RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 NEBP20929 6669 aa0.67□□□□□ -2.3
RBM39-233ENST00000482563 ZANQ9Y493 2812 aa0.66□□□□□ -2.3
RBM39-233ENST00000482563 FAT3Q8TDW7 4589 aa0.66□□□□□ -2.3
RBM39-233ENST00000482563 DYNC2H1Q8NCM8 4307 aaKnown RBP0.65□□□□□ -2.31
RBM39-233ENST00000482563 FSIP2Q5CZC0 6907 aa0.65□□□□□ -2.31
RBM39-233ENST00000482563 RYR2Q92736 4967 aa0.65□□□□□ -2.31
RBM39-233ENST00000482563 TNP1P09430 55 aa0.64□□□□□ -2.31
RBM39-233ENST00000482563 CEP350Q5VT06 3117 aa0.64□□□□□ -2.31
RBM39-233ENST00000482563 DEFB110Q30KQ9 67 aa0.64□□□□□ -2.31
RBM39-233ENST00000482563 FAM186AA6NE01 2351 aa0.63□□□□□ -2.31
RBM39-233ENST00000482563 RYR1P21817 5038 aa0.63□□□□□ -2.31
RBM39-233ENST00000482563 KMT2CQ8NEZ4 4911 aaKnown RBP0.63□□□□□ -2.31
RBM39-233ENST00000482563 RPL39P62891 51 aaKnown RBP0.63□□□□□ -2.31
RBM39-233ENST00000482563 SPTBN5Q9NRC6 3674 aaKnown RBP0.63□□□□□ -2.31
RBM39-233ENST00000482563 TGP01266 2768 aa0.62□□□□□ -2.31
RBM39-233ENST00000482563 WDFY4Q6ZS81 3184 aa0.62□□□□□ -2.31
RBM39-233ENST00000482563 VPS13DQ5THJ4 4388 aa0.62□□□□□ -2.31
RBM39-233ENST00000482563 SPRR2AP35326 72 aa0.61□□□□□ -2.31
RBM39-233ENST00000482563 FRYQ5TBA9 3013 aa0.61□□□□□ -2.31
RBM39-233ENST00000482563 KRTAP20-1Q3LI63 56 aa0.61□□□□□ -2.31
RBM39-233ENST00000482563 ABCA13Q86UQ4 5058 aa0.6□□□□□ -2.31
RBM39-233ENST00000482563 CELSR3Q9NYQ7 3312 aa0.6□□□□□ -2.31
RBM39-233ENST00000482563 ACACBO00763 2458 aa0.6□□□□□ -2.31
RBM39-233ENST00000482563 LRP2P98164 4655 aa0.59□□□□□ -2.31
RBM39-233ENST00000482563 WDR87Q6ZQQ6 2873 aa0.59□□□□□ -2.31
RBM39-233ENST00000482563 RYR3Q15413 4870 aa0.59□□□□□ -2.32
RBM39-233ENST00000482563 HERC1Q15751 4861 aa0.58□□□□□ -2.32
RBM39-233ENST00000482563 USP9YO00507 2555 aaPredicted RBP0.58□□□□□ -2.32
RBM39-233ENST00000482563 PCNTO95613 3336 aa0.58□□□□□ -2.32
RBM39-233ENST00000482563 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
RBM39-233ENST00000482563 ITPR1Q14643 2758 aa0.58□□□□□ -2.32
RBM39-233ENST00000482563 EPPK1P58107 5090 aaKnown RBP0.58□□□□□ -2.32
RBM39-233ENST00000482563 MYO9AB2RTY4 2548 aa0.57□□□□□ -2.32
RBM39-233ENST00000482563 HYDINQ4G0P3 5121 aa0.57□□□□□ -2.32
RBM39-233ENST00000482563 CRYBG3Q68DQ2 2970 aa0.57□□□□□ -2.32
RBM39-233ENST00000482563 DNAH6Q9C0G6 4158 aa0.57□□□□□ -2.32
RBM39-233ENST00000482563 KMT2DO14686 5537 aa0.57□□□□□ -2.32
RBM39-233ENST00000482563 BIRC6Q9NR09 4857 aa0.56□□□□□ -2.32
RBM39-233ENST00000482563 GCC2Q8IWJ2 1684 aa0.56□□□□□ -2.32
RBM39-233ENST00000482563 LAMA5O15230 3695 aa0.56□□□□□ -2.32
RBM39-233ENST00000482563 SSPOA2VEC9 5147 aa0.56□□□□□ -2.32
RBM39-233ENST00000482563 DNAH8Q96JB1 4490 aa0.55□□□□□ -2.32
RBM39-233ENST00000482563 CEP295Q9C0D2 2601 aa0.55□□□□□ -2.32
RBM39-233ENST00000482563 MT1AP04731 61 aa0.55□□□□□ -2.32
RBM39-233ENST00000482563 NBEAL1Q6ZS30 2694 aa0.54□□□□□ -2.32
RBM39-233ENST00000482563 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
RBM39-233ENST00000482563 NBPF19A0A087WUL8 3843 aa0.54□□□□□ -2.32
RBM39-233ENST00000482563 ZFHX4Q86UP3 3567 aa0.53□□□□□ -2.33
RBM39-233ENST00000482563 STAB2Q8WWQ8 2551 aa0.52□□□□□ -2.33
RBM39-233ENST00000482563 RNF213Q63HN8 5207 aa0.52□□□□□ -2.33
RBM39-233ENST00000482563 CFAP46Q8IYW2 2715 aa0.52□□□□□ -2.33
RBM39-233ENST00000482563 LAMA2P24043 3122 aaKnown RBP0.52□□□□□ -2.33
RBM39-233ENST00000482563 RPL39LQ96EH5 51 aaKnown RBP0.51□□□□□ -2.33
RBM39-233ENST00000482563 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
RBM39-233ENST00000482563 TRIOO75962 3097 aa0.51□□□□□ -2.33
RBM39-233ENST00000482563 MXRA5Q9NR99 2828 aa0.5□□□□□ -2.33
RBM39-233ENST00000482563 VCANP13611 3396 aa0.5□□□□□ -2.33
RBM39-233ENST00000482563 DNHD1Q96M86 4753 aa0.49□□□□□ -2.33
RBM39-233ENST00000482563 BOD1L1Q8NFC6 3051 aa0.48□□□□□ -2.33
RBM39-233ENST00000482563 SZT2Q5T011 3432 aa0.48□□□□□ -2.33
RBM39-233ENST00000482563 SPRR2EP22531 72 aa0.47□□□□□ -2.33
RBM39-233ENST00000482563 CFAP47Q6ZTR5 3102 aa0.47□□□□□ -2.33
RBM39-233ENST00000482563 TLN1Q9Y490 2541 aaKnown RBP0.47□□□□□ -2.33
RBM39-233ENST00000482563 DNAH12Q6ZR08 3092 aa0.47□□□□□ -2.33
RBM39-233ENST00000482563 TLN2Q9Y4G6 2542 aa0.46□□□□□ -2.34
RBM39-233ENST00000482563 LAMA1P25391 3075 aa0.46□□□□□ -2.34
RBM39-233ENST00000482563 MGAM2Q2M2H8 2515 aa0.46□□□□□ -2.34
RBM39-233ENST00000482563 EYSQ5T1H1 3165 aa0.45□□□□□ -2.34
RBM39-233ENST00000482563 SPTAN1Q13813 2472 aaKnown RBP0.45□□□□□ -2.34
RBM39-233ENST00000482563 DNAH7Q8WXX0 4024 aa0.45□□□□□ -2.34
RBM39-233ENST00000482563 HERC2O95714 4834 aa0.45□□□□□ -2.34
RBM39-233ENST00000482563 SPEGQ15772 3267 aa0.45□□□□□ -2.34
RBM39-233ENST00000482563 CSMD1Q96PZ7 3565 aa0.45□□□□□ -2.34
RBM39-233ENST00000482563 FAT1Q14517 4588 aa0.44□□□□□ -2.34
RBM39-233ENST00000482563 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
RBM39-233ENST00000482563 MKI67P46013 3256 aaKnown RBP0.43□□□□□ -2.34
RBM39-233ENST00000482563 ITPR2Q14571 2701 aa0.43□□□□□ -2.34
RBM39-233ENST00000482563 EP400Q96L91 3159 aa0.42□□□□□ -2.34
RBM39-233ENST00000482563 LEAP2Q969E1 77 aa0.42□□□□□ -2.34
RBM39-233ENST00000482563 CEP250Q9BV73 2442 aa0.42□□□□□ -2.34
RBM39-233ENST00000482563 RELNP78509 3460 aa0.41□□□□□ -2.34
RBM39-233ENST00000482563 KRTAP8-1Q8IUC2 63 aa0.41□□□□□ -2.34
RBM39-233ENST00000482563 SPRR2FQ96RM1 72 aa0.41□□□□□ -2.34
RBM39-233ENST00000482563 LRBAP50851 2863 aa0.41□□□□□ -2.34
RBM39-233ENST00000482563 NIPBLQ6KC79 2804 aaeCLIP0.4□□□□□ -2.35
RBM39-233ENST00000482563 LAMA3Q16787 3333 aa0.4□□□□□ -2.35
RBM39-233ENST00000482563 UNC80Q8N2C7 3258 aa0.39□□□□□ -2.35
RBM39-233ENST00000482563 DCHS1Q96JQ0 3298 aa0.39□□□□□ -2.35
RBM39-233ENST00000482563 USH2AO75445 5202 aa0.38□□□□□ -2.35
RBM39-233ENST00000482563 C5orf42Q9H799 3197 aa0.37□□□□□ -2.35
RBM39-233ENST00000482563 TOMM7Q9P0U1 55 aa0.37□□□□□ -2.35
RBM39-233ENST00000482563 BRCA2P51587 3418 aa0.35□□□□□ -2.35
RBM39-233ENST00000482563 KRTAP19-5Q3LI72 72 aa0.35□□□□□ -2.35
RBM39-233ENST00000482563 ASPMQ8IZT6 3477 aa0.34□□□□□ -2.35
RBM39-233ENST00000482563 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.35
RBM39-233ENST00000482563 CENPFP49454 3210 aa0.34□□□□□ -2.36
RBM39-233ENST00000482563 SPART-AS1P0CW21 52 aa0.33□□□□□ -2.36
RBM39-233ENST00000482563 CFAP54Q96N23 3096 aa0.32□□□□□ -2.36
RBM39-233ENST00000482563 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
RBM39-233ENST00000482563 USP34Q70CQ2 3546 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms