RNA–Protein interactions for RNA: ENST00000487842.1

SCML1-207, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 1 (best)

Gene SCML1, Length 4,615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-207ENST00000487842 KRTAP12-3P60328 96 aa2.4□□□□□ -2.03
SCML1-207ENST00000487842 KRTAP10-12P60413 245 aa2.4□□□□□ -2.03
SCML1-207ENST00000487842 HUWE1Q7Z6Z7 4374 aaKnown RBP2.37□□□□□ -2.03
SCML1-207ENST00000487842 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
SCML1-207ENST00000487842 LORP23490 312 aaPredicted RBP2.36□□□□□ -2.03
SCML1-207ENST00000487842 DNAH8Q96JB1 4490 aa2.36□□□□□ -2.03
SCML1-207ENST00000487842 PRKDCP78527 4128 aaKnown RBP2.34□□□□□ -2.03
SCML1-207ENST00000487842 ZNF469Q96JG9 3925 aaPredicted RBP2.33□□□□□ -2.04
SCML1-207ENST00000487842 DNAH11Q96DT5 4516 aa2.33□□□□□ -2.04
SCML1-207ENST00000487842 DNAH2Q9P225 4427 aa2.32□□□□□ -2.04
SCML1-207ENST00000487842 TRRAPQ9Y4A5 3859 aa2.32□□□□□ -2.04
SCML1-207ENST00000487842 DNAH1Q9P2D7 4330 aa2.32□□□□□ -2.04
SCML1-207ENST00000487842 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
SCML1-207ENST00000487842 DNAH17Q9UFH2 4485 aa2.3□□□□□ -2.04
SCML1-207ENST00000487842 LCE2BO14633 110 aa2.29□□□□□ -2.04
SCML1-207ENST00000487842 KRTAP8-1Q8IUC2 63 aa2.29□□□□□ -2.04
SCML1-207ENST00000487842 KRTAP19-4Q3LI73 84 aa2.29□□□□□ -2.04
SCML1-207ENST00000487842 CSMD3Q7Z407 3707 aa2.28□□□□□ -2.04
SCML1-207ENST00000487842 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
SCML1-207ENST00000487842 DNAH3Q8TD57 4116 aa2.25□□□□□ -2.05
SCML1-207ENST00000487842 VPS13DQ5THJ4 4388 aa2.25□□□□□ -2.05
SCML1-207ENST00000487842 LCE2AQ5TA79 106 aaPredicted RBP2.25□□□□□ -2.05
SCML1-207ENST00000487842 DNAH9Q9NYC9 4486 aa2.24□□□□□ -2.05
SCML1-207ENST00000487842 ANK2Q01484 3957 aa2.22□□□□□ -2.05
SCML1-207ENST00000487842 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
SCML1-207ENST00000487842 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
SCML1-207ENST00000487842 FRAS1Q86XX4 4008 aa2.19□□□□□ -2.06
SCML1-207ENST00000487842 LCE2CQ5TA81 110 aa2.19□□□□□ -2.06
SCML1-207ENST00000487842 DNAH5Q8TE73 4624 aa2.18□□□□□ -2.06
SCML1-207ENST00000487842 SACSQ9NZJ4 4579 aa2.18□□□□□ -2.06
SCML1-207ENST00000487842 LCE3CQ5T5A8 94 aa2.16□□□□□ -2.06
SCML1-207ENST00000487842 LYSTQ99698 3801 aa2.16□□□□□ -2.06
SCML1-207ENST00000487842 DYNC2H1Q8NCM8 4307 aaKnown RBP2.16□□□□□ -2.06
SCML1-207ENST00000487842 CMYA5Q8N3K9 4069 aa2.15□□□□□ -2.07
SCML1-207ENST00000487842 KRTAP4-1Q9BYQ7 146 aa2.14□□□□□ -2.07
SCML1-207ENST00000487842 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
SCML1-207ENST00000487842 HECTD4Q9Y4D8 3996 aa2.12□□□□□ -2.07
SCML1-207ENST00000487842 DNAH6Q9C0G6 4158 aa2.12□□□□□ -2.07
SCML1-207ENST00000487842 APOBP04114 4563 aaKnown RBP2.12□□□□□ -2.07
SCML1-207ENST00000487842 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
SCML1-207ENST00000487842 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
SCML1-207ENST00000487842 FAT1Q14517 4588 aa2.08□□□□□ -2.08
SCML1-207ENST00000487842 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
SCML1-207ENST00000487842 DNAH7Q8WXX0 4024 aa2.08□□□□□ -2.08
SCML1-207ENST00000487842 MT2AP02795 61 aa2.08□□□□□ -2.08
SCML1-207ENST00000487842 KRTAP4-8Q9BYQ9 185 aa2.08□□□□□ -2.08
SCML1-207ENST00000487842 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
SCML1-207ENST00000487842 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
SCML1-207ENST00000487842 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
SCML1-207ENST00000487842 KRTAP19-1Q8IUB9 90 aa2.06□□□□□ -2.08
SCML1-207ENST00000487842 TNXBP22105 4242 aa2.06□□□□□ -2.08
SCML1-207ENST00000487842 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.05□□□□□ -2.08
SCML1-207ENST00000487842 FAT2Q9NYQ8 4349 aa2.05□□□□□ -2.08
SCML1-207ENST00000487842 MT1HP80294 61 aa2.04□□□□□ -2.08
SCML1-207ENST00000487842 KRTAP4-5Q9BYR2 181 aa2.04□□□□□ -2.08
SCML1-207ENST00000487842 KMT2AQ03164 3969 aa2.03□□□□□ -2.08
SCML1-207ENST00000487842 MT1FP04733 61 aa2.03□□□□□ -2.09
SCML1-207ENST00000487842 LRP1Q07954 4544 aaKnown RBP2.03□□□□□ -2.09
SCML1-207ENST00000487842 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
SCML1-207ENST00000487842 MYCBP2O75592 4640 aa2.01□□□□□ -2.09
SCML1-207ENST00000487842 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
SCML1-207ENST00000487842 MT1XP80297 61 aa2□□□□□ -2.09
SCML1-207ENST00000487842 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
SCML1-207ENST00000487842 HSPG2P98160 4391 aa1.97□□□□□ -2.09
SCML1-207ENST00000487842 KRTAP10-7P60409 375 aaPredicted RBP1.97□□□□□ -2.09
SCML1-207ENST00000487842 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
SCML1-207ENST00000487842 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
SCML1-207ENST00000487842 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
SCML1-207ENST00000487842 LCE3BQ5TA77 95 aa1.96□□□□□ -2.1
SCML1-207ENST00000487842 MT1BP07438 61 aa1.95□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
SCML1-207ENST00000487842 PKD1P98161 4303 aa1.92□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP19-2Q3LHN2 52 aa1.92□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP4-8A0A0G2JLE6 195 aa1.91□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
SCML1-207ENST00000487842 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
SCML1-207ENST00000487842 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
SCML1-207ENST00000487842 RYR2Q92736 4967 aa1.9□□□□□ -2.11
SCML1-207ENST00000487842 KRTAP9-6A0A140TA67 174 aa1.9□□□□□ -2.11
SCML1-207ENST00000487842 KRTAP9-8Q9BYQ0 159 aa1.9□□□□□ -2.11
SCML1-207ENST00000487842 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
SCML1-207ENST00000487842 RYR1P21817 5038 aa1.87□□□□□ -2.11
SCML1-207ENST00000487842 MT1LQ93083 61 aa1.87□□□□□ -2.11
SCML1-207ENST00000487842 HERC1Q15751 4861 aa1.86□□□□□ -2.11
SCML1-207ENST00000487842 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
SCML1-207ENST00000487842 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
SCML1-207ENST00000487842 MT1GP13640 62 aa1.84□□□□□ -2.11
SCML1-207ENST00000487842 KRTAP9-3Q9BYQ3 159 aa1.83□□□□□ -2.12
SCML1-207ENST00000487842 LRP2P98164 4655 aa1.82□□□□□ -2.12
SCML1-207ENST00000487842 MT1EP04732 61 aa1.82□□□□□ -2.12
SCML1-207ENST00000487842 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
SCML1-207ENST00000487842 RYR3Q15413 4870 aa1.81□□□□□ -2.12
SCML1-207ENST00000487842 LCE1DQ5T752 114 aa1.79□□□□□ -2.12
SCML1-207ENST00000487842 KRTAP4-9Q9BYQ8 210 aa1.79□□□□□ -2.12
SCML1-207ENST00000487842 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.13
SCML1-207ENST00000487842 KIAA1109Q2LD37 5005 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms