RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 SMIM11BQ8TCY0 68 aa0.53□□□□□ -2.32
USH2A-204ENST00000481786 C10orf95Q9H7T3 257 aa0.53□□□□□ -2.32
USH2A-204ENST00000481786 A0A0D9SG42 100 aa0.52□□□□□ -2.33
USH2A-204ENST00000481786 HCG22E2RYF7 251 aa0.52□□□□□ -2.33
USH2A-204ENST00000481786 NDUFC1O43677 76 aa0.52□□□□□ -2.33
USH2A-204ENST00000481786 TRACP01848 142 aa0.52□□□□□ -2.33
USH2A-204ENST00000481786 MUSTN1Q8IVN3 82 aa0.52□□□□□ -2.33
USH2A-204ENST00000481786 COPS9Q8WXC6 57 aa0.52□□□□□ -2.33
USH2A-204ENST00000481786 MRPL34Q9BQ48 92 aaKnown RBP0.52□□□□□ -2.33
USH2A-204ENST00000481786 A0A1W2PPM0 123 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 NDUFS5O43920 106 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 SNCGO76070 127 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 MT1AP04731 61 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 SRP19P09132 144 aaKnown RBP0.51□□□□□ -2.33
USH2A-204ENST00000481786 LINC00614P0C842 121 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 PLNP26678 52 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 FABP9Q0Z7S8 132 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 PMCHL1Q16048 86 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 ANKRD29Q8N6D5 301 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 TMEM254Q8TBM7 123 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 IFI27L1Q96BM0 104 aa0.51□□□□□ -2.33
USH2A-204ENST00000481786 NAA38Q9BRA0 125 aaKnown RBP0.51□□□□□ -2.33
USH2A-204ENST00000481786 A0A087WVE0 104 aa0.5□□□□□ -2.33
USH2A-204ENST00000481786 K7ERS5 55 aa0.5□□□□□ -2.33
USH2A-204ENST00000481786 CCKP06307 115 aa0.5□□□□□ -2.33
USH2A-204ENST00000481786 BATFQ16520 125 aa0.5□□□□□ -2.33
USH2A-204ENST00000481786 BVES-AS1Q5T3Y7 98 aa0.5□□□□□ -2.33
USH2A-204ENST00000481786 S100ZQ8WXG8 99 aa0.5□□□□□ -2.33
USH2A-204ENST00000481786 MT-ATP8P03928 68 aa0.49□□□□□ -2.33
USH2A-204ENST00000481786 IFITM1P13164 125 aa0.49□□□□□ -2.33
USH2A-204ENST00000481786 HSPB8Q9UJY1 196 aa0.49□□□□□ -2.33
USH2A-204ENST00000481786 MMP24-AS1A0A0U1RRL7 71 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 SMLR1H3BR10 107 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 DPM2O94777 84 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 IGKCP01834 107 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 MT-ND4LP03901 98 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 FABP2P12104 132 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 PSMB2P49721 201 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 Q6ZQT0 140 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 SLC51BQ86UW2 128 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 SEC11CQ9BY50 192 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 PRO0628Q9UI54 55 aa0.48□□□□□ -2.33
USH2A-204ENST00000481786 PEA15Q15121 130 aa0.47□□□□□ -2.33
USH2A-204ENST00000481786 C18orf32Q8TCD1 76 aa0.47□□□□□ -2.33
USH2A-204ENST00000481786 A6NED7 52 aa0.46□□□□□ -2.34
USH2A-204ENST00000481786 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
USH2A-204ENST00000481786 SCGB1D4Q6XE38 83 aa0.46□□□□□ -2.34
USH2A-204ENST00000481786 CHCHD1Q96BP2 118 aaKnown RBP0.46□□□□□ -2.34
USH2A-204ENST00000481786 YPEL4Q96NS1 127 aa0.46□□□□□ -2.34
USH2A-204ENST00000481786 VPS25Q9BRG1 176 aa0.46□□□□□ -2.34
USH2A-204ENST00000481786 LOC110117498A0A087WWA1 95 aa0.45□□□□□ -2.34
USH2A-204ENST00000481786 A0A1B0GW54 56 aa0.45□□□□□ -2.34
USH2A-204ENST00000481786 A0A1B0GX51 115 aa0.45□□□□□ -2.34
USH2A-204ENST00000481786 H0YGX0 51 aa0.45□□□□□ -2.34
USH2A-204ENST00000481786 LEPROTL1O95214 131 aa0.45□□□□□ -2.34
USH2A-204ENST00000481786 A0A1B0GV72 72 aa0.44□□□□□ -2.34
USH2A-204ENST00000481786 TMEM256-PLSCR3K7ERE1 68 aa0.44□□□□□ -2.34
USH2A-204ENST00000481786 HSBP1O75506 76 aa0.44□□□□□ -2.34
USH2A-204ENST00000481786 S100PP25815 95 aa0.44□□□□□ -2.34
USH2A-204ENST00000481786 PMCHL2Q9BQD1 86 aa0.44□□□□□ -2.34
USH2A-204ENST00000481786 ACYP1P07311 99 aa0.43□□□□□ -2.34
USH2A-204ENST00000481786 CASC2Q6XLA1 102 aa0.43□□□□□ -2.34
USH2A-204ENST00000481786 TTTY13Q9BZ97 58 aa0.43□□□□□ -2.34
USH2A-204ENST00000481786 ORMDL1Q9P0S3 153 aa0.43□□□□□ -2.34
USH2A-204ENST00000481786 FAM240AA0A1B0GVK7 77 aa0.42□□□□□ -2.34
USH2A-204ENST00000481786 C9JAW5 83 aa0.42□□□□□ -2.34
USH2A-204ENST00000481786 DNAL4O96015 105 aa0.42□□□□□ -2.34
USH2A-204ENST00000481786 CYP4F30PQ9H0H9 118 aa0.42□□□□□ -2.34
USH2A-204ENST00000481786 FABP4P15090 132 aa0.41□□□□□ -2.34
USH2A-204ENST00000481786 NREPQ16612 68 aa0.41□□□□□ -2.34
USH2A-204ENST00000481786 HIGD1BQ9P298 99 aa0.41□□□□□ -2.34
USH2A-204ENST00000481786 K7EP34 96 aa0.4□□□□□ -2.35
USH2A-204ENST00000481786 SCGB1C2P0DMR2 95 aa0.4□□□□□ -2.35
USH2A-204ENST00000481786 LINC01545Q5VT33 79 aa0.4□□□□□ -2.35
USH2A-204ENST00000481786 TP53AIP1Q9HCN2 124 aa0.4□□□□□ -2.35
USH2A-204ENST00000481786 TRAV22A0A0B4J277 110 aa0.39□□□□□ -2.35
USH2A-204ENST00000481786 SYS1-DBNDD2H3BUS1 97 aa0.39□□□□□ -2.35
USH2A-204ENST00000481786 TNP1P09430 55 aa0.39□□□□□ -2.35
USH2A-204ENST00000481786 RGS21Q2M5E4 152 aa0.39□□□□□ -2.35
USH2A-204ENST00000481786 LOC101927531A0A1B0GV80 90 aa0.38□□□□□ -2.35
USH2A-204ENST00000481786 S100A2P29034 98 aa0.38□□□□□ -2.35
USH2A-204ENST00000481786 KRTDAPP60985 99 aa0.38□□□□□ -2.35
USH2A-204ENST00000481786 ANAPC13Q9BS18 74 aa0.38□□□□□ -2.35
USH2A-204ENST00000481786 JMJD7-PLA2G4BH0Y9G9 81 aa0.36□□□□□ -2.35
USH2A-204ENST00000481786 PRO1854Q9UHT4 67 aa0.35□□□□□ -2.35
USH2A-204ENST00000481786 TMEM218A2RU14 115 aa0.34□□□□□ -2.36
USH2A-204ENST00000481786 COX6CP09669 75 aa0.34□□□□□ -2.36
USH2A-204ENST00000481786 BAALC-AS2P0C853 105 aa0.34□□□□□ -2.36
USH2A-204ENST00000481786 HIST3H2BBQ8N257 126 aa0.34□□□□□ -2.36
USH2A-204ENST00000481786 TSTD3H0UI37 97 aa0.33□□□□□ -2.36
USH2A-204ENST00000481786 HIST1H2BLQ99880 126 aa0.33□□□□□ -2.36
USH2A-204ENST00000481786 C14orf132Q9NPU4 83 aa0.33□□□□□ -2.36
USH2A-204ENST00000481786 ATOX1O00244 68 aa0.32□□□□□ -2.36
USH2A-204ENST00000481786 ATOH7Q8N100 152 aa0.32□□□□□ -2.36
USH2A-204ENST00000481786 SPTSSBQ8NFR3 76 aa0.32□□□□□ -2.36
USH2A-204ENST00000481786 TRAV7A0A075B6U4 112 aa0.31□□□□□ -2.36
USH2A-204ENST00000481786 DMAC1Q96GE9 116 aa0.31□□□□□ -2.36
USH2A-204ENST00000481786 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
USH2A-204ENST00000481786 HSBP1L1C9JCN9 74 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms