RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 PSORS1C2Q9UIG4 136 aa1.55□□□□□ -2.16
MDC1-208ENST00000494654 HECTD4Q9Y4D8 3996 aa1.54□□□□□ -2.16
MDC1-208ENST00000494654 PANO1I0J062 215 aa1.54□□□□□ -2.16
MDC1-208ENST00000494654 K7ERS5 55 aa1.54□□□□□ -2.16
MDC1-208ENST00000494654 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
MDC1-208ENST00000494654 KRTAP16-1A8MUX0 517 aa1.53□□□□□ -2.16
MDC1-208ENST00000494654 Q6ZSA8 131 aa1.53□□□□□ -2.16
MDC1-208ENST00000494654 HERC2O95714 4834 aa1.53□□□□□ -2.16
MDC1-208ENST00000494654 STAB2Q8WWQ8 2551 aa1.53□□□□□ -2.17
MDC1-208ENST00000494654 ABCA13Q86UQ4 5058 aa1.52□□□□□ -2.17
MDC1-208ENST00000494654 STARD9Q9P2P6 4700 aa1.52□□□□□ -2.17
MDC1-208ENST00000494654 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
MDC1-208ENST00000494654 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
MDC1-208ENST00000494654 SPINK6Q6UWN8 80 aa1.52□□□□□ -2.17
MDC1-208ENST00000494654 DNAH5Q8TE73 4624 aa1.52□□□□□ -2.17
MDC1-208ENST00000494654 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
MDC1-208ENST00000494654 A0A1B0GU33 70 aa1.51□□□□□ -2.17
MDC1-208ENST00000494654 NDUFAF8A1L188 74 aa1.51□□□□□ -2.17
MDC1-208ENST00000494654 SPACA4Q8TDM5 124 aa1.51□□□□□ -2.17
MDC1-208ENST00000494654 PLECQ15149 4684 aaKnown RBP1.51□□□□□ -2.17
MDC1-208ENST00000494654 SSBP3-AS1Q7Z2R9 100 aa1.5□□□□□ -2.17
MDC1-208ENST00000494654 TYMSOSQ8TAI1 123 aa1.5□□□□□ -2.17
MDC1-208ENST00000494654 KRTAP1-5Q9BYS1 174 aa1.5□□□□□ -2.17
MDC1-208ENST00000494654 KIAA1109Q2LD37 5005 aa1.5□□□□□ -2.17
MDC1-208ENST00000494654 LUZP6Q538Z0 58 aa1.49□□□□□ -2.17
MDC1-208ENST00000494654 COX6B2Q6YFQ2 88 aa1.49□□□□□ -2.17
MDC1-208ENST00000494654 KRTAP2-2Q9BYT5 123 aa1.49□□□□□ -2.17
MDC1-208ENST00000494654 NBDYA0A0U1RRE5 68 aa1.48□□□□□ -2.17
MDC1-208ENST00000494654 SPINK1P00995 79 aa1.48□□□□□ -2.17
MDC1-208ENST00000494654 TPRXLQ17RH7 258 aa1.48□□□□□ -2.17
MDC1-208ENST00000494654 KMT2AQ03164 3969 aa1.47□□□□□ -2.17
MDC1-208ENST00000494654 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
MDC1-208ENST00000494654 CIRBP-AS1Q8TBR5 109 aa1.47□□□□□ -2.17
MDC1-208ENST00000494654 CRIPTQ9P021 101 aa1.47□□□□□ -2.17
MDC1-208ENST00000494654 Q6ZRN7 208 aaPredicted RBP1.46□□□□□ -2.18
MDC1-208ENST00000494654 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
MDC1-208ENST00000494654 TNXBP22105 4242 aa1.45□□□□□ -2.18
MDC1-208ENST00000494654 HERC1Q15751 4861 aa1.45□□□□□ -2.18
MDC1-208ENST00000494654 HSPG2P98160 4391 aa1.45□□□□□ -2.18
MDC1-208ENST00000494654 DYNC1H1Q14204 4646 aaKnown RBP1.45□□□□□ -2.18
MDC1-208ENST00000494654 VPS13BQ7Z7G8 4022 aa1.45□□□□□ -2.18
MDC1-208ENST00000494654 MYCBP2O75592 4640 aa1.45□□□□□ -2.18
MDC1-208ENST00000494654 APOBP04114 4563 aaKnown RBP1.45□□□□□ -2.18
MDC1-208ENST00000494654 SEC61BP60468 96 aaKnown RBP1.44□□□□□ -2.18
MDC1-208ENST00000494654 RPS29P62273 56 aaKnown RBP1.44□□□□□ -2.18
MDC1-208ENST00000494654 APLNQ9ULZ1 77 aa1.44□□□□□ -2.18
MDC1-208ENST00000494654 FAT2Q9NYQ8 4349 aa1.44□□□□□ -2.18
MDC1-208ENST00000494654 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
MDC1-208ENST00000494654 KRTAP13-2Q52LG2 175 aa1.43□□□□□ -2.18
MDC1-208ENST00000494654 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
MDC1-208ENST00000494654 PKD1P98161 4303 aa1.42□□□□□ -2.18
MDC1-208ENST00000494654 A0A1B0GVY2 172 aa1.41□□□□□ -2.18
MDC1-208ENST00000494654 KRTAP10-6P60371 365 aaPredicted RBP1.41□□□□□ -2.18
MDC1-208ENST00000494654 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
MDC1-208ENST00000494654 S4R3F8 94 aa1.41□□□□□ -2.18
MDC1-208ENST00000494654 LRP1Q07954 4544 aaKnown RBP1.4□□□□□ -2.18
MDC1-208ENST00000494654 SMR3BP02814 79 aaPredicted RBP1.4□□□□□ -2.19
MDC1-208ENST00000494654 DMBT1Q9UGM3 2413 aaPredicted RBP1.4□□□□□ -2.19
MDC1-208ENST00000494654 FAT1Q14517 4588 aa1.4□□□□□ -2.19
MDC1-208ENST00000494654 KRTAP1-4P0C5Y4 121 aa1.39□□□□□ -2.19
MDC1-208ENST00000494654 FAT3Q8TDW7 4589 aa1.39□□□□□ -2.19
MDC1-208ENST00000494654 SRRM2Q9UQ35 2752 aaKnown RBP1.39□□□□□ -2.19
MDC1-208ENST00000494654 FLG2Q5D862 2391 aaPredicted RBP1.39□□□□□ -2.19
MDC1-208ENST00000494654 RNF213Q63HN8 5207 aa1.38□□□□□ -2.19
MDC1-208ENST00000494654 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
MDC1-208ENST00000494654 KRTAP12-2P59991 146 aa1.38□□□□□ -2.19
MDC1-208ENST00000494654 A0A0D9SG42 100 aa1.37□□□□□ -2.19
MDC1-208ENST00000494654 Q5VSD8 79 aa1.37□□□□□ -2.19
MDC1-208ENST00000494654 CAMK2N1Q7Z7J9 78 aa1.37□□□□□ -2.19
MDC1-208ENST00000494654 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
MDC1-208ENST00000494654 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
MDC1-208ENST00000494654 PLAC4Q8WY50 150 aa1.36□□□□□ -2.19
MDC1-208ENST00000494654 FLGP20930 4061 aaPredicted RBP1.36□□□□□ -2.19
MDC1-208ENST00000494654 KRTAP10-7P60409 375 aaPredicted RBP1.35□□□□□ -2.19
MDC1-208ENST00000494654 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
MDC1-208ENST00000494654 M0QZ58 72 aa1.34□□□□□ -2.19
MDC1-208ENST00000494654 C9orf92A6NGG3 77 aa1.33□□□□□ -2.2
MDC1-208ENST00000494654 PP632Q6XCG6 107 aa1.33□□□□□ -2.2
MDC1-208ENST00000494654 PRO2289Q9P1D8 64 aa1.33□□□□□ -2.2
MDC1-208ENST00000494654 FSIP2Q5CZC0 6907 aa1.32□□□□□ -2.2
MDC1-208ENST00000494654 HMCN2Q8NDA2 5059 aa1.32□□□□□ -2.2
MDC1-208ENST00000494654 SPRR5A0A1B0GTR4 108 aa1.31□□□□□ -2.2
MDC1-208ENST00000494654 KRTAP10-1P60331 282 aa1.31□□□□□ -2.2
MDC1-208ENST00000494654 INE1O15225 51 aa1.29□□□□□ -2.2
MDC1-208ENST00000494654 MUC2Q02817 5179 aa1.28□□□□□ -2.2
MDC1-208ENST00000494654 KRTAP10-12P60413 245 aa1.28□□□□□ -2.2
MDC1-208ENST00000494654 LRP2P98164 4655 aa1.27□□□□□ -2.21
MDC1-208ENST00000494654 MT3P25713 68 aa1.27□□□□□ -2.21
MDC1-208ENST00000494654 LCE3CQ5T5A8 94 aa1.27□□□□□ -2.21
MDC1-208ENST00000494654 MUC17Q685J3 4493 aa1.26□□□□□ -2.21
MDC1-208ENST00000494654 KRTAP10-5P60370 271 aa1.26□□□□□ -2.21
MDC1-208ENST00000494654 KRTAP10-8P60410 259 aa1.26□□□□□ -2.21
MDC1-208ENST00000494654 LCE1EQ5T753 118 aa1.26□□□□□ -2.21
MDC1-208ENST00000494654 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
MDC1-208ENST00000494654 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
MDC1-208ENST00000494654 LPAP08519 4548 aa1.25□□□□□ -2.21
MDC1-208ENST00000494654 MT1HL1P0DM35 61 aa1.24□□□□□ -2.21
MDC1-208ENST00000494654 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
MDC1-208ENST00000494654 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
MDC1-208ENST00000494654 R4GN34 69 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms