RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ATOX1O00244 68 aa1.43□□□□□ -2.18
GTF3A-207ENST00000482655 Q6ZQT0 140 aa1.43□□□□□ -2.18
GTF3A-207ENST00000482655 SMIM20Q8N5G0 67 aa1.43□□□□□ -2.18
GTF3A-207ENST00000482655 SERP2Q8N6R1 65 aa1.43□□□□□ -2.18
GTF3A-207ENST00000482655 COX7B2Q8TF08 81 aa1.43□□□□□ -2.18
GTF3A-207ENST00000482655 LOC107984640A0A0U1RRK4 108 aa1.42□□□□□ -2.18
GTF3A-207ENST00000482655 JMJD7-PLA2G4BH0Y9G9 81 aa1.42□□□□□ -2.18
GTF3A-207ENST00000482655 H7BZZ5 65 aa1.42□□□□□ -2.18
GTF3A-207ENST00000482655 CNBPP62633 177 aaKnown RBP1.42□□□□□ -2.18
GTF3A-207ENST00000482655 Q1T7F1 81 aa1.42□□□□□ -2.18
GTF3A-207ENST00000482655 ATP5EP2Q5VTU8 51 aa1.42□□□□□ -2.18
GTF3A-207ENST00000482655 LINC00575Q6W349 94 aa1.42□□□□□ -2.18
GTF3A-207ENST00000482655 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
GTF3A-207ENST00000482655 FLGP20930 4061 aaPredicted RBP1.41□□□□□ -2.18
GTF3A-207ENST00000482655 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
GTF3A-207ENST00000482655 IGLV5-48A0A075B6I7 105 aa1.41□□□□□ -2.18
GTF3A-207ENST00000482655 A0A096LNI7 61 aa1.41□□□□□ -2.18
GTF3A-207ENST00000482655 TMEM256-PLSCR3K7ERE1 68 aa1.41□□□□□ -2.18
GTF3A-207ENST00000482655 ERC2-IT1O76042 136 aa1.41□□□□□ -2.18
GTF3A-207ENST00000482655 NPC2P61916 151 aa1.41□□□□□ -2.18
GTF3A-207ENST00000482655 RETNLBQ9BQ08 111 aa1.41□□□□□ -2.18
GTF3A-207ENST00000482655 A0A087WVE0 104 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 TRAV13-1A0A0B4J241 112 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 hADV29S1A0JD25 119 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 J3KT08 172 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 NCR3O14931 201 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 PDE6GP18545 87 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 SPRR1AP35321 89 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 ELOF1P60002 83 aaKnown RBP1.4□□□□□ -2.19
GTF3A-207ENST00000482655 LINC01554Q52M75 96 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 C9orf153Q5TBE3 101 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 C14orf132Q9NPU4 83 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 ORMDL1Q9P0S3 153 aa1.4□□□□□ -2.19
GTF3A-207ENST00000482655 CLPSL2Q6UWE3 100 aa1.39□□□□□ -2.19
GTF3A-207ENST00000482655 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
GTF3A-207ENST00000482655 LCA10Q71F78 164 aa1.39□□□□□ -2.19
GTF3A-207ENST00000482655 SPRR4Q96PI1 79 aa1.39□□□□□ -2.19
GTF3A-207ENST00000482655 C6orf48Q9UBA6 75 aa1.39□□□□□ -2.19
GTF3A-207ENST00000482655 IGKV3D-7A0A0C4DH55 119 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 LINC00158P58513 81 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 RBM3P98179 157 aaKnown RBP1.38□□□□□ -2.19
GTF3A-207ENST00000482655 ASB16-AS1Q495Z4 193 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 SERP1Q9Y6X1 66 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 NEBP20929 6669 aa1.38□□□□□ -2.19
GTF3A-207ENST00000482655 NDUFC1O43677 76 aa1.37□□□□□ -2.19
GTF3A-207ENST00000482655 DNAL4O96015 105 aa1.37□□□□□ -2.19
GTF3A-207ENST00000482655 COX7BP24311 80 aa1.37□□□□□ -2.19
GTF3A-207ENST00000482655 C9orf116Q5BN46 136 aaPredicted RBP1.37□□□□□ -2.19
GTF3A-207ENST00000482655 PHF5AQ7RTV0 110 aaKnown RBP1.37□□□□□ -2.19
GTF3A-207ENST00000482655 LINC00269Q8N2A0 174 aa1.37□□□□□ -2.19
GTF3A-207ENST00000482655 DSCR8Q96T75 97 aa1.37□□□□□ -2.19
GTF3A-207ENST00000482655 IGKV3OR2-268A0A0C4DH90 116 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 SPRR1BP22528 89 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 ATP5EP56381 51 aaPredicted RBP1.36□□□□□ -2.19
GTF3A-207ENST00000482655 Q6ZQY7 126 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 OR13C6PQ8NH95 151 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 UBL5Q9BZL1 73 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 CYP4F30PQ9H0H9 118 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 MUC12Q9UKN1 5478 aa1.36□□□□□ -2.19
GTF3A-207ENST00000482655 TRAV23DV6A0A075B6W5 121 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 M0R378 163 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 ANGP03950 147 aaKnown RBP1.35□□□□□ -2.19
GTF3A-207ENST00000482655 SPAG11BQ08648 103 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 C1orf137Q5JT78 98 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 C20orf197Q8N268 126 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 TOMM7Q9P0U1 55 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 SNURFQ9Y675 71 aa1.35□□□□□ -2.19
GTF3A-207ENST00000482655 hDV103S1A0JD37 113 aa1.34□□□□□ -2.19
GTF3A-207ENST00000482655 KRTAP20-1Q3LI63 56 aa1.34□□□□□ -2.19
GTF3A-207ENST00000482655 KRTAP19-6Q3LI70 58 aa1.34□□□□□ -2.19
GTF3A-207ENST00000482655 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
GTF3A-207ENST00000482655 DIRC1Q969H9 104 aa1.34□□□□□ -2.19
GTF3A-207ENST00000482655 F8WEM9 126 aa1.33□□□□□ -2.2
GTF3A-207ENST00000482655 NREPQ16612 68 aa1.33□□□□□ -2.2
GTF3A-207ENST00000482655 HRCT1Q6UXD1 115 aa1.33□□□□□ -2.2
GTF3A-207ENST00000482655 Q6ZRX8 168 aa1.33□□□□□ -2.2
GTF3A-207ENST00000482655 LINC00474Q9P2X8 69 aa1.33□□□□□ -2.2
GTF3A-207ENST00000482655 MT2AP02795 61 aa1.32□□□□□ -2.2
GTF3A-207ENST00000482655 MT1FP04733 61 aa1.32□□□□□ -2.2
GTF3A-207ENST00000482655 LINC00472Q9H8W2 130 aa1.32□□□□□ -2.2
GTF3A-207ENST00000482655 LOC101927531A0A1B0GV80 90 aa1.31□□□□□ -2.2
GTF3A-207ENST00000482655 UBE2BP63146 152 aa1.31□□□□□ -2.2
GTF3A-207ENST00000482655 PRR15Q8IV56 129 aa1.31□□□□□ -2.2
GTF3A-207ENST00000482655 Q96NJ1 140 aa1.31□□□□□ -2.2
GTF3A-207ENST00000482655 LAMTOR3Q9UHA4 124 aa1.31□□□□□ -2.2
GTF3A-207ENST00000482655 KMT2DO14686 5537 aa1.3□□□□□ -2.2
GTF3A-207ENST00000482655 TRAV22A0A0B4J277 110 aa1.3□□□□□ -2.2
GTF3A-207ENST00000482655 ETDCA0A1B0GVM5 59 aa1.3□□□□□ -2.2
GTF3A-207ENST00000482655 K7EQZ3 153 aa1.3□□□□□ -2.2
GTF3A-207ENST00000482655 MMP24-AS1A0A0U1RRL7 71 aa1.29□□□□□ -2.2
GTF3A-207ENST00000482655 HCG22E2RYF7 251 aa1.29□□□□□ -2.2
GTF3A-207ENST00000482655 Q5VV11 94 aa1.29□□□□□ -2.2
GTF3A-207ENST00000482655 M0R2T5 61 aa1.27□□□□□ -2.21
GTF3A-207ENST00000482655 NDUFB1O75438 58 aa1.27□□□□□ -2.21
GTF3A-207ENST00000482655 LINC01558Q9Y6Z2 57 aa1.27□□□□□ -2.21
GTF3A-207ENST00000482655 A6NN06 94 aa1.26□□□□□ -2.21
GTF3A-207ENST00000482655 A0A087WSZ3 146 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms