RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 TENM4Q6N022 2769 aa2.29□□□□□ -2.04
SHTN1-205ENST00000490615 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
SHTN1-205ENST00000490615 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
SHTN1-205ENST00000490615 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
SHTN1-205ENST00000490615 MAST4O15021 2626 aa2.28□□□□□ -2.04
SHTN1-205ENST00000490615 VPS13CQ709C8 3753 aa2.28□□□□□ -2.05
SHTN1-205ENST00000490615 ATRQ13535 2644 aa2.27□□□□□ -2.05
SHTN1-205ENST00000490615 TENM3Q9P273 2699 aa2.27□□□□□ -2.05
SHTN1-205ENST00000490615 HELZ2Q9BYK8 2649 aaKnown RBP2.27□□□□□ -2.05
SHTN1-205ENST00000490615 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
SHTN1-205ENST00000490615 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SHTN1-205ENST00000490615 MUC3AQ02505 3323 aa2.26□□□□□ -2.05
SHTN1-205ENST00000490615 USP24Q9UPU5 2620 aa2.26□□□□□ -2.05
SHTN1-205ENST00000490615 VWFP04275 2813 aa2.26□□□□□ -2.05
SHTN1-205ENST00000490615 FASNP49327 2511 aaKnown RBP2.25□□□□□ -2.05
SHTN1-205ENST00000490615 SRRM2Q9UQ35 2752 aaKnown RBP2.24□□□□□ -2.05
SHTN1-205ENST00000490615 NSD1Q96L73 2696 aaPredicted RBP2.24□□□□□ -2.05
SHTN1-205ENST00000490615 FLNBO75369 2602 aaKnown RBP2.23□□□□□ -2.05
SHTN1-205ENST00000490615 ANK3Q12955 4377 aaKnown RBP2.23□□□□□ -2.05
SHTN1-205ENST00000490615 FLG2Q5D862 2391 aaPredicted RBP2.23□□□□□ -2.05
SHTN1-205ENST00000490615 OTOGQ6ZRI0 2925 aa2.23□□□□□ -2.05
SHTN1-205ENST00000490615 DNAH1Q9P2D7 4330 aa2.22□□□□□ -2.05
SHTN1-205ENST00000490615 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
SHTN1-205ENST00000490615 TENM1Q9UKZ4 2725 aa2.21□□□□□ -2.06
SHTN1-205ENST00000490615 PKD1L1Q8TDX9 2849 aa2.2□□□□□ -2.06
SHTN1-205ENST00000490615 ITPR2Q14571 2701 aa2.19□□□□□ -2.06
SHTN1-205ENST00000490615 CSMD2Q7Z408 3487 aa2.19□□□□□ -2.06
SHTN1-205ENST00000490615 TGP01266 2768 aa2.19□□□□□ -2.06
SHTN1-205ENST00000490615 STAB2Q8WWQ8 2551 aa2.17□□□□□ -2.06
SHTN1-205ENST00000490615 CUBNO60494 3623 aa2.15□□□□□ -2.06
SHTN1-205ENST00000490615 NBEAL1Q6ZS30 2694 aa2.15□□□□□ -2.07
SHTN1-205ENST00000490615 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
SHTN1-205ENST00000490615 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SHTN1-205ENST00000490615 ZNF469Q96JG9 3925 aaPredicted RBP2.13□□□□□ -2.07
SHTN1-205ENST00000490615 SMR3BP02814 79 aaPredicted RBP2.13□□□□□ -2.07
SHTN1-205ENST00000490615 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
SHTN1-205ENST00000490615 NOTCH1P46531 2555 aa2.12□□□□□ -2.07
SHTN1-205ENST00000490615 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
SHTN1-205ENST00000490615 Q5VSD8 79 aa2.11□□□□□ -2.07
SHTN1-205ENST00000490615 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
SHTN1-205ENST00000490615 TNP1P09430 55 aa2.1□□□□□ -2.07
SHTN1-205ENST00000490615 COL6A5A8TX70 2615 aa2.1□□□□□ -2.07
SHTN1-205ENST00000490615 STAB1Q9NY15 2570 aa2.09□□□□□ -2.07
SHTN1-205ENST00000490615 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.07
SHTN1-205ENST00000490615 DYNC2H1Q8NCM8 4307 aaKnown RBP2.09□□□□□ -2.08
SHTN1-205ENST00000490615 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.08
SHTN1-205ENST00000490615 VPS13DQ5THJ4 4388 aa2.08□□□□□ -2.08
SHTN1-205ENST00000490615 MGAM2Q2M2H8 2515 aa2.08□□□□□ -2.08
SHTN1-205ENST00000490615 ANK2Q01484 3957 aa2.08□□□□□ -2.08
SHTN1-205ENST00000490615 TRRAPQ9Y4A5 3859 aa2.07□□□□□ -2.08
SHTN1-205ENST00000490615 DMBT1Q9UGM3 2413 aaPredicted RBP2.06□□□□□ -2.08
SHTN1-205ENST00000490615 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
SHTN1-205ENST00000490615 LYSTQ99698 3801 aa2.04□□□□□ -2.08
SHTN1-205ENST00000490615 DNAH17Q9UFH2 4485 aa2.03□□□□□ -2.08
SHTN1-205ENST00000490615 COL7A1Q02388 2944 aa2.03□□□□□ -2.08
SHTN1-205ENST00000490615 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
SHTN1-205ENST00000490615 DNAH9Q9NYC9 4486 aa2.01□□□□□ -2.09
SHTN1-205ENST00000490615 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
SHTN1-205ENST00000490615 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
SHTN1-205ENST00000490615 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
SHTN1-205ENST00000490615 CMYA5Q8N3K9 4069 aa2.01□□□□□ -2.09
SHTN1-205ENST00000490615 FBN3Q75N90 2809 aa2□□□□□ -2.09
SHTN1-205ENST00000490615 PRKDCP78527 4128 aaKnown RBP1.99□□□□□ -2.09
SHTN1-205ENST00000490615 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
SHTN1-205ENST00000490615 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
SHTN1-205ENST00000490615 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
SHTN1-205ENST00000490615 DNAH11Q96DT5 4516 aa1.98□□□□□ -2.09
SHTN1-205ENST00000490615 DNAH7Q8WXX0 4024 aa1.98□□□□□ -2.09
SHTN1-205ENST00000490615 DNAH6Q9C0G6 4158 aa1.96□□□□□ -2.1
SHTN1-205ENST00000490615 SACSQ9NZJ4 4579 aa1.96□□□□□ -2.1
SHTN1-205ENST00000490615 DNAH2Q9P225 4427 aa1.95□□□□□ -2.1
SHTN1-205ENST00000490615 CSMD3Q7Z407 3707 aa1.95□□□□□ -2.1
SHTN1-205ENST00000490615 PLECQ15149 4684 aaKnown RBP1.94□□□□□ -2.1
SHTN1-205ENST00000490615 MT1HL1P0DM35 61 aa1.94□□□□□ -2.1
SHTN1-205ENST00000490615 KRTAP21-3Q3LHN1 58 aa1.92□□□□□ -2.1
SHTN1-205ENST00000490615 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
SHTN1-205ENST00000490615 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.11
SHTN1-205ENST00000490615 LRP1BQ9NZR2 4599 aa1.9□□□□□ -2.11
SHTN1-205ENST00000490615 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
SHTN1-205ENST00000490615 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
SHTN1-205ENST00000490615 PKHD1L1Q86WI1 4243 aa1.88□□□□□ -2.11
SHTN1-205ENST00000490615 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
SHTN1-205ENST00000490615 VPS13BQ7Z7G8 4022 aa1.87□□□□□ -2.11
SHTN1-205ENST00000490615 DNAH5Q8TE73 4624 aa1.86□□□□□ -2.11
SHTN1-205ENST00000490615 PKD1P98161 4303 aa1.85□□□□□ -2.11
SHTN1-205ENST00000490615 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
SHTN1-205ENST00000490615 SPRR2GQ9BYE4 73 aa1.84□□□□□ -2.11
SHTN1-205ENST00000490615 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
SHTN1-205ENST00000490615 MYCBP2O75592 4640 aa1.81□□□□□ -2.12
SHTN1-205ENST00000490615 APOBP04114 4563 aaKnown RBP1.81□□□□□ -2.12
SHTN1-205ENST00000490615 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
SHTN1-205ENST00000490615 KRTAP19-2Q3LHN2 52 aa1.8□□□□□ -2.12
SHTN1-205ENST00000490615 FAT2Q9NYQ8 4349 aa1.79□□□□□ -2.12
SHTN1-205ENST00000490615 TNXBP22105 4242 aa1.78□□□□□ -2.12
SHTN1-205ENST00000490615 KRTAP4-1Q9BYQ7 146 aa1.78□□□□□ -2.12
SHTN1-205ENST00000490615 FAT3Q8TDW7 4589 aa1.77□□□□□ -2.13
SHTN1-205ENST00000490615 FAT1Q14517 4588 aa1.76□□□□□ -2.13
SHTN1-205ENST00000490615 DYNC1H1Q14204 4646 aaKnown RBP1.76□□□□□ -2.13
SHTN1-205ENST00000490615 HSPG2P98160 4391 aa1.73□□□□□ -2.13
SHTN1-205ENST00000490615 M0R2T5 61 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms