RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 A0A0D9SG42 100 aa7.62□□□□□ -1.19
PABPC4-216ENST00000492468 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
PABPC4-216ENST00000492468 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
PABPC4-216ENST00000492468 SMR3BP02814 79 aaPredicted RBP7.56□□□□□ -1.2
PABPC4-216ENST00000492468 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
PABPC4-216ENST00000492468 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
PABPC4-216ENST00000492468 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.2
PABPC4-216ENST00000492468 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
PABPC4-216ENST00000492468 S4R3F8 94 aa7.5□□□□□ -1.21
PABPC4-216ENST00000492468 FAT1Q14517 4588 aa7.5□□□□□ -1.21
PABPC4-216ENST00000492468 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
PABPC4-216ENST00000492468 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
PABPC4-216ENST00000492468 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
PABPC4-216ENST00000492468 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
PABPC4-216ENST00000492468 LRP1Q07954 4544 aaKnown RBP7.42□□□□□ -1.22
PABPC4-216ENST00000492468 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
PABPC4-216ENST00000492468 TNXBP22105 4242 aa7.38□□□□□ -1.23
PABPC4-216ENST00000492468 XP32Q5T750 250 aa7.37□□□□□ -1.23
PABPC4-216ENST00000492468 HSPG2P98160 4391 aa7.37□□□□□ -1.23
PABPC4-216ENST00000492468 A0A1B0GVY2 172 aa7.34□□□□□ -1.23
PABPC4-216ENST00000492468 M0QZ58 72 aa7.25□□□□□ -1.25
PABPC4-216ENST00000492468 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
PABPC4-216ENST00000492468 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
PABPC4-216ENST00000492468 RYR2Q92736 4967 aa7.12□□□□□ -1.27
PABPC4-216ENST00000492468 RYR3Q15413 4870 aa7.05□□□□□ -1.28
PABPC4-216ENST00000492468 Q5VSD8 79 aa7.02□□□□□ -1.29
PABPC4-216ENST00000492468 LPAP08519 4548 aa7.01□□□□□ -1.29
PABPC4-216ENST00000492468 J3QL48 77 aa7□□□□□ -1.29
PABPC4-216ENST00000492468 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
PABPC4-216ENST00000492468 A0A0A0MQY5 61 aa6.98□□□□□ -1.29
PABPC4-216ENST00000492468 R4GN34 69 aa6.96□□□□□ -1.3
PABPC4-216ENST00000492468 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
PABPC4-216ENST00000492468 LRP2P98164 4655 aa6.91□□□□□ -1.3
PABPC4-216ENST00000492468 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
PABPC4-216ENST00000492468 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
PABPC4-216ENST00000492468 RYR1P21817 5038 aa6.82□□□□□ -1.32
PABPC4-216ENST00000492468 LUZP6Q538Z0 58 aa6.81□□□□□ -1.32
PABPC4-216ENST00000492468 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
PABPC4-216ENST00000492468 EPPK1P58107 5090 aaKnown RBP6.8□□□□□ -1.32
PABPC4-216ENST00000492468 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
PABPC4-216ENST00000492468 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
PABPC4-216ENST00000492468 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
PABPC4-216ENST00000492468 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
PABPC4-216ENST00000492468 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
PABPC4-216ENST00000492468 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
PABPC4-216ENST00000492468 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
PABPC4-216ENST00000492468 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
PABPC4-216ENST00000492468 ABCA13Q86UQ4 5058 aa6.51□□□□□ -1.37
PABPC4-216ENST00000492468 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
PABPC4-216ENST00000492468 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
PABPC4-216ENST00000492468 HERC2O95714 4834 aa6.5□□□□□ -1.37
PABPC4-216ENST00000492468 TNP1P09430 55 aa6.46□□□□□ -1.37
PABPC4-216ENST00000492468 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
PABPC4-216ENST00000492468 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
PABPC4-216ENST00000492468 HERC1Q15751 4861 aa6.31□□□□□ -1.4
PABPC4-216ENST00000492468 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
PABPC4-216ENST00000492468 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
PABPC4-216ENST00000492468 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
PABPC4-216ENST00000492468 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
PABPC4-216ENST00000492468 MUC2Q02817 5179 aa6.08□□□□□ -1.44
PABPC4-216ENST00000492468 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
PABPC4-216ENST00000492468 INE1O15225 51 aa6□□□□□ -1.45
PABPC4-216ENST00000492468 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
PABPC4-216ENST00000492468 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
PABPC4-216ENST00000492468 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
PABPC4-216ENST00000492468 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
PABPC4-216ENST00000492468 MT1FP04733 61 aa5.79□□□□□ -1.48
PABPC4-216ENST00000492468 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
PABPC4-216ENST00000492468 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
PABPC4-216ENST00000492468 MT2AP02795 61 aa5.78□□□□□ -1.48
PABPC4-216ENST00000492468 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
PABPC4-216ENST00000492468 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
PABPC4-216ENST00000492468 M0R2T5 61 aa5.76□□□□□ -1.49
PABPC4-216ENST00000492468 MT1HP80294 61 aa5.76□□□□□ -1.49
PABPC4-216ENST00000492468 MT1XP80297 61 aa5.74□□□□□ -1.49
PABPC4-216ENST00000492468 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
PABPC4-216ENST00000492468 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
PABPC4-216ENST00000492468 MT1BP07438 61 aa5.7□□□□□ -1.5
PABPC4-216ENST00000492468 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
PABPC4-216ENST00000492468 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
PABPC4-216ENST00000492468 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
PABPC4-216ENST00000492468 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
PABPC4-216ENST00000492468 LCE2BO14633 110 aa5.47□□□□□ -1.53
PABPC4-216ENST00000492468 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
PABPC4-216ENST00000492468 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
PABPC4-216ENST00000492468 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.56
PABPC4-216ENST00000492468 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
PABPC4-216ENST00000492468 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
PABPC4-216ENST00000492468 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
PABPC4-216ENST00000492468 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
PABPC4-216ENST00000492468 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
PABPC4-216ENST00000492468 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
PABPC4-216ENST00000492468 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
PABPC4-216ENST00000492468 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
PABPC4-216ENST00000492468 KMT2DO14686 5537 aa5.1□□□□□ -1.59
PABPC4-216ENST00000492468 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
PABPC4-216ENST00000492468 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
PABPC4-216ENST00000492468 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
PABPC4-216ENST00000492468 MT1LQ93083 61 aa5□□□□□ -1.61
PABPC4-216ENST00000492468 USH2AO75445 5202 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 315 ms