RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 Q9BRP9 147 aa2.74□□□□□ -1.97
RTN4-214ENST00000486085 CYP4F30PQ9H0H9 118 aa2.74□□□□□ -1.97
RTN4-214ENST00000486085 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
RTN4-214ENST00000486085 A6NED7 52 aa2.73□□□□□ -1.97
RTN4-214ENST00000486085 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
RTN4-214ENST00000486085 Q5VSD8 79 aa2.73□□□□□ -1.97
RTN4-214ENST00000486085 ROMO1P60602 79 aa2.72□□□□□ -1.97
RTN4-214ENST00000486085 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
RTN4-214ENST00000486085 PCLOQ9Y6V0 5065 aa2.71□□□□□ -1.98
RTN4-214ENST00000486085 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
RTN4-214ENST00000486085 TEX49A0A1B0GTD5 131 aa2.7□□□□□ -1.98
RTN4-214ENST00000486085 HAMPP81172 84 aa2.7□□□□□ -1.98
RTN4-214ENST00000486085 PRLHP81277 87 aa2.7□□□□□ -1.98
RTN4-214ENST00000486085 ATXN8Q156A1 80 aa2.7□□□□□ -1.98
RTN4-214ENST00000486085 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
RTN4-214ENST00000486085 DMBT1Q9UGM3 2413 aaPredicted RBP2.69□□□□□ -1.98
RTN4-214ENST00000486085 HCG22E2RYF7 251 aa2.69□□□□□ -1.98
RTN4-214ENST00000486085 ERC2-IT1O76042 136 aa2.69□□□□□ -1.98
RTN4-214ENST00000486085 SMR3BP02814 79 aaPredicted RBP2.69□□□□□ -1.98
RTN4-214ENST00000486085 RPS29P62273 56 aaKnown RBP2.69□□□□□ -1.98
RTN4-214ENST00000486085 Q6ZQY7 126 aa2.69□□□□□ -1.98
RTN4-214ENST00000486085 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
RTN4-214ENST00000486085 HIGD2AQ9BW72 106 aa2.69□□□□□ -1.98
RTN4-214ENST00000486085 CDC42SE1Q9NRR8 79 aa2.69□□□□□ -1.98
RTN4-214ENST00000486085 TRAV7A0A075B6U4 112 aa2.68□□□□□ -1.98
RTN4-214ENST00000486085 H7C2G1 150 aa2.68□□□□□ -1.98
RTN4-214ENST00000486085 Q6ZQT0 140 aa2.68□□□□□ -1.98
RTN4-214ENST00000486085 OBSCN-AS1Q96MR7 158 aa2.68□□□□□ -1.98
RTN4-214ENST00000486085 ORMDL1Q9P0S3 153 aa2.68□□□□□ -1.98
RTN4-214ENST00000486085 A0A087WSZ3 146 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 TRAV22A0A0B4J277 110 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 DNAL4O96015 105 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 Q6JHZ5 121 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 CASC2Q6XLA1 102 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 SPTSSBQ8NFR3 76 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 C14orf132Q9NPU4 83 aa2.67□□□□□ -1.98
RTN4-214ENST00000486085 TRBV7-4A0A0J9YYF1 115 aa2.66□□□□□ -1.98
RTN4-214ENST00000486085 JMJD7-PLA2G4BH0Y9G9 81 aa2.66□□□□□ -1.98
RTN4-214ENST00000486085 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
RTN4-214ENST00000486085 PDE6GP18545 87 aa2.66□□□□□ -1.98
RTN4-214ENST00000486085 SPAG11AQ6PDA7 123 aa2.66□□□□□ -1.98
RTN4-214ENST00000486085 ZCCHC13Q8WW36 166 aaKnown RBP2.66□□□□□ -1.98
RTN4-214ENST00000486085 LOC110117498A0A087WWA1 95 aa2.65□□□□□ -1.99
RTN4-214ENST00000486085 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
RTN4-214ENST00000486085 Q5VV11 94 aa2.65□□□□□ -1.99
RTN4-214ENST00000486085 C20orf197Q8N268 126 aa2.65□□□□□ -1.99
RTN4-214ENST00000486085 LIMD2Q9BT23 127 aa2.65□□□□□ -1.99
RTN4-214ENST00000486085 H3BPC8 53 aa2.64□□□□□ -1.99
RTN4-214ENST00000486085 SPINK1P00995 79 aa2.64□□□□□ -1.99
RTN4-214ENST00000486085 BAALC-AS2P0C853 105 aa2.64□□□□□ -1.99
RTN4-214ENST00000486085 HERC1Q15751 4861 aa2.63□□□□□ -1.99
RTN4-214ENST00000486085 F8WEM9 126 aa2.63□□□□□ -1.99
RTN4-214ENST00000486085 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
RTN4-214ENST00000486085 ATP5EP2Q5VTU8 51 aa2.63□□□□□ -1.99
RTN4-214ENST00000486085 C20orf166-AS1Q96NR2 134 aa2.62□□□□□ -1.99
RTN4-214ENST00000486085 LOC101927531A0A1B0GV80 90 aa2.61□□□□□ -1.99
RTN4-214ENST00000486085 CHKB-CPT1BH3BT56 60 aa2.61□□□□□ -1.99
RTN4-214ENST00000486085 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
RTN4-214ENST00000486085 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
RTN4-214ENST00000486085 DEFB105AQ8NG35 78 aa2.6□□□□□ -1.99
RTN4-214ENST00000486085 A0A1W2PNM2 257 aa2.59□□□□□ -1.99
RTN4-214ENST00000486085 TMEM254Q8TBM7 123 aa2.58□□□□□ -2
RTN4-214ENST00000486085 Q96NJ1 140 aa2.56□□□□□ -2
RTN4-214ENST00000486085 LINC00472Q9H8W2 130 aa2.56□□□□□ -2
RTN4-214ENST00000486085 A0A1B0GU33 70 aa2.55□□□□□ -2
RTN4-214ENST00000486085 TPRXLQ17RH7 258 aa2.55□□□□□ -2
RTN4-214ENST00000486085 LRP2P98164 4655 aa2.55□□□□□ -2
RTN4-214ENST00000486085 KRTAP5-8O75690 187 aa2.53□□□□□ -2
RTN4-214ENST00000486085 KRTAP12-4P60329 112 aa2.53□□□□□ -2
RTN4-214ENST00000486085 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
RTN4-214ENST00000486085 MUC17Q685J3 4493 aa2.52□□□□□ -2.01
RTN4-214ENST00000486085 CSAG1Q6PB30 78 aa2.52□□□□□ -2.01
RTN4-214ENST00000486085 UBL5Q9BZL1 73 aa2.52□□□□□ -2.01
RTN4-214ENST00000486085 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
RTN4-214ENST00000486085 A0A0G2JQZ4 141 aa2.51□□□□□ -2.01
RTN4-214ENST00000486085 NREPQ16612 68 aa2.51□□□□□ -2.01
RTN4-214ENST00000486085 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
RTN4-214ENST00000486085 SNURFQ9Y675 71 aa2.5□□□□□ -2.01
RTN4-214ENST00000486085 LPAP08519 4548 aa2.5□□□□□ -2.01
RTN4-214ENST00000486085 NDUFB1O75438 58 aa2.49□□□□□ -2.01
RTN4-214ENST00000486085 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
RTN4-214ENST00000486085 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
RTN4-214ENST00000486085 A0A087WVE0 104 aa2.47□□□□□ -2.01
RTN4-214ENST00000486085 MMP24-AS1A0A0U1RRL7 71 aa2.46□□□□□ -2.02
RTN4-214ENST00000486085 K7EQZ3 153 aa2.45□□□□□ -2.02
RTN4-214ENST00000486085 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
RTN4-214ENST00000486085 UBR4Q5T4S7 5183 aa2.45□□□□□ -2.02
RTN4-214ENST00000486085 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
RTN4-214ENST00000486085 MRPL34Q9BQ48 92 aaKnown RBP2.43□□□□□ -2.02
RTN4-214ENST00000486085 TP53AIP1Q9HCN2 124 aa2.42□□□□□ -2.02
RTN4-214ENST00000486085 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
RTN4-214ENST00000486085 MUC2Q02817 5179 aa2.4□□□□□ -2.02
RTN4-214ENST00000486085 C9orf92A6NGG3 77 aa2.39□□□□□ -2.03
RTN4-214ENST00000486085 UQCR11O14957 56 aa2.39□□□□□ -2.03
RTN4-214ENST00000486085 LINC00208Q96KT6 92 aa2.39□□□□□ -2.03
RTN4-214ENST00000486085 WFDC13Q8IUB5 93 aa2.38□□□□□ -2.03
RTN4-214ENST00000486085 H0Y9P7 68 aa2.37□□□□□ -2.03
RTN4-214ENST00000486085 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
RTN4-214ENST00000486085 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
RTN4-214ENST00000486085 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms