RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 TRBV27A0A0K0K1C4 114 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 MYMXA0A1B0GTQ4 84 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 A0A1B0GV72 72 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 H3BMG7 143 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 H3BT86 120 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 I3L3M4 83 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 K7EP34 96 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 TAX1BP3O14907 124 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 SNCGO76070 127 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 NCR2O95944 276 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 ACYP1P07311 99 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 IFITM1P13164 125 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 SCGB3A1Q96QR1 104 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 SMIM2Q9BVW6 85 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 SPCS1Q9Y6A9 102 aa1.21□□□□□ -2.22
UBR4-215ENST00000492606 TIMM17BO60830 172 aa1.2□□□□□ -2.22
UBR4-215ENST00000492606 POLR2KP53803 58 aaKnown RBP1.2□□□□□ -2.22
UBR4-215ENST00000492606 LCA10Q71F78 164 aa1.2□□□□□ -2.22
UBR4-215ENST00000492606 ATOH7Q8N100 152 aa1.2□□□□□ -2.22
UBR4-215ENST00000492606 PRO1854Q9UHT4 67 aa1.2□□□□□ -2.22
UBR4-215ENST00000492606 IGIPA6NJ69 53 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 H3BUT2 72 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 MRPS36P82909 103 aaKnown RBP1.19□□□□□ -2.22
UBR4-215ENST00000492606 H1FX-AS1Q4G0G2 97 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 TEN1Q86WV5 123 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 PPDPFLQ8WWR9 84 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 MT1LQ93083 61 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 RAB37Q96AX2 223 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 ERG28Q9UKR5 140 aa1.19□□□□□ -2.22
UBR4-215ENST00000492606 TRAV13-2A0A0B4J235 113 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 A0A1B0GX51 115 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 ZNF815PA8K554 130 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 H0YGX0 51 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 J3QQQ9 107 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 ATXN8Q156A1 80 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 TMEM170BQ5T4T1 132 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 AMELXQ99217 191 aa1.18□□□□□ -2.22
UBR4-215ENST00000492606 NHP2Q9NX24 153 aaKnown RBP1.18□□□□□ -2.22
UBR4-215ENST00000492606 A0A087WSZ3 146 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 TRBV10-2A0A0K0K1G8 114 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 SPRR1AP35321 89 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 FXYD2P54710 66 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 COX17Q14061 63 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 MEIG1Q5JSS6 88 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 S100A7L2Q5SY68 101 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 ANKRD29Q8N6D5 301 aa1.17□□□□□ -2.22
UBR4-215ENST00000492606 JMJD7-PLA2G4BH0Y9G9 81 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 TRACP01848 142 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 SPINK8P0C7L1 97 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 PDE6GP18545 87 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 SPINK7P58062 85 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 CKS1BP61024 79 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 ETDBQ3ZM63 59 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 KTN1-AS1Q86SY8 53 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 MUSTN1Q8IVN3 82 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 TOMM7Q9P0U1 55 aa1.16□□□□□ -2.22
UBR4-215ENST00000492606 TRBV10-3A0A0K0K1G6 114 aa1.15□□□□□ -2.23
UBR4-215ENST00000492606 TMEM256-PLSCR3K7ERE1 68 aa1.15□□□□□ -2.23
UBR4-215ENST00000492606 NDUFC2O95298 119 aa1.15□□□□□ -2.23
UBR4-215ENST00000492606 DNAL4O96015 105 aa1.15□□□□□ -2.23
UBR4-215ENST00000492606 RPS28P62857 69 aaKnown RBP1.15□□□□□ -2.23
UBR4-215ENST00000492606 RPL39P62891 51 aaKnown RBP1.15□□□□□ -2.23
UBR4-215ENST00000492606 LINC00643Q86TS7 51 aa1.15□□□□□ -2.23
UBR4-215ENST00000492606 SMIM20Q8N5G0 67 aa1.15□□□□□ -2.23
UBR4-215ENST00000492606 TRBV7-6A0A0J9YX20 115 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 TRBV7-7A0A0K0K1E9 115 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 ETDCA0A1B0GVM5 59 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 C9JAW5 83 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 TCL1BO95988 128 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 BAALC-AS2P0C853 105 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 ATP5EP2Q5VTU8 51 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 Q8IZM0 81 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 LINC00308Q8TCZ7 52 aa1.14□□□□□ -2.23
UBR4-215ENST00000492606 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 K7ERJ3 54 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 ATOX1O00244 68 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 UQCRQO14949 82 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 NDUFC1O43677 76 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 TMEM258P61165 79 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 HIST1H4AP62805 103 aaKnown RBP1.13□□□□□ -2.23
UBR4-215ENST00000492606 PRR15Q8IV56 129 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 COX7B2Q8TF08 81 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 UBL5Q9BZL1 73 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 CDKN2A-AS1Q9UH64 79 aa1.13□□□□□ -2.23
UBR4-215ENST00000492606 TEX49A0A1B0GTD5 131 aa1.12□□□□□ -2.23
UBR4-215ENST00000492606 hADV29S1A0JD25 119 aa1.12□□□□□ -2.23
UBR4-215ENST00000492606 CCKP06307 115 aa1.12□□□□□ -2.23
UBR4-215ENST00000492606 LINC00158P58513 81 aa1.12□□□□□ -2.23
UBR4-215ENST00000492606 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
UBR4-215ENST00000492606 NAA38Q9BRA0 125 aaKnown RBP1.12□□□□□ -2.23
UBR4-215ENST00000492606 ORMDL1Q9P0S3 153 aa1.12□□□□□ -2.23
UBR4-215ENST00000492606 LOC110117498A0A087WWA1 95 aa1.11□□□□□ -2.23
UBR4-215ENST00000492606 MT-ATP8P03928 68 aa1.11□□□□□ -2.23
UBR4-215ENST00000492606 COX7CP15954 63 aa1.11□□□□□ -2.23
UBR4-215ENST00000492606 ATP5EP56381 51 aaPredicted RBP1.11□□□□□ -2.23
UBR4-215ENST00000492606 Q6JHZ5 121 aa1.11□□□□□ -2.23
UBR4-215ENST00000492606 C7orf65Q6ZTY9 151 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms