RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 KMT2AQ03164 3969 aa5.76□□□□□ -1.49
TRA2B-214ENST00000487615 DNAH8Q96JB1 4490 aa5.74□□□□□ -1.49
TRA2B-214ENST00000487615 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
TRA2B-214ENST00000487615 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
TRA2B-214ENST00000487615 KRTAP13-4Q3LI77 160 aa5.71□□□□□ -1.5
TRA2B-214ENST00000487615 KRTAP3-3Q9BYR6 98 aa5.71□□□□□ -1.5
TRA2B-214ENST00000487615 TNP1P09430 55 aa5.7□□□□□ -1.5
TRA2B-214ENST00000487615 DYNC1H1Q14204 4646 aaKnown RBP5.7□□□□□ -1.5
TRA2B-214ENST00000487615 LYSTQ99698 3801 aa5.69□□□□□ -1.5
TRA2B-214ENST00000487615 DYNC2H1Q8NCM8 4307 aaKnown RBP5.69□□□□□ -1.5
TRA2B-214ENST00000487615 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
TRA2B-214ENST00000487615 FAT1Q14517 4588 aa5.66□□□□□ -1.5
TRA2B-214ENST00000487615 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
TRA2B-214ENST00000487615 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
TRA2B-214ENST00000487615 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
TRA2B-214ENST00000487615 DNAH7Q8WXX0 4024 aa5.62□□□□□ -1.51
TRA2B-214ENST00000487615 NDUFAF8A1L188 74 aa5.59□□□□□ -1.52
TRA2B-214ENST00000487615 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
TRA2B-214ENST00000487615 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
TRA2B-214ENST00000487615 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
TRA2B-214ENST00000487615 FAT2Q9NYQ8 4349 aa5.55□□□□□ -1.52
TRA2B-214ENST00000487615 SACSQ9NZJ4 4579 aa5.54□□□□□ -1.52
TRA2B-214ENST00000487615 DNAH6Q9C0G6 4158 aa5.53□□□□□ -1.52
TRA2B-214ENST00000487615 FRAS1Q86XX4 4008 aa5.53□□□□□ -1.52
TRA2B-214ENST00000487615 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
TRA2B-214ENST00000487615 HYDINQ4G0P3 5121 aa5.42□□□□□ -1.54
TRA2B-214ENST00000487615 RYR1P21817 5038 aa5.4□□□□□ -1.54
TRA2B-214ENST00000487615 KIAA1109Q2LD37 5005 aa5.4□□□□□ -1.54
TRA2B-214ENST00000487615 APOBP04114 4563 aaKnown RBP5.38□□□□□ -1.55
TRA2B-214ENST00000487615 LRP1Q07954 4544 aaKnown RBP5.32□□□□□ -1.56
TRA2B-214ENST00000487615 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
TRA2B-214ENST00000487615 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
TRA2B-214ENST00000487615 RYR2Q92736 4967 aa5.32□□□□□ -1.56
TRA2B-214ENST00000487615 RYR3Q15413 4870 aa5.32□□□□□ -1.56
TRA2B-214ENST00000487615 KRTAP17-1Q9BYP8 105 aa5.32□□□□□ -1.56
TRA2B-214ENST00000487615 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
TRA2B-214ENST00000487615 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
TRA2B-214ENST00000487615 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-214ENST00000487615 PKD1P98161 4303 aa5.26□□□□□ -1.57
TRA2B-214ENST00000487615 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
TRA2B-214ENST00000487615 KMT2CQ8NEZ4 4911 aaKnown RBP5.14□□□□□ -1.59
TRA2B-214ENST00000487615 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
TRA2B-214ENST00000487615 HSPG2P98160 4391 aa5.13□□□□□ -1.59
TRA2B-214ENST00000487615 LRP2P98164 4655 aa5.06□□□□□ -1.6
TRA2B-214ENST00000487615 LCE2DQ5TA82 110 aaPredicted RBP5.02□□□□□ -1.61
TRA2B-214ENST00000487615 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
TRA2B-214ENST00000487615 HERC2O95714 4834 aa5.01□□□□□ -1.61
TRA2B-214ENST00000487615 PKHD1L1Q86WI1 4243 aa4.99□□□□□ -1.61
TRA2B-214ENST00000487615 MT1HP80294 61 aa4.99□□□□□ -1.61
TRA2B-214ENST00000487615 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
TRA2B-214ENST00000487615 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
TRA2B-214ENST00000487615 TNXBP22105 4242 aa4.94□□□□□ -1.62
TRA2B-214ENST00000487615 MT2AP02795 61 aa4.92□□□□□ -1.62
TRA2B-214ENST00000487615 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
TRA2B-214ENST00000487615 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
TRA2B-214ENST00000487615 MT1FP04733 61 aa4.86□□□□□ -1.63
TRA2B-214ENST00000487615 LPAP08519 4548 aa4.86□□□□□ -1.63
TRA2B-214ENST00000487615 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
TRA2B-214ENST00000487615 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
TRA2B-214ENST00000487615 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.65
TRA2B-214ENST00000487615 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
TRA2B-214ENST00000487615 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
TRA2B-214ENST00000487615 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
TRA2B-214ENST00000487615 HERC1Q15751 4861 aa4.73□□□□□ -1.65
TRA2B-214ENST00000487615 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
TRA2B-214ENST00000487615 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
TRA2B-214ENST00000487615 MUC17Q685J3 4493 aa4.62□□□□□ -1.67
TRA2B-214ENST00000487615 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
TRA2B-214ENST00000487615 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
TRA2B-214ENST00000487615 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
TRA2B-214ENST00000487615 MT1BP07438 61 aa4.56□□□□□ -1.68
TRA2B-214ENST00000487615 MT1XP80297 61 aa4.54□□□□□ -1.68
TRA2B-214ENST00000487615 INE1O15225 51 aa4.53□□□□□ -1.68
TRA2B-214ENST00000487615 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
TRA2B-214ENST00000487615 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
TRA2B-214ENST00000487615 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
TRA2B-214ENST00000487615 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
TRA2B-214ENST00000487615 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
TRA2B-214ENST00000487615 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
TRA2B-214ENST00000487615 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
TRA2B-214ENST00000487615 MUC2Q02817 5179 aa4.38□□□□□ -1.71
TRA2B-214ENST00000487615 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
TRA2B-214ENST00000487615 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
TRA2B-214ENST00000487615 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
TRA2B-214ENST00000487615 LCE2BO14633 110 aa4.31□□□□□ -1.72
TRA2B-214ENST00000487615 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
TRA2B-214ENST00000487615 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
TRA2B-214ENST00000487615 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
TRA2B-214ENST00000487615 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
TRA2B-214ENST00000487615 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
TRA2B-214ENST00000487615 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
TRA2B-214ENST00000487615 MT1LQ93083 61 aa4.02□□□□□ -1.77
TRA2B-214ENST00000487615 MT1EP04732 61 aa4.02□□□□□ -1.77
TRA2B-214ENST00000487615 MT1GP13640 62 aa4.01□□□□□ -1.77
TRA2B-214ENST00000487615 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
TRA2B-214ENST00000487615 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
TRA2B-214ENST00000487615 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
TRA2B-214ENST00000487615 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
TRA2B-214ENST00000487615 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
TRA2B-214ENST00000487615 SPRR2EP22531 72 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms