RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 DNAH10Q8IVF4 4471 aa0.03□□□□□ -2.4
USP9X-208ENST00000487625 COL12A1Q99715 3063 aa0.03□□□□□ -2.4
USP9X-208ENST00000487625 FAM186AA6NE01 2351 aa0.03□□□□□ -2.4
USP9X-208ENST00000487625 DNAH6Q9C0G6 4158 aa0.03□□□□□ -2.4
USP9X-208ENST00000487625 CELSR3Q9NYQ7 3312 aa0.03□□□□□ -2.41
USP9X-208ENST00000487625 COL6A5A8TX70 2615 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 NBEAL2Q6ZNJ1 2754 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 FAT1Q14517 4588 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 NBEAQ8NFP9 2946 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 KALRNO60229 2985 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 FRYQ5TBA9 3013 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 RIF1Q5UIP0 2472 aaKnown RBP0.02□□□□□ -2.41
USP9X-208ENST00000487625 DEFB110Q30KQ9 67 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 SPENQ96T58 3664 aaKnown RBP0.02□□□□□ -2.41
USP9X-208ENST00000487625 NBPF19A0A087WUL8 3843 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 LRRK2Q5S007 2527 aa0.02□□□□□ -2.41
USP9X-208ENST00000487625 STAB2Q8WWQ8 2551 aa0.01□□□□□ -2.41
USP9X-208ENST00000487625 SPG11Q96JI7 2443 aa0.01□□□□□ -2.41
USP9X-208ENST00000487625 UTP20O75691 2785 aaKnown RBP0□□□□□ -2.41
USP9X-208ENST00000487625 LAMA1P25391 3075 aa0□□□□□ -2.41
USP9X-208ENST00000487625 USP9YO00507 2555 aaPredicted RBP0□□□□□ -2.41
USP9X-208ENST00000487625 SMR3BP02814 79 aaPredicted RBP0□□□□□ -2.41
USP9X-208ENST00000487625 MXRA5Q9NR99 2828 aa-0□□□□□ -2.41
USP9X-208ENST00000487625 MYO18BQ8IUG5 2567 aa-0□□□□□ -2.41
USP9X-208ENST00000487625 FASNP49327 2511 aaKnown RBP-0.01□□□□□ -2.41
USP9X-208ENST00000487625 TLN2Q9Y4G6 2542 aa-0.01□□□□□ -2.41
USP9X-208ENST00000487625 CHD7Q9P2D1 2997 aa-0.01□□□□□ -2.41
USP9X-208ENST00000487625 WDR87Q6ZQQ6 2873 aa-0.01□□□□□ -2.41
USP9X-208ENST00000487625 RPL39P62891 51 aaKnown RBP-0.01□□□□□ -2.41
USP9X-208ENST00000487625 PLECQ15149 4684 aaKnown RBP-0.01□□□□□ -2.41
USP9X-208ENST00000487625 HERC1Q15751 4861 aa-0.01□□□□□ -2.41
USP9X-208ENST00000487625 ITPR1Q14643 2758 aa-0.01□□□□□ -2.41
USP9X-208ENST00000487625 MUC17Q685J3 4493 aa-0.02□□□□□ -2.41
USP9X-208ENST00000487625 CRYBG3Q68DQ2 2970 aa-0.02□□□□□ -2.41
USP9X-208ENST00000487625 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
USP9X-208ENST00000487625 RELNP78509 3460 aa-0.02□□□□□ -2.41
USP9X-208ENST00000487625 DYNC1H1Q14204 4646 aaKnown RBP-0.02□□□□□ -2.41
USP9X-208ENST00000487625 ITPR3Q14573 2671 aa-0.02□□□□□ -2.41
USP9X-208ENST00000487625 AKAP9Q99996 3911 aa-0.03□□□□□ -2.41
USP9X-208ENST00000487625 NBEAL1Q6ZS30 2694 aa-0.03□□□□□ -2.41
USP9X-208ENST00000487625 MT1HP80294 61 aa-0.03□□□□□ -2.41
USP9X-208ENST00000487625 DNAH7Q8WXX0 4024 aa-0.03□□□□□ -2.42
USP9X-208ENST00000487625 MGAM2Q2M2H8 2515 aa-0.04□□□□□ -2.42
USP9X-208ENST00000487625 LAMA3Q16787 3333 aa-0.04□□□□□ -2.42
USP9X-208ENST00000487625 PCLOQ9Y6V0 5065 aa-0.04□□□□□ -2.42
USP9X-208ENST00000487625 DNAH17Q9UFH2 4485 aa-0.04□□□□□ -2.42
USP9X-208ENST00000487625 USP9XQ93008 2570 aaPredicted RBP-0.04□□□□□ -2.42
USP9X-208ENST00000487625 SPTBN5Q9NRC6 3674 aaKnown RBP-0.05□□□□□ -2.42
USP9X-208ENST00000487625 RPL39LQ96EH5 51 aaKnown RBP-0.05□□□□□ -2.42
USP9X-208ENST00000487625 MGAQ8IWI9 3026 aa-0.05□□□□□ -2.42
USP9X-208ENST00000487625 CCDC168Q8NDH2 2452 aa-0.05□□□□□ -2.42
USP9X-208ENST00000487625 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
USP9X-208ENST00000487625 CMYA5Q8N3K9 4069 aa-0.05□□□□□ -2.42
USP9X-208ENST00000487625 CSMD1Q96PZ7 3565 aa-0.06□□□□□ -2.42
USP9X-208ENST00000487625 MUC2Q02817 5179 aa-0.06□□□□□ -2.42
USP9X-208ENST00000487625 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
USP9X-208ENST00000487625 KMT2CQ8NEZ4 4911 aaKnown RBP-0.06□□□□□ -2.42
USP9X-208ENST00000487625 ZFHX4Q86UP3 3567 aa-0.06□□□□□ -2.42
USP9X-208ENST00000487625 MT1EP04732 61 aa-0.07□□□□□ -2.42
USP9X-208ENST00000487625 SPART-AS1P0CW21 52 aa-0.07□□□□□ -2.42
USP9X-208ENST00000487625 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
USP9X-208ENST00000487625 DMXL2Q8TDJ6 3036 aa-0.07□□□□□ -2.42
USP9X-208ENST00000487625 C5orf42Q9H799 3197 aa-0.07□□□□□ -2.42
USP9X-208ENST00000487625 DEFB1P60022 68 aa-0.08□□□□□ -2.42
USP9X-208ENST00000487625 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
USP9X-208ENST00000487625 LINC01590Q5TEZ4 76 aa-0.08□□□□□ -2.42
USP9X-208ENST00000487625 LEAP2Q969E1 77 aa-0.09□□□□□ -2.42
USP9X-208ENST00000487625 TOMM7Q9P0U1 55 aa-0.09□□□□□ -2.42
USP9X-208ENST00000487625 DNAH5Q8TE73 4624 aa-0.1□□□□□ -2.43
USP9X-208ENST00000487625 MT1LQ93083 61 aa-0.1□□□□□ -2.43
USP9X-208ENST00000487625 ADGRG4Q8IZF6 3080 aa-0.11□□□□□ -2.43
USP9X-208ENST00000487625 USH2AO75445 5202 aa-0.11□□□□□ -2.43
USP9X-208ENST00000487625 CFAP54Q96N23 3096 aa-0.12□□□□□ -2.43
USP9X-208ENST00000487625 MT1XP80297 61 aa-0.12□□□□□ -2.43
USP9X-208ENST00000487625 KRTAP19-8Q3LI54 63 aa-0.12□□□□□ -2.43
USP9X-208ENST00000487625 MUC12Q9UKN1 5478 aa-0.12□□□□□ -2.43
USP9X-208ENST00000487625 TRRAPQ9Y4A5 3859 aa-0.13□□□□□ -2.43
USP9X-208ENST00000487625 NIPBLQ6KC79 2804 aaeCLIP-0.13□□□□□ -2.43
USP9X-208ENST00000487625 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
USP9X-208ENST00000487625 ARHGAP5-AS1Q96IT6 56 aa-0.13□□□□□ -2.43
USP9X-208ENST00000487625 SPTAN1Q13813 2472 aaKnown RBP-0.13□□□□□ -2.43
USP9X-208ENST00000487625 TEX15Q9BXT5 2789 aa-0.14□□□□□ -2.43
USP9X-208ENST00000487625 DEFB136Q30KP8 78 aa-0.14□□□□□ -2.43
USP9X-208ENST00000487625 ATMQ13315 3056 aa-0.14□□□□□ -2.43
USP9X-208ENST00000487625 PRCDQ00LT1 54 aa-0.15□□□□□ -2.43
USP9X-208ENST00000487625 CFAP46Q8IYW2 2715 aa-0.15□□□□□ -2.43
USP9X-208ENST00000487625 EYSQ5T1H1 3165 aa-0.16□□□□□ -2.43
USP9X-208ENST00000487625 DNHD1Q96M86 4753 aa-0.16□□□□□ -2.43
USP9X-208ENST00000487625 CEP250Q9BV73 2442 aa-0.16□□□□□ -2.43
USP9X-208ENST00000487625 SRCAPQ6ZRS2 3230 aa-0.16□□□□□ -2.43
USP9X-208ENST00000487625 K7EIM0 57 aa-0.16□□□□□ -2.44
USP9X-208ENST00000487625 CSMD2Q7Z408 3487 aa-0.16□□□□□ -2.44
USP9X-208ENST00000487625 LRBAP50851 2863 aa-0.16□□□□□ -2.44
USP9X-208ENST00000487625 RYR1P21817 5038 aa-0.17□□□□□ -2.44
USP9X-208ENST00000487625 MUC3AQ02505 3323 aa-0.17□□□□□ -2.44
USP9X-208ENST00000487625 FRYLO94915 3013 aa-0.18□□□□□ -2.44
USP9X-208ENST00000487625 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
USP9X-208ENST00000487625 MT4P47944 62 aa-0.19□□□□□ -2.44
USP9X-208ENST00000487625 RHPN1-AS1Q9BWJ2 59 aa-0.19□□□□□ -2.44
USP9X-208ENST00000487625 MYO15AQ9UKN7 3530 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms