□□ -1.97
NEB-216ENST00000497809 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
NEB-216ENST00000497809 A0A096LNI7 61 aa2.72□□□□□ -1.97
NEB-216ENST00000497809 ANK3Q12955 4377 aaKnown RBP2.71□□□□□ -1.98
NEB-216ENST00000497809 RNF213Q63HN8 5207 aa2.7□□□□□ -1.98
NEB-216ENST00000497809 M0QZ58 72 aa2.67□□□□□ -1.98
NEB-216ENST00000497809 SPINK6Q6UWN8 80 aa2.67□□□□□ -1.98
NEB-216ENST00000497809 LYSTQ99698 3801 aa2.67□□□□□ -1.98
NEB-216ENST00000497809 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
NEB-216ENST00000497809 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
NEB-216ENST00000497809 SSPOA2VEC9 5147 aa2.62□□□□□ -1.99
NEB-216ENST00000497809 FRAS1Q86XX4 4008 aa2.62□□□□□ -1.99
NEB-216ENST00000497809 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
NEB-216ENST00000497809 HRNRQ86YZ3 2850 aaPredicted RBP2.59□□□□□ -1.99
NEB-216ENST00000497809 A0A096LPF7 62 aa2.59□□□□□ -2
NEB-216ENST00000497809 KRTAP12-3P60328 96 aa2.58□□□□□ -2
NEB-216ENST00000497809 PKHD1P08F94 4074 aa2.58□□□□□ -2
NEB-216ENST00000497809 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
NEB-216ENST00000497809 NEBP20929 6669 aa2.55□□□□□ -2
NEB-216ENST00000497809 KRTAP10-4P60372 401 aaPredicted RBP2.54□□□□□ -2
NEB-216ENST00000497809 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
NEB-216ENST00000497809 HSPG2P98160 4391 aa2.47□□□□□ -2.01
NEB-216ENST00000497809 FAT3Q8TDW7 4589 aa2.47□□□□□ -2.01
NEB-216ENST00000497809 DNAH10Q8IVF4 4471 aa2.46□□□□□ -2.01
NEB-216ENST00000497809 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
NEB-216ENST00000497809 DNAH7Q8WXX0 4024 aa2.46□□□□□ -2.02
NEB-216ENST00000497809 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
NEB-216ENST00000497809 CSMD3Q7Z407 3707 aa2.45□□□□□ -2.02
NEB-216ENST00000497809 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
NEB-216ENST00000497809 HUWE1Q7Z6Z7 4374 aaKnown RBP2.44□□□□□ -2.02
NEB-216ENST00000497809 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
NEB-216ENST00000497809 DYNC1H1Q14204 4646 aaKnown RBP2.44□□□□□ -2.02
NEB-216ENST00000497809 VPS13DQ5THJ4 4388 aa2.42□□□□□ -2.02
NEB-216ENST00000497809 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
NEB-216ENST00000497809 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
NEB-216ENST00000497809 TNP1P09430 55 aa2.4□□□□□ -2.03
NEB-216ENST00000497809 DEFB135Q30KP9 77 aa2.4□□□□□ -2.03
NEB-216ENST00000497809 DNAH11Q96DT5 4516 aa2.39□□□□□ -2.03
NEB-216ENST00000497809 PKHD1L1Q86WI1 4243 aa2.38□□□□□ -2.03
NEB-216ENST00000497809 LINC01556Q5JQF7 62 aa2.38□□□□□ -2.03
NEB-216ENST00000497809 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
NEB-216ENST00000497809 DNAH3Q8TD57 4116 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms