RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
SSR1-210ENST00000489567 MUC2Q02817 5179 aa4.3□□□□□ -1.72
SSR1-210ENST00000489567 Q96NJ1 140 aa4.28□□□□□ -1.72
SSR1-210ENST00000489567 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
SSR1-210ENST00000489567 NDUFB1O75438 58 aa4.26□□□□□ -1.73
SSR1-210ENST00000489567 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
SSR1-210ENST00000489567 PDE6GP18545 87 aa4.26□□□□□ -1.73
SSR1-210ENST00000489567 KRTAP4-1Q9BYQ7 146 aa4.26□□□□□ -1.73
SSR1-210ENST00000489567 A8MU10 97 aa4.25□□□□□ -1.73
SSR1-210ENST00000489567 BPY2O14599 106 aa4.25□□□□□ -1.73
SSR1-210ENST00000489567 Q8N9P0 234 aaPredicted RBP4.25□□□□□ -1.73
SSR1-210ENST00000489567 Q6ZQT0 140 aa4.24□□□□□ -1.73
SSR1-210ENST00000489567 PRR15LQ9BU68 103 aa4.24□□□□□ -1.73
SSR1-210ENST00000489567 DEFB116Q30KQ4 102 aa4.24□□□□□ -1.73
SSR1-210ENST00000489567 LOC110117498A0A087WWA1 95 aa4.23□□□□□ -1.73
SSR1-210ENST00000489567 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
SSR1-210ENST00000489567 LINC00472Q9H8W2 130 aa4.23□□□□□ -1.73
SSR1-210ENST00000489567 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
SSR1-210ENST00000489567 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
SSR1-210ENST00000489567 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
SSR1-210ENST00000489567 RPL37P61927 97 aaKnown RBP4.21□□□□□ -1.74
SSR1-210ENST00000489567 DSCR10P59022 87 aa4.19□□□□□ -1.74
SSR1-210ENST00000489567 ZCCHC13Q8WW36 166 aaKnown RBP4.19□□□□□ -1.74
SSR1-210ENST00000489567 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
SSR1-210ENST00000489567 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
SSR1-210ENST00000489567 LINC00208Q96KT6 92 aa4.17□□□□□ -1.74
SSR1-210ENST00000489567 C20orf166-AS1Q96NR2 134 aa4.16□□□□□ -1.74
SSR1-210ENST00000489567 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
SSR1-210ENST00000489567 ROMO1P60602 79 aa4.15□□□□□ -1.74
SSR1-210ENST00000489567 A8MUU9 505 aa4.15□□□□□ -1.75
SSR1-210ENST00000489567 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
SSR1-210ENST00000489567 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
SSR1-210ENST00000489567 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
SSR1-210ENST00000489567 A8MWP4 228 aa4.11□□□□□ -1.75
SSR1-210ENST00000489567 H3BPC8 53 aa4.11□□□□□ -1.75
SSR1-210ENST00000489567 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.76
SSR1-210ENST00000489567 K7EQZ3 153 aa4.08□□□□□ -1.76
SSR1-210ENST00000489567 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
SSR1-210ENST00000489567 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
SSR1-210ENST00000489567 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
SSR1-210ENST00000489567 MMP24-AS1A0A0U1RRL7 71 aa4.06□□□□□ -1.76
SSR1-210ENST00000489567 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
SSR1-210ENST00000489567 Q8N9L7 120 aa4.06□□□□□ -1.76
SSR1-210ENST00000489567 K7ERS5 55 aa4.05□□□□□ -1.76
SSR1-210ENST00000489567 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
SSR1-210ENST00000489567 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
SSR1-210ENST00000489567 H0Y9P7 68 aa4.05□□□□□ -1.76
SSR1-210ENST00000489567 MT1HP80294 61 aa4.03□□□□□ -1.76
SSR1-210ENST00000489567 SPINK7P58062 85 aa4.03□□□□□ -1.77
SSR1-210ENST00000489567 COA5Q86WW8 74 aa4.02□□□□□ -1.77
SSR1-210ENST00000489567 MRPL34Q9BQ48 92 aaKnown RBP4.02□□□□□ -1.77
SSR1-210ENST00000489567 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
SSR1-210ENST00000489567 HRES1P13985 223 aa4□□□□□ -1.77
SSR1-210ENST00000489567 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SSR1-210ENST00000489567 WFDC13Q8IUB5 93 aa4□□□□□ -1.77
SSR1-210ENST00000489567 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
SSR1-210ENST00000489567 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
SSR1-210ENST00000489567 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
SSR1-210ENST00000489567 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
SSR1-210ENST00000489567 Q5W150 140 aa3.96□□□□□ -1.77
SSR1-210ENST00000489567 UQCR11O14957 56 aa3.94□□□□□ -1.78
SSR1-210ENST00000489567 P0C880 135 aa3.94□□□□□ -1.78
SSR1-210ENST00000489567 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
SSR1-210ENST00000489567 M0R2T5 61 aa3.93□□□□□ -1.78
SSR1-210ENST00000489567 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
SSR1-210ENST00000489567 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
SSR1-210ENST00000489567 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
SSR1-210ENST00000489567 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
SSR1-210ENST00000489567 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
SSR1-210ENST00000489567 A0A1B0GU69 56 aa3.81□□□□□ -1.8
SSR1-210ENST00000489567 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
SSR1-210ENST00000489567 MT2AP02795 61 aa3.79□□□□□ -1.8
SSR1-210ENST00000489567 MT1FP04733 61 aa3.77□□□□□ -1.81
SSR1-210ENST00000489567 SPINT4Q6UDR6 99 aa3.77□□□□□ -1.81
SSR1-210ENST00000489567 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
SSR1-210ENST00000489567 ACYP2P14621 99 aa3.73□□□□□ -1.81
SSR1-210ENST00000489567 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
SSR1-210ENST00000489567 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
SSR1-210ENST00000489567 S4R3F8 94 aa3.71□□□□□ -1.82
SSR1-210ENST00000489567 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
SSR1-210ENST00000489567 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
SSR1-210ENST00000489567 A0A1B0GU33 70 aa3.62□□□□□ -1.83
SSR1-210ENST00000489567 USH2AO75445 5202 aa3.62□□□□□ -1.83
SSR1-210ENST00000489567 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
SSR1-210ENST00000489567 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
SSR1-210ENST00000489567 H0YAA0 97 aa3.53□□□□□ -1.84
SSR1-210ENST00000489567 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
SSR1-210ENST00000489567 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
SSR1-210ENST00000489567 MT1BP07438 61 aa3.5□□□□□ -1.85
SSR1-210ENST00000489567 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
SSR1-210ENST00000489567 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
SSR1-210ENST00000489567 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
SSR1-210ENST00000489567 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
SSR1-210ENST00000489567 R4GN34 69 aa3.39□□□□□ -1.87
SSR1-210ENST00000489567 M0QZ58 72 aa3.39□□□□□ -1.87
SSR1-210ENST00000489567 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
SSR1-210ENST00000489567 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
SSR1-210ENST00000489567 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
SSR1-210ENST00000489567 INE1O15225 51 aa3.31□□□□□ -1.88
SSR1-210ENST00000489567 MT1XP80297 61 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms