RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 LORP23490 312 aaPredicted RBP3.9□□□□□ -1.78
FNDC3A-204ENST00000492622 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.78
FNDC3A-204ENST00000492622 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
FNDC3A-204ENST00000492622 DNHD1Q96M86 4753 aa3.86□□□□□ -1.79
FNDC3A-204ENST00000492622 FAT1Q14517 4588 aa3.82□□□□□ -1.8
FNDC3A-204ENST00000492622 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
FNDC3A-204ENST00000492622 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
FNDC3A-204ENST00000492622 STARD9Q9P2P6 4700 aa3.78□□□□□ -1.8
FNDC3A-204ENST00000492622 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
FNDC3A-204ENST00000492622 LYSTQ99698 3801 aa3.77□□□□□ -1.81
FNDC3A-204ENST00000492622 KMT2AQ03164 3969 aa3.76□□□□□ -1.81
FNDC3A-204ENST00000492622 DNAH2Q9P225 4427 aa3.76□□□□□ -1.81
FNDC3A-204ENST00000492622 ANK2Q01484 3957 aa3.75□□□□□ -1.81
FNDC3A-204ENST00000492622 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
FNDC3A-204ENST00000492622 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
FNDC3A-204ENST00000492622 DNAH3Q8TD57 4116 aa3.72□□□□□ -1.81
FNDC3A-204ENST00000492622 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
FNDC3A-204ENST00000492622 DNAH17Q9UFH2 4485 aa3.72□□□□□ -1.81
FNDC3A-204ENST00000492622 LRP1BQ9NZR2 4599 aa3.71□□□□□ -1.82
FNDC3A-204ENST00000492622 PRKDCP78527 4128 aaKnown RBP3.71□□□□□ -1.82
FNDC3A-204ENST00000492622 VPS13DQ5THJ4 4388 aa3.71□□□□□ -1.82
FNDC3A-204ENST00000492622 MYCBP2O75592 4640 aa3.7□□□□□ -1.82
FNDC3A-204ENST00000492622 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
FNDC3A-204ENST00000492622 DYNC1H1Q14204 4646 aaKnown RBP3.68□□□□□ -1.82
FNDC3A-204ENST00000492622 VPS13BQ7Z7G8 4022 aa3.67□□□□□ -1.82
FNDC3A-204ENST00000492622 RYR1P21817 5038 aa3.67□□□□□ -1.82
FNDC3A-204ENST00000492622 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
FNDC3A-204ENST00000492622 CMYA5Q8N3K9 4069 aa3.66□□□□□ -1.82
FNDC3A-204ENST00000492622 SACSQ9NZJ4 4579 aa3.64□□□□□ -1.83
FNDC3A-204ENST00000492622 DNAH7Q8WXX0 4024 aa3.63□□□□□ -1.83
FNDC3A-204ENST00000492622 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
FNDC3A-204ENST00000492622 DNAH6Q9C0G6 4158 aa3.58□□□□□ -1.84
FNDC3A-204ENST00000492622 APOBP04114 4563 aaKnown RBP3.58□□□□□ -1.84
FNDC3A-204ENST00000492622 HECTD4Q9Y4D8 3996 aa3.56□□□□□ -1.84
FNDC3A-204ENST00000492622 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
FNDC3A-204ENST00000492622 LRP1Q07954 4544 aaKnown RBP3.55□□□□□ -1.84
FNDC3A-204ENST00000492622 DYNC2H1Q8NCM8 4307 aaKnown RBP3.54□□□□□ -1.84
FNDC3A-204ENST00000492622 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
FNDC3A-204ENST00000492622 INE1O15225 51 aa3.5□□□□□ -1.85
FNDC3A-204ENST00000492622 KIAA1109Q2LD37 5005 aa3.49□□□□□ -1.85
FNDC3A-204ENST00000492622 MT1HP80294 61 aa3.47□□□□□ -1.85
FNDC3A-204ENST00000492622 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
FNDC3A-204ENST00000492622 MT2AP02795 61 aa3.44□□□□□ -1.86
FNDC3A-204ENST00000492622 RYR3Q15413 4870 aa3.43□□□□□ -1.86
FNDC3A-204ENST00000492622 MT1FP04733 61 aa3.43□□□□□ -1.86
FNDC3A-204ENST00000492622 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
FNDC3A-204ENST00000492622 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.86
FNDC3A-204ENST00000492622 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.86
FNDC3A-204ENST00000492622 PKHD1P08F94 4074 aa3.39□□□□□ -1.87
FNDC3A-204ENST00000492622 LRP2P98164 4655 aa3.39□□□□□ -1.87
FNDC3A-204ENST00000492622 LPAP08519 4548 aa3.35□□□□□ -1.87
FNDC3A-204ENST00000492622 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
FNDC3A-204ENST00000492622 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.88
FNDC3A-204ENST00000492622 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
FNDC3A-204ENST00000492622 KRTAP19-1Q8IUB9 90 aa3.25□□□□□ -1.89
FNDC3A-204ENST00000492622 PKD1P98161 4303 aa3.25□□□□□ -1.89
FNDC3A-204ENST00000492622 HSPG2P98160 4391 aa3.24□□□□□ -1.89
FNDC3A-204ENST00000492622 KMT2CQ8NEZ4 4911 aaKnown RBP3.22□□□□□ -1.89
FNDC3A-204ENST00000492622 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
FNDC3A-204ENST00000492622 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
FNDC3A-204ENST00000492622 HERC2O95714 4834 aa3.21□□□□□ -1.9
FNDC3A-204ENST00000492622 RYR2Q92736 4967 aa3.19□□□□□ -1.9
FNDC3A-204ENST00000492622 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
FNDC3A-204ENST00000492622 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
FNDC3A-204ENST00000492622 MT1XP80297 61 aa3.15□□□□□ -1.9
FNDC3A-204ENST00000492622 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
FNDC3A-204ENST00000492622 TNXBP22105 4242 aa3.13□□□□□ -1.91
FNDC3A-204ENST00000492622 MT1BP07438 61 aa3.11□□□□□ -1.91
FNDC3A-204ENST00000492622 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
FNDC3A-204ENST00000492622 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
FNDC3A-204ENST00000492622 LCE2CQ5TA81 110 aa3.08□□□□□ -1.92
FNDC3A-204ENST00000492622 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
FNDC3A-204ENST00000492622 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
FNDC3A-204ENST00000492622 PCLOQ9Y6V0 5065 aa3.07□□□□□ -1.92
FNDC3A-204ENST00000492622 MT1GP13640 62 aa3.07□□□□□ -1.92
FNDC3A-204ENST00000492622 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
FNDC3A-204ENST00000492622 EPPK1P58107 5090 aaKnown RBP3.03□□□□□ -1.92
FNDC3A-204ENST00000492622 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
FNDC3A-204ENST00000492622 KRTAP9-3Q9BYQ3 159 aa2.99□□□□□ -1.93
FNDC3A-204ENST00000492622 HERC1Q15751 4861 aa2.98□□□□□ -1.93
FNDC3A-204ENST00000492622 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
FNDC3A-204ENST00000492622 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
FNDC3A-204ENST00000492622 UBR4Q5T4S7 5183 aa2.95□□□□□ -1.94
FNDC3A-204ENST00000492622 SPRR2EP22531 72 aa2.94□□□□□ -1.94
FNDC3A-204ENST00000492622 SPRR2BP35325 72 aa2.94□□□□□ -1.94
FNDC3A-204ENST00000492622 SPRR2AP35326 72 aa2.94□□□□□ -1.94
FNDC3A-204ENST00000492622 MUC2Q02817 5179 aa2.94□□□□□ -1.94
FNDC3A-204ENST00000492622 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
FNDC3A-204ENST00000492622 LCE2BO14633 110 aa2.93□□□□□ -1.94
FNDC3A-204ENST00000492622 ABCA13Q86UQ4 5058 aa2.93□□□□□ -1.94
FNDC3A-204ENST00000492622 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
FNDC3A-204ENST00000492622 MUC17Q685J3 4493 aa2.92□□□□□ -1.94
FNDC3A-204ENST00000492622 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
FNDC3A-204ENST00000492622 FAT4Q6V0I7 4981 aa2.86□□□□□ -1.95
FNDC3A-204ENST00000492622 LOC100996750A0A140TA64 210 aa2.86□□□□□ -1.95
FNDC3A-204ENST00000492622 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
FNDC3A-204ENST00000492622 HMCN2Q8NDA2 5059 aa2.85□□□□□ -1.95
FNDC3A-204ENST00000492622 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
FNDC3A-204ENST00000492622 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
FNDC3A-204ENST00000492622 MT1LQ93083 61 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms