RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MGPP08493 103 aa1.27□□□□□ -2.21
GTF3A-208ENST00000493903 AMELXQ99217 191 aa1.27□□□□□ -2.21
GTF3A-208ENST00000493903 UQCR10Q9UDW1 63 aa1.27□□□□□ -2.21
GTF3A-208ENST00000493903 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
GTF3A-208ENST00000493903 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
GTF3A-208ENST00000493903 Q5BKY6 102 aa1.26□□□□□ -2.21
GTF3A-208ENST00000493903 RPL39LQ96EH5 51 aaKnown RBP1.26□□□□□ -2.21
GTF3A-208ENST00000493903 PRR15LQ9BU68 103 aa1.26□□□□□ -2.21
GTF3A-208ENST00000493903 CDC42SE2Q9NRR3 84 aa1.26□□□□□ -2.21
GTF3A-208ENST00000493903 C6orf48Q9UBA6 75 aa1.26□□□□□ -2.21
GTF3A-208ENST00000493903 CTXND1A0A1B0GTU2 59 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 CHKB-CPT1BH3BT56 60 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 BCE1O60756 84 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 SERF2P84101 59 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 Q6ZRX8 168 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 FAM213BQ8TBF2 198 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 CNFNQ9BYD5 112 aa1.25□□□□□ -2.21
GTF3A-208ENST00000493903 NDUFA1O15239 70 aa1.24□□□□□ -2.21
GTF3A-208ENST00000493903 COX6CP09669 75 aa1.24□□□□□ -2.21
GTF3A-208ENST00000493903 BAGE2Q86Y30 109 aa1.24□□□□□ -2.21
GTF3A-208ENST00000493903 UBE2D4Q9Y2X8 147 aa1.24□□□□□ -2.21
GTF3A-208ENST00000493903 TRAV22A0A0B4J277 110 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 A0A0D9SG42 100 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 hADV29S1A0JD25 119 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 F8VRH5 84 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 I3L3M4 83 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
GTF3A-208ENST00000493903 TMEM170BQ5T4T1 132 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 MANBALQ9NQG1 85 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 PRO1854Q9UHT4 67 aa1.23□□□□□ -2.21
GTF3A-208ENST00000493903 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
GTF3A-208ENST00000493903 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
GTF3A-208ENST00000493903 M0R2T5 61 aa1.22□□□□□ -2.21
GTF3A-208ENST00000493903 UQCR11O14957 56 aa1.22□□□□□ -2.21
GTF3A-208ENST00000493903 MT-ATP8P03928 68 aa1.22□□□□□ -2.21
GTF3A-208ENST00000493903 C10orf95Q9H7T3 257 aa1.22□□□□□ -2.21
GTF3A-208ENST00000493903 NDUFC1O43677 76 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 APOC3P02656 99 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 SEC11AP67812 179 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 PRLHP81277 87 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 COX17Q14061 63 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 ST20Q9HBF5 79 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 LINC01558Q9Y6Z2 57 aa1.21□□□□□ -2.22
GTF3A-208ENST00000493903 SPINK1P00995 79 aa1.2□□□□□ -2.22
GTF3A-208ENST00000493903 MT2AP02795 61 aa1.2□□□□□ -2.22
GTF3A-208ENST00000493903 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
GTF3A-208ENST00000493903 RPL39P62891 51 aaKnown RBP1.2□□□□□ -2.22
GTF3A-208ENST00000493903 SPRR4Q96PI1 79 aa1.2□□□□□ -2.22
GTF3A-208ENST00000493903 FXYD6-FXYD2A0A087WZ82 144 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 MT1FP04733 61 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 FCER1GP30273 86 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 KRTAP19-6Q3LI70 58 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 ALKAL2Q6UX46 152 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 Q8IZM0 81 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 VAMP8Q9BV40 100 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 NXT2Q9NPJ8 142 aaKnown RBP1.19□□□□□ -2.22
GTF3A-208ENST00000493903 GNG13Q9P2W3 67 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 KMT2DO14686 5537 aa1.19□□□□□ -2.22
GTF3A-208ENST00000493903 UMAD1C9J7I0 102 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 ATOX1O00244 68 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 KRTAP20-1Q3LI63 56 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 COX6B2Q6YFQ2 88 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 PMCHL2Q9BQD1 86 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 C20orf78Q9BR46 151 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 SMIM2Q9BVW6 85 aa1.18□□□□□ -2.22
GTF3A-208ENST00000493903 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
GTF3A-208ENST00000493903 A0A1B0GUT8 65 aa1.17□□□□□ -2.22
GTF3A-208ENST00000493903 K7EP34 96 aa1.17□□□□□ -2.22
GTF3A-208ENST00000493903 SPRR1AP35321 89 aa1.17□□□□□ -2.22
GTF3A-208ENST00000493903 S100ZQ8WXG8 99 aa1.17□□□□□ -2.22
GTF3A-208ENST00000493903 TOMM7Q9P0U1 55 aa1.17□□□□□ -2.22
GTF3A-208ENST00000493903 C9orf92A6NGG3 77 aa1.16□□□□□ -2.22
GTF3A-208ENST00000493903 IGIPA6NJ69 53 aa1.16□□□□□ -2.22
GTF3A-208ENST00000493903 IFI27P40305 119 aaPredicted RBP1.16□□□□□ -2.22
GTF3A-208ENST00000493903 PEA15Q15121 130 aa1.16□□□□□ -2.22
GTF3A-208ENST00000493903 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
GTF3A-208ENST00000493903 CDKN2A-AS1Q9UH64 79 aa1.16□□□□□ -2.22
GTF3A-208ENST00000493903 D6R8Y8 96 aa1.15□□□□□ -2.23
GTF3A-208ENST00000493903 SMCO4Q9NRQ5 59 aa1.15□□□□□ -2.23
GTF3A-208ENST00000493903 SMIM27A0A1W2PRY6 76 aa1.14□□□□□ -2.23
GTF3A-208ENST00000493903 KCNQ1DNQ9H478 68 aa1.14□□□□□ -2.23
GTF3A-208ENST00000493903 LINC00472Q9H8W2 130 aa1.14□□□□□ -2.23
GTF3A-208ENST00000493903 TRBV7-7A0A0K0K1E9 115 aa1.13□□□□□ -2.23
GTF3A-208ENST00000493903 KANTRA0A1W2PQU2 76 aa1.13□□□□□ -2.23
GTF3A-208ENST00000493903 IGLC3P0DOY3 106 aa1.13□□□□□ -2.23
GTF3A-208ENST00000493903 SERP2Q8N6R1 65 aa1.13□□□□□ -2.23
GTF3A-208ENST00000493903 LINC00846Q9NV44 126 aa1.13□□□□□ -2.23
GTF3A-208ENST00000493903 ETDCA0A1B0GVM5 59 aa1.12□□□□□ -2.23
GTF3A-208ENST00000493903 BVES-AS1Q5T3Y7 98 aa1.12□□□□□ -2.23
GTF3A-208ENST00000493903 K7EMI3 77 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 SPRR1BP22528 89 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 ETDBQ3ZM63 59 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 SFTA2Q6UW10 78 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 HIGD1BQ9P298 99 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
GTF3A-208ENST00000493903 LINC01546A6NGU7 62 aa1.1□□□□□ -2.23
GTF3A-208ENST00000493903 H7BZZ5 65 aa1.1□□□□□ -2.23
GTF3A-208ENST00000493903 SPINK7P58062 85 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms