RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
GTF3C3-211ENST00000481098 TENM2Q9NT68 2774 aa2.45□□□□□ -2.02
GTF3C3-211ENST00000481098 CENPEQ02224 2701 aa2.45□□□□□ -2.02
GTF3C3-211ENST00000481098 ACANP16112 2415 aa2.45□□□□□ -2.02
GTF3C3-211ENST00000481098 CSMD2Q7Z408 3487 aa2.45□□□□□ -2.02
GTF3C3-211ENST00000481098 CRIPTQ9P021 101 aa2.44□□□□□ -2.02
GTF3C3-211ENST00000481098 BAHCC1Q9P281 2608 aa2.44□□□□□ -2.02
GTF3C3-211ENST00000481098 VWFP04275 2813 aa2.42□□□□□ -2.02
GTF3C3-211ENST00000481098 FBN1P35555 2871 aaKnown RBP2.42□□□□□ -2.02
GTF3C3-211ENST00000481098 TEP1Q99973 2627 aaKnown RBP2.41□□□□□ -2.02
GTF3C3-211ENST00000481098 PDZD2O15018 2839 aa2.41□□□□□ -2.02
GTF3C3-211ENST00000481098 TENM3Q9P273 2699 aa2.4□□□□□ -2.02
GTF3C3-211ENST00000481098 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
GTF3C3-211ENST00000481098 HELZ2Q9BYK8 2649 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-211ENST00000481098 ATRQ13535 2644 aa2.39□□□□□ -2.03
GTF3C3-211ENST00000481098 SRRM2Q9UQ35 2752 aaKnown RBP2.38□□□□□ -2.03
GTF3C3-211ENST00000481098 ZNF469Q96JG9 3925 aaPredicted RBP2.38□□□□□ -2.03
GTF3C3-211ENST00000481098 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
GTF3C3-211ENST00000481098 OTOGQ6ZRI0 2925 aa2.38□□□□□ -2.03
GTF3C3-211ENST00000481098 HECTD1Q9ULT8 2610 aa2.38□□□□□ -2.03
GTF3C3-211ENST00000481098 USP24Q9UPU5 2620 aa2.38□□□□□ -2.03
GTF3C3-211ENST00000481098 TENM4Q6N022 2769 aa2.37□□□□□ -2.03
GTF3C3-211ENST00000481098 NSD1Q96L73 2696 aaPredicted RBP2.37□□□□□ -2.03
GTF3C3-211ENST00000481098 MAST4O15021 2626 aa2.37□□□□□ -2.03
GTF3C3-211ENST00000481098 CUBNO60494 3623 aa2.36□□□□□ -2.03
GTF3C3-211ENST00000481098 FASNP49327 2511 aaKnown RBP2.36□□□□□ -2.03
GTF3C3-211ENST00000481098 TENM1Q9UKZ4 2725 aa2.35□□□□□ -2.03
GTF3C3-211ENST00000481098 PKD1L1Q8TDX9 2849 aa2.35□□□□□ -2.03
GTF3C3-211ENST00000481098 FLNBO75369 2602 aaKnown RBP2.34□□□□□ -2.03
GTF3C3-211ENST00000481098 S4R3F8 94 aa2.34□□□□□ -2.03
GTF3C3-211ENST00000481098 DNAH3Q8TD57 4116 aa2.34□□□□□ -2.03
GTF3C3-211ENST00000481098 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
GTF3C3-211ENST00000481098 A0A0D9SG42 100 aa2.32□□□□□ -2.04
GTF3C3-211ENST00000481098 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 HUWE1Q7Z6Z7 4374 aaKnown RBP2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 DNAH8Q96JB1 4490 aa2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 M0QZ58 72 aa2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 TRRAPQ9Y4A5 3859 aa2.31□□□□□ -2.04
GTF3C3-211ENST00000481098 DNAH10Q8IVF4 4471 aa2.3□□□□□ -2.04
GTF3C3-211ENST00000481098 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
GTF3C3-211ENST00000481098 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
GTF3C3-211ENST00000481098 ITPR2Q14571 2701 aa2.3□□□□□ -2.04
GTF3C3-211ENST00000481098 ANK2Q01484 3957 aa2.29□□□□□ -2.04
GTF3C3-211ENST00000481098 LYSTQ99698 3801 aa2.29□□□□□ -2.04
GTF3C3-211ENST00000481098 NOTCH1P46531 2555 aa2.28□□□□□ -2.04
GTF3C3-211ENST00000481098 C9orf92A6NGG3 77 aa2.28□□□□□ -2.04
GTF3C3-211ENST00000481098 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
GTF3C3-211ENST00000481098 VPS13DQ5THJ4 4388 aa2.28□□□□□ -2.04
GTF3C3-211ENST00000481098 TGP01266 2768 aa2.28□□□□□ -2.04
GTF3C3-211ENST00000481098 NBEAL1Q6ZS30 2694 aa2.28□□□□□ -2.04
GTF3C3-211ENST00000481098 PLAC4Q8WY50 150 aa2.26□□□□□ -2.05
GTF3C3-211ENST00000481098 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
GTF3C3-211ENST00000481098 R4GN34 69 aa2.25□□□□□ -2.05
GTF3C3-211ENST00000481098 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
GTF3C3-211ENST00000481098 COL6A5A8TX70 2615 aa2.24□□□□□ -2.05
GTF3C3-211ENST00000481098 STAB1Q9NY15 2570 aa2.22□□□□□ -2.05
GTF3C3-211ENST00000481098 HECTD4Q9Y4D8 3996 aa2.22□□□□□ -2.05
GTF3C3-211ENST00000481098 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
GTF3C3-211ENST00000481098 CMYA5Q8N3K9 4069 aa2.21□□□□□ -2.06
GTF3C3-211ENST00000481098 MGAM2Q2M2H8 2515 aa2.21□□□□□ -2.06
GTF3C3-211ENST00000481098 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
GTF3C3-211ENST00000481098 COL7A1Q02388 2944 aa2.2□□□□□ -2.06
GTF3C3-211ENST00000481098 CSMD3Q7Z407 3707 aa2.19□□□□□ -2.06
GTF3C3-211ENST00000481098 FRAS1Q86XX4 4008 aa2.19□□□□□ -2.06
GTF3C3-211ENST00000481098 PRKDCP78527 4128 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-211ENST00000481098 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-211ENST00000481098 DNAH7Q8WXX0 4024 aa2.17□□□□□ -2.06
GTF3C3-211ENST00000481098 SACSQ9NZJ4 4579 aa2.16□□□□□ -2.06
GTF3C3-211ENST00000481098 DNAH11Q96DT5 4516 aa2.16□□□□□ -2.06
GTF3C3-211ENST00000481098 DNAH6Q9C0G6 4158 aa2.15□□□□□ -2.07
GTF3C3-211ENST00000481098 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
GTF3C3-211ENST00000481098 KRTAP10-4P60372 401 aaPredicted RBP2.13□□□□□ -2.07
GTF3C3-211ENST00000481098 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
GTF3C3-211ENST00000481098 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
GTF3C3-211ENST00000481098 FBN3Q75N90 2809 aa2.11□□□□□ -2.07
GTF3C3-211ENST00000481098 PRO2289Q9P1D8 64 aa2.1□□□□□ -2.07
GTF3C3-211ENST00000481098 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
GTF3C3-211ENST00000481098 PKHD1L1Q86WI1 4243 aa2.1□□□□□ -2.07
GTF3C3-211ENST00000481098 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
GTF3C3-211ENST00000481098 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.08
GTF3C3-211ENST00000481098 INE1O15225 51 aa2.08□□□□□ -2.08
GTF3C3-211ENST00000481098 SMR3BP02814 79 aaPredicted RBP2.08□□□□□ -2.08
GTF3C3-211ENST00000481098 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
GTF3C3-211ENST00000481098 KMT2AQ03164 3969 aa2.06□□□□□ -2.08
GTF3C3-211ENST00000481098 TNP1P09430 55 aa2.05□□□□□ -2.08
GTF3C3-211ENST00000481098 PKD1P98161 4303 aa2.03□□□□□ -2.08
GTF3C3-211ENST00000481098 Q5VSD8 79 aa2.03□□□□□ -2.08
GTF3C3-211ENST00000481098 PKHD1P08F94 4074 aa2.03□□□□□ -2.08
GTF3C3-211ENST00000481098 FAT2Q9NYQ8 4349 aa2.02□□□□□ -2.09
GTF3C3-211ENST00000481098 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
GTF3C3-211ENST00000481098 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
GTF3C3-211ENST00000481098 FAT3Q8TDW7 4589 aa1.98□□□□□ -2.09
GTF3C3-211ENST00000481098 TNXBP22105 4242 aa1.97□□□□□ -2.09
GTF3C3-211ENST00000481098 MYCBP2O75592 4640 aa1.96□□□□□ -2.1
GTF3C3-211ENST00000481098 DYNC1H1Q14204 4646 aaKnown RBP1.96□□□□□ -2.1
GTF3C3-211ENST00000481098 FAT1Q14517 4588 aa1.95□□□□□ -2.1
GTF3C3-211ENST00000481098 HSPG2P98160 4391 aa1.95□□□□□ -2.1
GTF3C3-211ENST00000481098 MT1HL1P0DM35 61 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms