RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 ALMS1Q8TCU4 4167 aa1.58□□□□□ -2.16
CCL20-204ENST00000489160 MRPL34Q9BQ48 92 aaKnown RBP1.58□□□□□ -2.16
CCL20-204ENST00000489160 TP53AIP1Q9HCN2 124 aa1.58□□□□□ -2.16
CCL20-204ENST00000489160 FSIP2Q5CZC0 6907 aa1.58□□□□□ -2.16
CCL20-204ENST00000489160 NDUFA1O15239 70 aa1.57□□□□□ -2.16
CCL20-204ENST00000489160 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
CCL20-204ENST00000489160 DNAH10Q8IVF4 4471 aa1.57□□□□□ -2.16
CCL20-204ENST00000489160 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
CCL20-204ENST00000489160 CADP27708 2225 aa1.56□□□□□ -2.16
CCL20-204ENST00000489160 PLECQ15149 4684 aaKnown RBP1.56□□□□□ -2.16
CCL20-204ENST00000489160 I3L2K1 104 aa1.56□□□□□ -2.16
CCL20-204ENST00000489160 STAB2Q8WWQ8 2551 aa1.56□□□□□ -2.16
CCL20-204ENST00000489160 HSPG2P98160 4391 aa1.55□□□□□ -2.16
CCL20-204ENST00000489160 HUWE1Q7Z6Z7 4374 aaKnown RBP1.54□□□□□ -2.16
CCL20-204ENST00000489160 PKHD1P08F94 4074 aa1.54□□□□□ -2.16
CCL20-204ENST00000489160 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
CCL20-204ENST00000489160 MINOS1Q5TGZ0 78 aa1.54□□□□□ -2.16
CCL20-204ENST00000489160 ROS1P08922 2347 aa1.54□□□□□ -2.16
CCL20-204ENST00000489160 RNF213Q63HN8 5207 aa1.53□□□□□ -2.16
CCL20-204ENST00000489160 MYCBP2O75592 4640 aa1.53□□□□□ -2.16
CCL20-204ENST00000489160 STATHP02808 62 aa1.53□□□□□ -2.16
CCL20-204ENST00000489160 DYNC1H1Q14204 4646 aaKnown RBP1.53□□□□□ -2.16
CCL20-204ENST00000489160 PLCE1Q9P212 2302 aa1.53□□□□□ -2.16
CCL20-204ENST00000489160 C6orf48Q9UBA6 75 aa1.52□□□□□ -2.17
CCL20-204ENST00000489160 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
CCL20-204ENST00000489160 DMBT1Q9UGM3 2413 aaPredicted RBP1.51□□□□□ -2.17
CCL20-204ENST00000489160 WNK2Q9Y3S1 2297 aa1.51□□□□□ -2.17
CCL20-204ENST00000489160 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
CCL20-204ENST00000489160 COX6A2Q02221 97 aa1.51□□□□□ -2.17
CCL20-204ENST00000489160 HMCN2Q8NDA2 5059 aa1.5□□□□□ -2.17
CCL20-204ENST00000489160 H0YAA0 97 aa1.49□□□□□ -2.17
CCL20-204ENST00000489160 IAPPP10997 89 aa1.49□□□□□ -2.17
CCL20-204ENST00000489160 DNAH11Q96DT5 4516 aa1.49□□□□□ -2.17
CCL20-204ENST00000489160 DNAH2Q9P225 4427 aa1.48□□□□□ -2.17
CCL20-204ENST00000489160 PRB3Q04118 309 aaPredicted RBP1.48□□□□□ -2.17
CCL20-204ENST00000489160 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
CCL20-204ENST00000489160 PKD1P98161 4303 aa1.47□□□□□ -2.17
CCL20-204ENST00000489160 KRTAP20-1Q3LI63 56 aa1.47□□□□□ -2.17
CCL20-204ENST00000489160 PRO0255Q9UI72 69 aa1.47□□□□□ -2.17
CCL20-204ENST00000489160 NEBP20929 6669 aa1.47□□□□□ -2.17
CCL20-204ENST00000489160 VPS13DQ5THJ4 4388 aa1.47□□□□□ -2.17
CCL20-204ENST00000489160 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
CCL20-204ENST00000489160 DEFB108AA8MXU0 73 aa1.46□□□□□ -2.18
CCL20-204ENST00000489160 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
CCL20-204ENST00000489160 Q5VSD8 79 aa1.45□□□□□ -2.18
CCL20-204ENST00000489160 ARHGAP5-AS1Q96IT6 56 aa1.45□□□□□ -2.18
CCL20-204ENST00000489160 FAT1Q14517 4588 aa1.45□□□□□ -2.18
CCL20-204ENST00000489160 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
CCL20-204ENST00000489160 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
CCL20-204ENST00000489160 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
CCL20-204ENST00000489160 DEFB110Q30KQ9 67 aa1.44□□□□□ -2.18
CCL20-204ENST00000489160 DNAH17Q9UFH2 4485 aa1.44□□□□□ -2.18
CCL20-204ENST00000489160 H1FX-AS1Q4G0G2 97 aa1.43□□□□□ -2.18
CCL20-204ENST00000489160 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
CCL20-204ENST00000489160 LRP1BQ9NZR2 4599 aa1.42□□□□□ -2.18
CCL20-204ENST00000489160 A0A0D9SG42 100 aa1.42□□□□□ -2.18
CCL20-204ENST00000489160 SPRR1AP35321 89 aa1.42□□□□□ -2.18
CCL20-204ENST00000489160 RPS27P42677 84 aaKnown RBP1.42□□□□□ -2.18
CCL20-204ENST00000489160 POLR2KP53803 58 aaKnown RBP1.42□□□□□ -2.18
CCL20-204ENST00000489160 RPS27LQ71UM5 84 aaKnown RBP1.42□□□□□ -2.18
CCL20-204ENST00000489160 LRP2P98164 4655 aa1.41□□□□□ -2.18
CCL20-204ENST00000489160 DEFB130BP0DP73 79 aa1.41□□□□□ -2.18
CCL20-204ENST00000489160 DEFB130AP0DP74 79 aa1.41□□□□□ -2.18
CCL20-204ENST00000489160 WFDC10BQ8IUB3 73 aa1.41□□□□□ -2.18
CCL20-204ENST00000489160 WFDC13Q8IUB5 93 aa1.41□□□□□ -2.18
CCL20-204ENST00000489160 SYNE2Q8WXH0 6885 aaKnown RBP1.4□□□□□ -2.18
CCL20-204ENST00000489160 H3BUA1 57 aa1.4□□□□□ -2.19
CCL20-204ENST00000489160 DEFB131AP59861 70 aa1.4□□□□□ -2.19
CCL20-204ENST00000489160 LELP1Q5T871 98 aa1.4□□□□□ -2.19
CCL20-204ENST00000489160 DEFB105AQ8NG35 78 aa1.4□□□□□ -2.19
CCL20-204ENST00000489160 APLNQ9ULZ1 77 aa1.4□□□□□ -2.19
CCL20-204ENST00000489160 DNAH5Q8TE73 4624 aa1.39□□□□□ -2.19
CCL20-204ENST00000489160 VPS13BQ7Z7G8 4022 aa1.39□□□□□ -2.19
CCL20-204ENST00000489160 SRRM2Q9UQ35 2752 aaKnown RBP1.39□□□□□ -2.19
CCL20-204ENST00000489160 WT1-ASQ06250 92 aa1.39□□□□□ -2.19
CCL20-204ENST00000489160 LINC01590Q5TEZ4 76 aa1.38□□□□□ -2.19
CCL20-204ENST00000489160 PKHD1L1Q86WI1 4243 aa1.38□□□□□ -2.19
CCL20-204ENST00000489160 FAT3Q8TDW7 4589 aa1.38□□□□□ -2.19
CCL20-204ENST00000489160 LRP1Q07954 4544 aaKnown RBP1.37□□□□□ -2.19
CCL20-204ENST00000489160 RPL39P62891 51 aaKnown RBP1.37□□□□□ -2.19
CCL20-204ENST00000489160 KAAG1Q9UBP8 84 aa1.37□□□□□ -2.19
CCL20-204ENST00000489160 MACF1Q9UPN3 7388 aaKnown RBP1.37□□□□□ -2.19
CCL20-204ENST00000489160 SPRR1BP22528 89 aa1.36□□□□□ -2.19
CCL20-204ENST00000489160 COX14Q96I36 57 aa1.35□□□□□ -2.19
CCL20-204ENST00000489160 TTTY10Q9BZA0 68 aa1.35□□□□□ -2.19
CCL20-204ENST00000489160 RPL39LQ96EH5 51 aaKnown RBP1.34□□□□□ -2.19
CCL20-204ENST00000489160 MMP24-AS1A0A0U1RRL7 71 aa1.33□□□□□ -2.2
CCL20-204ENST00000489160 LPAP08519 4548 aa1.32□□□□□ -2.2
CCL20-204ENST00000489160 TNXBP22105 4242 aa1.31□□□□□ -2.2
CCL20-204ENST00000489160 PRCDQ00LT1 54 aa1.3□□□□□ -2.2
CCL20-204ENST00000489160 DEFB106AQ8N104 65 aa1.3□□□□□ -2.2
CCL20-204ENST00000489160 DEFB108BQ8NET1 73 aa1.29□□□□□ -2.2
CCL20-204ENST00000489160 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
CCL20-204ENST00000489160 M0QY20 66 aa1.28□□□□□ -2.2
CCL20-204ENST00000489160 PRLHP81277 87 aa1.28□□□□□ -2.2
CCL20-204ENST00000489160 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
CCL20-204ENST00000489160 NOP10Q9NPE3 64 aaKnown RBP1.28□□□□□ -2.2
CCL20-204ENST00000489160 S4R3F8 94 aa1.28□□□□□ -2.2
CCL20-204ENST00000489160 H0YGG7 62 aa1.26□□□□□ -2.21
CCL20-204ENST00000489160 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms