RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 FLNCQ14315 2725 aa2.26□□□□□ -2.05
CUL3-212ENST00000497715 ANK3Q12955 4377 aaKnown RBP2.26□□□□□ -2.05
CUL3-212ENST00000497715 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
CUL3-212ENST00000497715 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
CUL3-212ENST00000497715 DEFB135Q30KP9 77 aa2.24□□□□□ -2.05
CUL3-212ENST00000497715 A0A1B0GVY2 172 aa2.23□□□□□ -2.05
CUL3-212ENST00000497715 ZNF469Q96JG9 3925 aaPredicted RBP2.23□□□□□ -2.05
CUL3-212ENST00000497715 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
CUL3-212ENST00000497715 LINC01556Q5JQF7 62 aa2.22□□□□□ -2.05
CUL3-212ENST00000497715 ACANP16112 2415 aa2.21□□□□□ -2.06
CUL3-212ENST00000497715 SPART-AS1P0CW21 52 aa2.2□□□□□ -2.06
CUL3-212ENST00000497715 KRTAP1-5Q9BYS1 174 aa2.19□□□□□ -2.06
CUL3-212ENST00000497715 NOTCH2Q04721 2471 aa2.19□□□□□ -2.06
CUL3-212ENST00000497715 FBN3Q75N90 2809 aa2.18□□□□□ -2.06
CUL3-212ENST00000497715 STAB2Q8WWQ8 2551 aa2.18□□□□□ -2.06
CUL3-212ENST00000497715 KMT2AQ03164 3969 aa2.17□□□□□ -2.06
CUL3-212ENST00000497715 TEP1Q99973 2627 aaKnown RBP2.17□□□□□ -2.06
CUL3-212ENST00000497715 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
CUL3-212ENST00000497715 ANKRD11Q6UB99 2663 aaPredicted RBP2.16□□□□□ -2.06
CUL3-212ENST00000497715 KRTAP10-1P60331 282 aa2.16□□□□□ -2.06
CUL3-212ENST00000497715 TENM4Q6N022 2769 aa2.15□□□□□ -2.07
CUL3-212ENST00000497715 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
CUL3-212ENST00000497715 ACACBO00763 2458 aa2.14□□□□□ -2.07
CUL3-212ENST00000497715 MYO18BQ8IUG5 2567 aa2.13□□□□□ -2.07
CUL3-212ENST00000497715 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
CUL3-212ENST00000497715 DEFB124Q8NES8 71 aa2.13□□□□□ -2.07
CUL3-212ENST00000497715 DNAH2Q9P225 4427 aa2.13□□□□□ -2.07
CUL3-212ENST00000497715 Q5VSD8 79 aa2.11□□□□□ -2.07
CUL3-212ENST00000497715 MYO9AB2RTY4 2548 aa2.11□□□□□ -2.07
CUL3-212ENST00000497715 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
CUL3-212ENST00000497715 KRTAP10-3P60369 221 aa2.11□□□□□ -2.07
CUL3-212ENST00000497715 TENM3Q9P273 2699 aa2.11□□□□□ -2.07
CUL3-212ENST00000497715 M0QZ58 72 aa2.1□□□□□ -2.07
CUL3-212ENST00000497715 CEP295Q9C0D2 2601 aa2.1□□□□□ -2.07
CUL3-212ENST00000497715 APOBP04114 4563 aaKnown RBP2.1□□□□□ -2.07
CUL3-212ENST00000497715 H3BNG1 76 aa2.1□□□□□ -2.07
CUL3-212ENST00000497715 DNAH9Q9NYC9 4486 aa2.1□□□□□ -2.07
CUL3-212ENST00000497715 STAB1Q9NY15 2570 aa2.09□□□□□ -2.08
CUL3-212ENST00000497715 C9orf92A6NGG3 77 aa2.09□□□□□ -2.08
CUL3-212ENST00000497715 FASNP49327 2511 aaKnown RBP2.08□□□□□ -2.08
CUL3-212ENST00000497715 HUWE1Q7Z6Z7 4374 aaKnown RBP2.08□□□□□ -2.08
CUL3-212ENST00000497715 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
CUL3-212ENST00000497715 NOTCH1P46531 2555 aa2.07□□□□□ -2.08
CUL3-212ENST00000497715 LCE1AQ5T7P2 110 aa2.06□□□□□ -2.08
CUL3-212ENST00000497715 FLNAP21333 2647 aaKnown RBP2.06□□□□□ -2.08
CUL3-212ENST00000497715 NSD1Q96L73 2696 aaPredicted RBP2.05□□□□□ -2.08
CUL3-212ENST00000497715 KRTAP1-4P0C5Y4 121 aa2.04□□□□□ -2.08
CUL3-212ENST00000497715 TENM1Q9UKZ4 2725 aa2.03□□□□□ -2.08
CUL3-212ENST00000497715 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
CUL3-212ENST00000497715 DNAH3Q8TD57 4116 aa2.02□□□□□ -2.09
CUL3-212ENST00000497715 FLNBO75369 2602 aaKnown RBP2.01□□□□□ -2.09
CUL3-212ENST00000497715 PKHD1L1Q86WI1 4243 aa2□□□□□ -2.09
CUL3-212ENST00000497715 DNAH6Q9C0G6 4158 aa2□□□□□ -2.09
CUL3-212ENST00000497715 IGSF10Q6WRI0 2623 aa1.99□□□□□ -2.09
CUL3-212ENST00000497715 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
CUL3-212ENST00000497715 CMYA5Q8N3K9 4069 aa1.99□□□□□ -2.09
CUL3-212ENST00000497715 MAST4O15021 2626 aa1.99□□□□□ -2.09
CUL3-212ENST00000497715 MGAM2Q2M2H8 2515 aa1.97□□□□□ -2.09
CUL3-212ENST00000497715 DYNC2H1Q8NCM8 4307 aaKnown RBP1.97□□□□□ -2.09
CUL3-212ENST00000497715 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.09
CUL3-212ENST00000497715 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
CUL3-212ENST00000497715 PKHD1P08F94 4074 aa1.93□□□□□ -2.1
CUL3-212ENST00000497715 TNP1P09430 55 aa1.93□□□□□ -2.1
CUL3-212ENST00000497715 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
CUL3-212ENST00000497715 PRKDCP78527 4128 aaKnown RBP1.9□□□□□ -2.11
CUL3-212ENST00000497715 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.11
CUL3-212ENST00000497715 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
CUL3-212ENST00000497715 PKD1P98161 4303 aa1.9□□□□□ -2.11
CUL3-212ENST00000497715 LCE3CQ5T5A8 94 aa1.89□□□□□ -2.11
CUL3-212ENST00000497715 VPS13BQ7Z7G8 4022 aa1.89□□□□□ -2.11
CUL3-212ENST00000497715 SMR3AQ99954 134 aa1.87□□□□□ -2.11
CUL3-212ENST00000497715 KRTAP10-12P60413 245 aa1.85□□□□□ -2.11
CUL3-212ENST00000497715 HSPG2P98160 4391 aa1.84□□□□□ -2.11
CUL3-212ENST00000497715 FAT1Q14517 4588 aa1.84□□□□□ -2.12
CUL3-212ENST00000497715 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
CUL3-212ENST00000497715 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
CUL3-212ENST00000497715 KRTAP10-5P60370 271 aa1.82□□□□□ -2.12
CUL3-212ENST00000497715 FAT2Q9NYQ8 4349 aa1.82□□□□□ -2.12
CUL3-212ENST00000497715 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
CUL3-212ENST00000497715 SACSQ9NZJ4 4579 aa1.81□□□□□ -2.12
CUL3-212ENST00000497715 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
CUL3-212ENST00000497715 LRP1BQ9NZR2 4599 aa1.77□□□□□ -2.13
CUL3-212ENST00000497715 RPS29P62273 56 aaKnown RBP1.76□□□□□ -2.13
CUL3-212ENST00000497715 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
CUL3-212ENST00000497715 KRTAP10-4P60372 401 aaPredicted RBP1.76□□□□□ -2.13
CUL3-212ENST00000497715 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
CUL3-212ENST00000497715 KRTAP2-1Q9BYU5 128 aa1.76□□□□□ -2.13
CUL3-212ENST00000497715 PLECQ15149 4684 aaKnown RBP1.74□□□□□ -2.13
CUL3-212ENST00000497715 STARD9Q9P2P6 4700 aa1.73□□□□□ -2.13
CUL3-212ENST00000497715 LPAP08519 4548 aa1.72□□□□□ -2.13
CUL3-212ENST00000497715 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
CUL3-212ENST00000497715 KRTAP21-3Q3LHN1 58 aa1.71□□□□□ -2.14
CUL3-212ENST00000497715 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
CUL3-212ENST00000497715 DYNC1H1Q14204 4646 aaKnown RBP1.71□□□□□ -2.14
CUL3-212ENST00000497715 KIAA1109Q2LD37 5005 aa1.7□□□□□ -2.14
CUL3-212ENST00000497715 M0R2T5 61 aa1.69□□□□□ -2.14
CUL3-212ENST00000497715 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
CUL3-212ENST00000497715 TNXBP22105 4242 aa1.69□□□□□ -2.14
CUL3-212ENST00000497715 DNAH5Q8TE73 4624 aa1.68□□□□□ -2.14
CUL3-212ENST00000497715 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms