RNA–Protein interactions for RNA: ENST00000483507.1

PLS1-209, Transcript of plastin 1, humanhuman

TSL 2

Gene PLS1, Length 749 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-209ENST00000483507 VPS13DQ5THJ4 4388 aa0.29□□□□□ -2.36
PLS1-209ENST00000483507 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
PLS1-209ENST00000483507 UNC79Q9P2D8 2635 aa0.28□□□□□ -2.36
PLS1-209ENST00000483507 SMR3BP02814 79 aaPredicted RBP0.28□□□□□ -2.36
PLS1-209ENST00000483507 KRTAP6-2Q3LI66 62 aa0.28□□□□□ -2.36
PLS1-209ENST00000483507 LAMA1P25391 3075 aa0.28□□□□□ -2.36
PLS1-209ENST00000483507 SPTBN5Q9NRC6 3674 aaKnown RBP0.28□□□□□ -2.37
PLS1-209ENST00000483507 MUC3AQ02505 3323 aa0.28□□□□□ -2.37
PLS1-209ENST00000483507 LAMA3Q16787 3333 aa0.28□□□□□ -2.37
PLS1-209ENST00000483507 MXRA5Q9NR99 2828 aa0.28□□□□□ -2.37
PLS1-209ENST00000483507 CFAP47Q6ZTR5 3102 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 VPS13BQ7Z7G8 4022 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 HIVEP1P15822 2718 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 CSMD1Q96PZ7 3565 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 SPRR2BP35325 72 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 FREM2Q5SZK8 3169 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 CSMD2Q7Z408 3487 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 CACNA1AO00555 2505 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 MTORP42345 2549 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 AKAP9Q99996 3911 aa0.27□□□□□ -2.37
PLS1-209ENST00000483507 XIRP2A4UGR9 3374 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 ACACBO00763 2458 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 UTP20O75691 2785 aaKnown RBP0.26□□□□□ -2.37
PLS1-209ENST00000483507 MT1AP04731 61 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 LINC01556Q5JQF7 62 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 FAT2Q9NYQ8 4349 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 SONP18583 2426 aaKnown RBP0.26□□□□□ -2.37
PLS1-209ENST00000483507 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
PLS1-209ENST00000483507 ITPR1Q14643 2758 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 NIPBLQ6KC79 2804 aaeCLIP0.26□□□□□ -2.37
PLS1-209ENST00000483507 WDFY4Q6ZS81 3184 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 LAMA5O15230 3695 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 HECTD4Q9Y4D8 3996 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 DNAH11Q96DT5 4516 aa0.26□□□□□ -2.37
PLS1-209ENST00000483507 SACSQ9NZJ4 4579 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 PRKDCP78527 4128 aaKnown RBP0.25□□□□□ -2.37
PLS1-209ENST00000483507 LOC400499M0QZD8 3231 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 SRCAPQ6ZRS2 3230 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 HTN3P15516 51 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 SPRR2AP35326 72 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 KRTAP19-5Q3LI72 72 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 FLNBO75369 2602 aaKnown RBP0.25□□□□□ -2.37
PLS1-209ENST00000483507 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 PTPN13Q12923 2485 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 RIF1Q5UIP0 2472 aaKnown RBP0.25□□□□□ -2.37
PLS1-209ENST00000483507 SMG1Q96Q15 3661 aaKnown RBP0.25□□□□□ -2.37
PLS1-209ENST00000483507 SPEGQ15772 3267 aa0.25□□□□□ -2.37
PLS1-209ENST00000483507 HSPG2P98160 4391 aa0.24□□□□□ -2.37
PLS1-209ENST00000483507 TEP1Q99973 2627 aaKnown RBP0.24□□□□□ -2.37
PLS1-209ENST00000483507 SVEP1Q4LDE5 3571 aa0.24□□□□□ -2.37
PLS1-209ENST00000483507 ZFYVE26Q68DK2 2539 aa0.24□□□□□ -2.37
PLS1-209ENST00000483507 NCOR2Q9Y618 2525 aa0.24□□□□□ -2.37
PLS1-209ENST00000483507 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
PLS1-209ENST00000483507 CD52P31358 61 aa0.24□□□□□ -2.37
PLS1-209ENST00000483507 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
PLS1-209ENST00000483507 Q9Y3F1 56 aa0.24□□□□□ -2.37
PLS1-209ENST00000483507 ANKHD1Q8IWZ3 2542 aaKnown RBP0.24□□□□□ -2.37
PLS1-209ENST00000483507 EPG5Q9HCE0 2579 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 SPG11Q96JI7 2443 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 FAM186AA6NE01 2351 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 MAP1AP78559 2803 aaPredicted RBP0.23□□□□□ -2.37
PLS1-209ENST00000483507 SPRR2EP22531 72 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 SPRR2FQ96RM1 72 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 TEX15Q9BXT5 2789 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 DNAH3Q8TD57 4116 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 LAMA2P24043 3122 aaKnown RBP0.23□□□□□ -2.37
PLS1-209ENST00000483507 FLGP20930 4061 aaPredicted RBP0.23□□□□□ -2.37
PLS1-209ENST00000483507 DYNC2H1Q8NCM8 4307 aaKnown RBP0.23□□□□□ -2.37
PLS1-209ENST00000483507 DMDP11532 3685 aa0.23□□□□□ -2.37
PLS1-209ENST00000483507 LRP1Q07954 4544 aaKnown RBP0.23□□□□□ -2.37
PLS1-209ENST00000483507 VPS13AQ96RL7 3174 aa0.22□□□□□ -2.37
PLS1-209ENST00000483507 MYO18BQ8IUG5 2567 aa0.22□□□□□ -2.37
PLS1-209ENST00000483507 USP9XQ93008 2570 aaPredicted RBP0.22□□□□□ -2.37
PLS1-209ENST00000483507 DNAH2Q9P225 4427 aa0.22□□□□□ -2.37
PLS1-209ENST00000483507 PKD1P98161 4303 aa0.22□□□□□ -2.37
PLS1-209ENST00000483507 TGP01266 2768 aa0.22□□□□□ -2.37
PLS1-209ENST00000483507 GOLGB1Q14789 3259 aaKnown RBP0.21□□□□□ -2.38
PLS1-209ENST00000483507 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
PLS1-209ENST00000483507 ASPMQ8IZT6 3477 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 UTRNP46939 3433 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 TLN2Q9Y4G6 2542 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 DEFB4AO15263 64 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 DNAH7Q8WXX0 4024 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 EYSQ5T1H1 3165 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 FASNP49327 2511 aaKnown RBP0.21□□□□□ -2.38
PLS1-209ENST00000483507 ITPR2Q14571 2701 aa0.21□□□□□ -2.38
PLS1-209ENST00000483507 ANK3Q12955 4377 aaKnown RBP0.2□□□□□ -2.38
PLS1-209ENST00000483507 DNAH6Q9C0G6 4158 aa0.2□□□□□ -2.38
PLS1-209ENST00000483507 CFAP46Q8IYW2 2715 aa0.2□□□□□ -2.38
PLS1-209ENST00000483507 CEP250Q9BV73 2442 aa0.2□□□□□ -2.38
PLS1-209ENST00000483507 VCANP13611 3396 aa0.2□□□□□ -2.38
PLS1-209ENST00000483507 GPR98Q8WXG9 6306 aa0.2□□□□□ -2.38
PLS1-209ENST00000483507 DNAH1Q9P2D7 4330 aa0.19□□□□□ -2.38
PLS1-209ENST00000483507 MYO15AQ9UKN7 3530 aa0.19□□□□□ -2.38
PLS1-209ENST00000483507 PCNTO95613 3336 aa0.19□□□□□ -2.38
PLS1-209ENST00000483507 HUWE1Q7Z6Z7 4374 aaKnown RBP0.19□□□□□ -2.38
PLS1-209ENST00000483507 MGAM2Q2M2H8 2515 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms